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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 5073
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whem_1015_a01r 2012 3' Dormant seed with water absorption 611bp Contig32442       PREDICTED:40SribosomalproteinSA-like[Brachypodiumdistachyon] 198 1.27516e-48
whem_11015_a01r 2012 3' Dormant seed with water absorption 532bp       PREDICTED:3-hydroxy-3-methylglutaryl-coenzymeAreductase3-like[Brachypodiumdistachyon] 93 2.24062e-17
whem_12015_a01r 2012 3' Dormant seed with water absorption 89bp Contig25975       predictedprotein[Hordeumvulgaresubsp.vulgare] 63 2.88168e-08
whem_14015_a01r 2012 3' Dormant seed with water absorption 632bp Contig21088       ChainM,LocalizationOfTheSmallSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 304 1.36667e-80
whem_17015_a01r 2012 3' Dormant seed with water absorption 70bp       PREDICTED:DNA-directedRNApolymeraseIsubunitRPA2[Brachypodiumdistachyon] 49 0.000400837
whem_20015_a01r 2012 3' Dormant seed with water absorption 616bp Contig24345       predictedprotein[Hordeumvulgaresubsp.vulgare] 270 2.71698e-70
whem_3015_a01r 2012 3' Dormant seed with water absorption 317bp       gamma-thionin[Hordeumvulgaresubsp.vulgare] 141 1.10849e-31
whem_4015_a01r 2012 3' Dormant seed with water absorption 443bp       gamma-thionin[Hordeumvulgaresubsp.vulgare] 142 3.80114e-32
whem_5015_a01r 2012 3' Dormant seed with water absorption 169bp       SNF1-relatedproteinkinase[Hordeumvulgaresubsp.vulgare] 120 1.98703e-25
whem_6015_a01r 2012 3' Dormant seed with water absorption 510bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 265 3.84243e-69
whem_9015_a01r 2012 3' Dormant seed with water absorption 350bp Contig19506       predictedprotein[Hordeumvulgaresubsp.vulgare] 103 2.54359e-20
whem_10015_a02r 2012 3' Dormant seed with water absorption 257bp Contig26608       unknown[Lotusjaponicus] 35 6.55939
whem_1015_a02r 2012 3' Dormant seed with water absorption 628bp Contig28346       PREDICTED:40SribosomalproteinS3a-like[Brachypodiumdistachyon] 262 5.98441e-68
whem_11015_a02r 2012 3' Dormant seed with water absorption 578bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 297 1.32689e-78
whem_12015_a02r 2012 3' Dormant seed with water absorption 513bp       PREDICTED:ubiquitin-60SribosomalproteinL40-2-like[Brachypodiumdistachyon] 262 4.24831e-68
whem_15015_a02r 2012 3' Dormant seed with water absorption 688bp Contig10014       heatshockprotein90[Triticumaestivum] 355 6.37912e-96
whem_18015_a02r 2012 3' Dormant seed with water absorption 673bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 4.13267e-97
whem_19015_a02r 2012 3' Dormant seed with water absorption 627bp       LOC100280744precursor[Zeamays] 120 4.79704e-25
whem_20015_a02r 2012 3' Dormant seed with water absorption 554bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 4.18892e-68
whem_5015_a02r 2012 3' Dormant seed with water absorption 465bp       sphingosinekinase-2variant[Homosapiens] 41 0.155163
whem_6015_a02r 2012 3' Dormant seed with water absorption 605bp Contig16469       putativeglycoprotein3-alpha-L-fucosyltransferase[Triticumaestivum] 332 5.49396e-89
whem_7015_a02r 2012 3' Dormant seed with water absorption 537bp Contig7933       fructose-bisphosphatealdolase[Triticumaestivum] 215 6.96493e-54
whem_10016_a03r 2012 3' Dormant seed with water absorption 619bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 277 1.72578e-72
whem_1016_a03r 2012 3' Dormant seed with water absorption 372bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 250 1.29158e-64
whem_11016_a03r 2012 3' Dormant seed with water absorption 667bp Contig8973       putativeeukaryoticpeptidechainreleasefactorsubunit1-3[Triticumaestivum] 233 4.48847e-59
whem_12016_a03r 2012 3' Dormant seed with water absorption 585bp       HypotheticalproteinGL50803_17577[GiardialambliaATCC50803] 39 0.673366
whem_14016_a03r 2012 3' Dormant seed with water absorption 545bp Contig10339       predictedprotein[Hordeumvulgaresubsp.vulgare] 266 3.57014e-69
whem_16016_a03r 2012 3' Dormant seed with water absorption 666bp Contig1216       PREDICTED:DNArepairproteinrecAhomolog1,chloroplastic-likeisoform2[Brachypodiumdistachyon] 297 1.93795e-78
whem_18016_a03r 2012 3' Dormant seed with water absorption 612bp       PREDICTED:golgincandidate6-like[Brachypodiumdistachyon] 198 9.90509e-49
whem_19016_a03r 2012 3' Dormant seed with water absorption 599bp Contig11598       Tar1p[Medicagotruncatula] 104 8.78428e-44
whem_2016_a03r 2012 3' Dormant seed with water absorption 605bp       wiskott-Aldrichsyndromeprotein[ExophialadermatitidisNIH/UT8656] 41 0.252985
whem_4016_a03r 2012 3' Dormant seed with water absorption 630bp Contig6780       predictedprotein[Hordeumvulgaresubsp.vulgare] 355 6.78382e-96
whem_5016_a03r 2012 3' Dormant seed with water absorption 498bp       wali6[Triticumaestivum] 121 6.78439e-26
whem_6016_a03r 2012 3' Dormant seed with water absorption 416bp       predictedprotein[LaccariabicolorS238N-H82] 43 0.0234151
whem_7016_a03r 2012 3' Dormant seed with water absorption 595bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 252 6.93495e-65
whem_9016_a03r 2012 3' Dormant seed with water absorption 497bp Contig20391       predictedprotein[Hordeumvulgaresubsp.vulgare] 212 5.00804e-53
whem_10016_a04r 2012 3' Dormant seed with water absorption 593bp Contig10558       predictedprotein[Hordeumvulgaresubsp.vulgare] 229 3.68577e-58
whem_1016_a04r 2012 3' Dormant seed with water absorption 528bp Contig30954       PREDICTED:glutathioneS-transferasetheta-1-like[Brachypodiumdistachyon] 259 2.30836e-67
whem_12016_a04r 2012 3' Dormant seed with water absorption 586bp Contig12481       PREDICTED:carbamoyl-phosphatesynthasesmallchain-like[Brachypodiumdistachyon] 298 6.15803e-79
whem_14016_a04r 2012 3' Dormant seed with water absorption 352bp Contig8091       translationinitiationfactor[Triticumaestivum] 118 7.6408e-25
whem_15016_a04r 2012 3' Dormant seed with water absorption 699bp       hypotheticalprotein[OryzasativaIndicaGroup] 368 7.51664e-100
whem_16016_a04r 2012 3' Dormant seed with water absorption 649bp Contig10868       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 348 6.82459e-94
whem_18016_a04r 2012 3' Dormant seed with water absorption 585bp Contig4614       putativehighmobilitygroupprotein[Triticumaestivum] 217 1.38144e-54
whem_19016_a04r 2012 3' Dormant seed with water absorption 197bp       PREDICTED:60SribosomalproteinL24-like[Brachypodiumdistachyon] 46 0.00282163
whem_20016_a04r 2012 3' Dormant seed with water absorption 563bp Contig9458       PREDICTED:uncharacterizedproteinLOC100830908[Brachypodiumdistachyon] 177 1.43522e-42
whem_2016_a04r 2012 3' Dormant seed with water absorption 582bp       PREDICTED:probablehelicasesenataxin-like[Brachypodiumdistachyon] 61 2.1257e-07
whem_4016_a04r 2012 3' Dormant seed with water absorption 644bp Contig37051       predictedprotein[Hordeumvulgaresubsp.vulgare] 259 4.0663e-67
whem_5016_a04r 2012 3' Dormant seed with water absorption 621bp Contig15965       coronatineinsensitive2-likeprotein[Triticumaestivum] 276 3.84463e-72
whem_6016_a04r 2012 3' Dormant seed with water absorption 338bp       dipeptide-bindingproteinDppE[Carnobacteriumsp.17-4] 36 4.89191
whem_8016_a04r 2012 3' Dormant seed with water absorption 34bp            
whem_9016_a04r 2012 3' Dormant seed with water absorption 444bp Contig21407       RecName:Full=ThioredoxinH-type;Short=Trx-H;AltName:Full=TrxTa 243 1.58226e-62
whem_10031_a05r 2012 3' Dormant seed with water absorption 544bp       putativehistoneacetyltransferaseGCN5[Hordeumvulgare] 195 4.53724e-48
whem_11031_a05r 2012 3' Dormant seed with water absorption 596bp       PREDICTED:40SribosomalproteinS3a-like[Brachypodiumdistachyon] 312 3.36225e-83
whem_14031_a05r 2012 3' Dormant seed with water absorption 499bp       PREDICTED:uncharacterizedproteinLOC100828496[Brachypodiumdistachyon] 57 2.06173e-06
whem_15031_a05r 2012 3' Dormant seed with water absorption 74bp Contig22386            
whem_16031_a05r 2012 3' Dormant seed with water absorption 601bp Contig18331       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 343 2.34754e-92
whem_18031_a05r 2012 3' Dormant seed with water absorption 562bp Contig3819       predictedprotein[Hordeumvulgaresubsp.vulgare] 304 7.78454e-81
whem_19031_a05r 2012 3' Dormant seed with water absorption 571bp Contig2853       GF13768[Drosophilaananassae] 44 0.0147135
whem_20031_a05r 2012 3' Dormant seed with water absorption 645bp Contig9916       predictedprotein[Hordeumvulgaresubsp.vulgare] 237 2.82254e-60
whem_2031_a05r 2012 3' Dormant seed with water absorption 362bp       glutathionetransferase[Triticumaestivum] 86 3.16812e-15
whem_3031_a05r 2012 3' Dormant seed with water absorption 568bp Contig21063       predictedprotein[Hordeumvulgaresubsp.vulgare] 225 6.08217e-57
whem_4031_a05r 2012 3' Dormant seed with water absorption 547bp Contig20515       ChainE,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 294 7.3234e-78
whem_5031_a05r 2012 3' Dormant seed with water absorption 533bp       ChainE,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 279 3.84394e-73
whem_6031_a05r 2012 3' Dormant seed with water absorption 503bp Contig1247       PREDICTED:DNA-directedRNApolymeraseIIsubunitRPB4-like[Brachypodiumdistachyon] 172 4.35688e-41
whem_8031_a05r 2012 3' Dormant seed with water absorption 451bp Contig35837       PREDICTED:40SribosomalproteinS27-like[Brachypodiumdistachyon] 184 1.12452e-44
whem_9031_a05r 2012 3' Dormant seed with water absorption 677bp Contig11877       hypotheticalproteinTCSYLVIO_1831[Trypanosomacruzi] 37 2.81763
whem_1031_a06r 2012 3' Dormant seed with water absorption 571bp Contig11742       putativesucrosesynthase2,partial[Loliumperenne] 252 3.62097e-65
whem_11031_a06r 2012 3' Dormant seed with water absorption 587bp Contig4726       predictedprotein[Hordeumvulgaresubsp.vulgare] 308 7.89928e-82
whem_12031_a06r 2012 3' Dormant seed with water absorption 400bp Contig8685       alpha-tubulin[Alopecurusaequalis] 185 5.08648e-45
whem_14031_a06r 2012 3' Dormant seed with water absorption 584bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 301 9.50047e-80
whem_15031_a06r 2012 3' Dormant seed with water absorption 656bp       PREDICTED:ELMOdomain-containingproteinA-like[Brachypodiumdistachyon] 273 3.73395e-71
whem_16031_a06r 2012 3' Dormant seed with water absorption 574bp Contig23469       predictedprotein[Hordeumvulgaresubsp.vulgare] 297 9.98741e-79
whem_18031_a06r 2012 3' Dormant seed with water absorption 585bp Contig10295       predictedprotein[Hordeumvulgaresubsp.vulgare] 308 5.95072e-82
whem_2031_a06r 2012 3' Dormant seed with water absorption 406bp Contig1724       predictedprotein[Hordeumvulgaresubsp.vulgare] 190 1.56827e-46
whem_3031_a06r 2012 3' Dormant seed with water absorption 277bp Contig10692       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 99 3.62172e-19
whem_4031_a06r 2012 3' Dormant seed with water absorption 626bp Contig1217       PREDICTED:eukaryoticinitiationfactor4A-1-like[Brachypodiumdistachyon] 186 5.37779e-45
whem_5031_a06r 2012 3' Dormant seed with water absorption 512bp Contig25822       PREDICTED:dnaJproteinhomolog[Brachypodiumdistachyon] 249 3.7217e-64
whem_6031_a06r 2012 3' Dormant seed with water absorption 652bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 48 0.00147781
whem_7031_a06r 2012 3' Dormant seed with water absorption 593bp Contig12900       predictedprotein[Hordeumvulgaresubsp.vulgare] 309 4.78038e-82
whem_8031_a06r 2012 3' Dormant seed with water absorption 283bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 37 1.67219
whem_1032_a07r 2012 3' Dormant seed with water absorption 585bp       guanylylcyclase[Triticumaestivum] 180 3.19214e-43
whem_13032_a07r 2012 3' Dormant seed with water absorption 572bp Contig26756       hypotheticalproteinOsJ_03983[OryzasativaJaponicaGroup] 296 2.1866e-78
whem_17032_a07r 2012 3' Dormant seed with water absorption 474bp Contig1110       hypotheticalproteinMYCGRDRAFT_107063[MycosphaerellagraminicolaIPO323] 43 0.0237263
whem_19032_a07r 2012 3' Dormant seed with water absorption 607bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 189 5.83752e-46
whem_20032_a07r 2012 3' Dormant seed with water absorption 598bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 227 2.41481e-57
whem_2032_a07r 2012 3' Dormant seed with water absorption 435bp Contig19690       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 9.08517e-55
whem_5032_a07r 2012 3' Dormant seed with water absorption 552bp Contig4599       predictedprotein[Hordeumvulgaresubsp.vulgare] 283 2.24911e-74
whem_6032_a07r 2012 3' Dormant seed with water absorption 36bp            
whem_7032_a07r 2012 3' Dormant seed with water absorption 239bp Contig17073       hypotheticalproteinPANDA_016137[Ailuropodamelanoleuca] 38 0.995228
whem_8032_a07r 2012 3' Dormant seed with water absorption 141bp Contig20515            
whem_9032_a07r 2012 3' Dormant seed with water absorption 382bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 146 3.40344e-33
whem_10032_a08r 2012 3' Dormant seed with water absorption 601bp Contig10558       predictedprotein[Hordeumvulgaresubsp.vulgare] 234 1.51254e-59
whem_11032_a08r 2012 3' Dormant seed with water absorption 606bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 187 2.85452e-45
whem_12032_a08r 2012 3' Dormant seed with water absorption 134bp Contig938       putativesenescence-associatedprotein[Pisumsativum] 85 7.06035e-15
whem_14032_a08r 2012 3' Dormant seed with water absorption 602bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 172 9.36077e-41
whem_15032_a08r 2012 3' Dormant seed with water absorption 605bp Contig7431       Chain4,StructureOfSignalRecognitionParticleReceptor(Sr)InComplexWithSignalRecognitionParticle(Srp)AndRibosomeNascentChainComplex 297 1.95857e-78
whem_16032_a08r 2012 3' Dormant seed with water absorption 559bp Contig3944       cobalamin-independentmethioninesynthase[Triticummonococcum] 260 1.65301e-67
whem_19032_a08r 2012 3' Dormant seed with water absorption 493bp Contig9208       PREDICTED:40SribosomalproteinS20-like[Brachypodiumdistachyon] 245 3.144e-63
whem_20032_a08r 2012 3' Dormant seed with water absorption 627bp Contig7626       PREDICTED:UDP-glucuronicaciddecarboxylase1-like[Brachypodiumdistachyon] 274 1.14969e-71
whem_2032_a08r 2012 3' Dormant seed with water absorption 587bp Contig5989       PREDICTED:nucleolarGTP-bindingprotein1-like[Brachypodiumdistachyon] 181 1.11511e-43
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