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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 5159
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whe_1001_a01r 2012 3' Seed DPA10 572bp       gamma-gliadin[Aegilopssearsii] 298 5.75422e-79
whe_10001_a01r 2012 3' Seed DPA10 456bp Contig10736       predictedprotein[Hordeumvulgaresubsp.vulgare] 243 2.03099e-62
whe_11001_a01r 2012 3' Seed DPA10 543bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 251 9.14307e-65
whe_18001_a01r 2012 3' Seed DPA10 417bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 179 2.73405e-43
whe_22002_a01r 2012 3' Seed DPA10 610bp Contig1248       PREDICTED:formatedehydrogenase1,mitochondrial-like[Brachypodiumdistachyon] 348 7.51868e-94
whe_24001_a01r 2012 3' Seed DPA10 405bp       gammagliadin[Triticumaestivum] 160 1.73795e-37
whe_25001_a01r 2012 3' Seed DPA10 522bp Contig264       predictedprotein[Hordeumvulgaresubsp.vulgare] 167 1.4883e-39
whe_7001_a01r 2012 3' Seed DPA10 439bp       gammaprolamin[Aegilopsuniaristata] 224 7.40036e-57
whe_8001_a01r 2012 3' Seed DPA10 388bp Contig4291       RecName:Full=Beta-amylase;AltName:Full=1,4-alpha-D-glucanmaltohydrolase 175 3.96308e-42
whe_9002_a01r 2012 3' Seed DPA10 504bp       hypotheticalproteinVITISV_026777[Vitisvinifera] 37 2.18752
whe_5001_a01r 2012 3' Seed DPA10 461bp Contig12292       saltstress-responsiveprotein[Triticumaestivum] 242 2.62938e-62
whe_1017_a02r 2012 3' Seed DPA10 361bp Contig34494       expansinEXPA7[Triticumaestivum] 133 1.73036e-29
whe_3017_a02r 2012 3' Seed DPA10 470bp       hypotheticalproteinOsJ_08883[OryzasativaJaponicaGroup] 131 6.65423e-29
whe_10017_a02r 2012 3' Seed DPA10 494bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 165 4.13486e-39
whe_11017_a02r 2012 3' Seed DPA10 420bp Contig4261       Os01g0679700[OryzasativaJaponicaGroup] 190 1.21474e-46
whe_15018_a02r 2012 3' Seed DPA10 460bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Cynosuruscristatus] 321 7.63077e-86
whe_17017_a02r 2012 3' Seed DPA10 198bp            
whe_18017_a02r 2012 3' Seed DPA10 447bp Contig737       hypotheticalproteinPGTG_17879[Pucciniagraminisf.sp.triticiCRL75-36-700-3] 62 6.47295e-08
whe_20017_a02r 2012 3' Seed DPA10 534bp       hypotheticalproteinOsJ_29492[OryzasativaJaponicaGroup] 71 9.32056e-11
whe_21017_a02r 2012 3' Seed DPA10 85bp            
whe_22018_a02r 2012 3' Seed DPA10 366bp       alpha-gliadin[Thinopyrumbessarabicum] 156 3.24303e-36
whe_25017_a02r 2012 3' Seed DPA10 368bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 50 0.000249641
whe_4017_a02r 2012 3' Seed DPA10 127bp Contig27600            
whe_8017_a02r 2012 3' Seed DPA10 207bp       gamma-gliadin[Aegilopsspeltoides] 113 1.86108e-23
whe_9018_a02r 2012 3' Seed DPA10 480bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 155 7.2095e-36
whe_12018_a02r 2012 3' Seed DPA10 275bp Contig815       putativeTdLSC1protein[Triticumdurum] 104 1.12585e-20
whe_5017_a02r 2012 3' Seed DPA10 127bp Contig28149            
whe_1033_a03r 2012 3' Seed DPA10 551bp       Chaink,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 224 9.49333e-57
whe_3033_a03r 2012 3' Seed DPA10 488bp Contig3137       thioredoxinH[Triticumaestivum] 240 1.02067e-61
whe_19034_a03r 2012 3' Seed DPA10 379bp Contig3467       predictedprotein[Hordeumvulgaresubsp.vulgare] 78 6.69971e-13
whe_20033_a03r 2012 3' Seed DPA10 562bp Contig15046       RecName:Full=UTP--glucose-1-phosphateuridylyltransferase;AltName:Full=UDP-glucosepyrophosphorylase;Short=UDPGP;Short=UGPase 269 4.64762e-70
whe_2033_a03r 2012 3' Seed DPA10 509bp Contig2777       RecName:Full=Alanineaminotransferase2;Short=ALAAT-2;AltName:Full=Glutamatepyruvatetransaminase2;Short=GPT;AltName:Full=Glutamic--alaninetransaminase2;AltName:Full=Glutamic--pyruvictransaminase2 266 2.95587e-69
whe_22034_a03r 2012 3' Seed DPA10 245bp Contig37073       PREDICTED:uncharacterizedRNA-bindingproteinC23E6.01c-like[Brachypodiumdistachyon] 37 2.202
whe_23033_a03r 2012 3' Seed DPA10 430bp Contig816       unknown[Medicagotruncatula] 44 0.0106306
whe_25033_a03r 2012 3' Seed DPA10 535bp       gamma-gliadin[Triticumaestivum] 292 4.48324e-77
whe_4033_a03r 2012 3' Seed DPA10 545bp       nucleartranscriptionfactorYsubunitC10[Triticummonococcum] 242 3.23656e-62
whe_7033_a03r 2012 3' Seed DPA10 498bp Contig35391       RecName:Full=Triosephosphateisomerase,cytosolic;Short=TIM;Short=Triose-phosphateisomerase 220 1.07811e-55
whe_12034_a03r 2012 3' Seed DPA10 464bp Contig5836       mitochondrialsuperoxidedismutase[Triticumaestivum] 206 2.80101e-51
whe_1049_a04r 2012 3' Seed DPA10 81bp            
whe_10049_a04r 2012 3' Seed DPA10 443bp       PREDICTED:LOWQUALITYPROTEIN:proteinSRG1-like[Brachypodiumdistachyon] 188 7.88917e-46
whe_11049_a04r 2012 3' Seed DPA10 34bp            
whe_15050_a04r 2012 3' Seed DPA10 523bp       serpin1[Triticumaestivum] 278 6.12916e-73
whe_17049_a04r 2012 3' Seed DPA10 532bp Contig9882       GTPaseSAR1[Triticumaestivum] 232 5.38872e-59
whe_20049_a04r 2012 3' Seed DPA10 396bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 191 9.34547e-47
whe_2049_a04r 2012 3' Seed DPA10 504bp Contig3161       predictedprotein[Hordeumvulgaresubsp.vulgare] 280 1.48361e-73
whe_21049_a04r 2012 3' Seed DPA10 340bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 183 1.44703e-44
whe_7049_a04r 2012 3' Seed DPA10 337bp       gamma-gliadin[Aegilopsspeltoides] 113 1.84603e-23
whe_8049_a04r 2012 3' Seed DPA10 468bp Contig9589       predictedprotein[Hordeumvulgaresubsp.vulgare] 123 3.10476e-26
whe_12050_a04r 2012 3' Seed DPA10 228bp Contig16755       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 102 4.3557e-20
whe_5049_a04r 2012 3' Seed DPA10 485bp       27kprotein[Triticumaestivum] 237 1.13362e-60
whe_1065_a05r 2012 3' Seed DPA10 545bp       hypotheticalproteinDAPPUDRAFT_104595[Daphniapulex] 37 1.58128
whe_11065_a05r 2012 3' Seed DPA10 490bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 182 3.29866e-44
whe_13065_a05r 2012 3' Seed DPA10 56bp            
whe_14065_a05r 2012 3' Seed DPA10 56bp            
whe_15066_a05r 2012 3' Seed DPA10 473bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 127 1.24935e-27
whe_17065_a05r 2012 3' Seed DPA10 258bp       PREDICTED:SH3domain-containingkinase-bindingprotein1-like[Strongylocentrotuspurpuratus] 39 0.452674
whe_18065_a05r 2012 3' Seed DPA10 258bp       PREDICTED:SH3domain-containingkinase-bindingprotein1-like[Strongylocentrotuspurpuratus] 39 0.452674
whe_2065_a05r 2012 3' Seed DPA10 515bp       RecName:Full=Puroindoline-B;Flags:Precursor 323 1.21865e-86
whe_24065_a05r 2012 3' Seed DPA10 578bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 239 4.28829e-61
whe_25065_a05r 2012 3' Seed DPA10 494bp Contig817       PREDICTED:UPF0183proteinAt3g51130-like[Brachypodiumdistachyon] 224 9.79611e-57
whe_4065_a05r 2012 3' Seed DPA10 572bp Contig819       predictedprotein[Hordeumvulgaresubsp.vulgare] 211 9.2509e-53
whe_6065_a05r 2012 3' Seed DPA10 450bp Contig4101       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 6.80438e-66
whe_8065_a05r 2012 3' Seed DPA10 98bp            
whe_9066_a05r 2012 3' Seed DPA10 421bp Contig6771       predictedprotein[Hordeumvulgaresubsp.vulgare] 230 1.80679e-58
whe_12066_a05r 2012 3' Seed DPA10 427bp       cytosolicglutathionereductase[Triticummonococcum] 202 4.01757e-50
whe_5065_a05r 2012 3' Seed DPA10 425bp Contig820       ProteinW02G9.10[Caenorhabditiselegans] 35 6.50404
whe_1081_a06r 2012 3' Seed DPA10 486bp       endospermtransfercellspecificPR60precursor[Triticumaestivum] 226 2.61343e-57
whe_3081_a06r 2012 3' Seed DPA10 414bp       acyl-homoserinelactoneacylaseQuiP[gammaproteobacteriumHTCC5015] 35 8.36274
whe_11081_a06r 2012 3' Seed DPA10 190bp       pleiomorphicadenomaprotein-like2[Oneirodesmacrosteus] 35 0.000875617
whe_13081_a06r 2012 3' Seed DPA10 412bp Contig2173       predictedprotein[Hordeumvulgaresubsp.vulgare] 163 1.55896e-38
whe_14081_a06r 2012 3' Seed DPA10 412bp Contig2173       predictedprotein[Hordeumvulgaresubsp.vulgare] 163 1.55896e-38
whe_15082_a06r 2012 3' Seed DPA10 470bp Contig31652       predictedprotein[Hordeumvulgaresubsp.vulgare] 232 2.76988e-59
whe_2081_a06r 2012 3' Seed DPA10 412bp       acyl-homoserinelactoneacylaseQuiP[gammaproteobacteriumHTCC5015] 35 8.36274
whe_21081_a06r 2012 3' Seed DPA10 463bp Contig8854       PREDICTED:eukaryoticinitiationfactor4A-1-like[Brachypodiumdistachyon] 125 4.81116e-27
whe_22082_a06r 2012 3' Seed DPA10 516bp       predictedprotein[LodderomyceselongisporusNRRLYB-4239] 49 0.000443606
whe_24081_a06r 2012 3' Seed DPA10 507bp       alpha-amylaseinhibitorCM16subunit[Triticummacha] 277 7.55189e-73
whe_25081_a06r 2012 3' Seed DPA10 524bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 215 3.73572e-54
whe_6081_a06r 2012 3' Seed DPA10 157bp Contig3347       PREDICTED:60SribosomalproteinL15-like[Brachypodiumdistachyon] 52 6.73017e-05
whe_5081_a06r 2012 3' Seed DPA10 408bp Contig12752       cathepsinB[Triticumaestivum] 233 1.61539e-59
whe_1001_a07r 2012 3' Seed DPA10 478bp       RecName:Full=Alpha-amylase/trypsininhibitorCM2;AltName:Full=Chloroform/methanol-solubleproteinCM2;Flags:Precursor 278 5.67213e-73
whe_10001_a07r 2012 3' Seed DPA10 462bp Contig10736       predictedprotein[Hordeumvulgaresubsp.vulgare] 245 5.44121e-63
whe_11001_a07r 2012 3' Seed DPA10 562bp       NuclearporecomplexproteinNup88[Heterocephalusglaber] 39 0.458589
whe_15002_a07r 2012 3' Seed DPA10 301bp       RecName:Full=DefensinTk-AMP-D5 108 7.82796e-22
whe_19002_a07r 2012 3' Seed DPA10 87bp Contig9517            
whe_20001_a07r 2012 3' Seed DPA10 516bp Contig30775       cytosolicmalatedehydrogenase[Triticumaestivum] 250 1.34309e-64
whe_25001_a07r 2012 3' Seed DPA10 515bp Contig1132       PREDICTED:40SribosomalproteinS14-like[Brachypodiumdistachyon] 233 2.16614e-59
whe_4001_a07r 2012 3' Seed DPA10 318bp       gammaprolamin[Pseudoroegneriastipifolia] 133 3.01872e-29
whe_6001_a07r 2012 3' Seed DPA10 286bp Contig821       PREDICTED:60SribosomalproteinL27a-3-like[Brachypodiumdistachyon] 94 1.50543e-17
whe_7001_a07r 2012 3' Seed DPA10 433bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 171 7.49862e-41
whe_12002_a07r 2012 3' Seed DPA10 379bp Contig1884       hypotheticalproteinSERLA73DRAFT_108219[Serpulalacrymansvar.lacrymansS7.3] 38 0.999479
whe_5001_a07r 2012 3' Seed DPA10 31bp            
whe_10017_a08r 2012 3' Seed DPA10 507bp Contig28411       translationally-controlledtumorprotein[Triticumaestivum] 242 4.59221e-62
whe_11017_a08r 2012 3' Seed DPA10 582bp Contig8685       alphatubulin-2A[Triticumaestivum] 314 1.39315e-83
whe_13017_a08r 2012 3' Seed DPA10 166bp Contig10692       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 92 4.45105e-17
whe_14017_a08r 2012 3' Seed DPA10 166bp Contig10692       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 92 4.45105e-17
whe_16017_a08r 2012 3' Seed DPA10 241bp Contig19918       PREDICTED:PGR5-likeprotein1A,chloroplastic-like[Brachypodiumdistachyon] 62 6.41396e-08
whe_18017_a08r 2012 3' Seed DPA10 492bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 236 2.49114e-60
whe_2017_a08r 2012 3' Seed DPA10 190bp Contig8520            
whe_22018_a08r 2012 3' Seed DPA10 589bp Contig15046       RecName:Full=UTP--glucose-1-phosphateuridylyltransferase;AltName:Full=UDP-glucosepyrophosphorylase;Short=UDPGP;Short=UGPase 256 3.61977e-66
whe_23017_a08r 2012 3' Seed DPA10 263bp            
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