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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 9300
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_10015_a01f 2012 5' Callus 150bp Contig9570       alpha-tubulin[Alopecurusaequalis] 86 3.25062e-15
whcs_1015_a01f 2012 5' Callus 110bp            
whcs_14015_a01f 2012 5' Callus 751bp Contig13506       calcium-dependentproteinkinase2[Triticumaestivum] 408 1.30964e-111
whcs_16015_a01f 2012 5' Callus 739bp            
whcs_19015_a01f 2012 5' Callus 724bp Contig16645       stressresponseprotein[Triticumaestivum] 350 2.98263e-94
whcs_2015_a01f 2012 5' Callus 401bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 83 3.55533e-14
whcs_3015_a01f 2012 5' Callus 677bp Contig28411       translationally-controlledtumorprotein[Triticumaestivum] 344 1.07759e-92
whcs_4015_a01f 2012 5' Callus 710bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 462 6.79593e-128
whcs_6015_a01f 2012 5' Callus 750bp Contig30775       cytosolicmalatedehydrogenase[Triticumaestivum] 464 1.17903e-128
whcs_9015_a01f 2012 5' Callus 343bp Contig8329       Os11g0139100[OryzasativaJaponicaGroup] 52 5.18862e-05
whcs_10015_a01r 2012 3' Callus 235bp Contig9570       putativetubulinalpha-3chain[Miscanthussinensis] 166 3.17543e-39
whcs_1015_a01r 2012 3' Callus 529bp Contig21331       elicitorresponsivegene3[Triticumaestivum] 254 9.91872e-66
whcs_14015_a01r 2012 3' Callus 799bp Contig13506       calcium-dependentproteinkinase2[Triticumaestivum] 345 1.16598e-92
whcs_16015_a01r 2012 3' Callus 727bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 229 5.9317e-58
whcs_18015_a01r 2012 3' Callus 418bp Contig20547       predictedprotein[Hordeumvulgaresubsp.vulgare] 179 3.67281e-43
whcs_19015_a01r 2012 3' Callus 737bp Contig16645       stressresponseprotein[Triticumaestivum] 350 3.09735e-94
whcs_2015_a01r 2012 3' Callus 369bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 98 7.99352e-19
whcs_3015_a01r 2012 3' Callus 728bp Contig28411       translationally-controlledtumorprotein[Triticumaestivum] 344 1.26517e-92
whcs_4015_a01r 2012 3' Callus 787bp Contig18913       predictedprotein[Hordeumvulgaresubsp.vulgare] 386 4.45605e-105
whcs_5015_a01r 2012 3' Callus 655bp Contig3301       PREDICTED:glycine-richRNA-bindingprotein2,mitochondrial-like[Brachypodiumdistachyon] 226 4.00793e-57
whcs_6015_a01r 2012 3' Callus 725bp Contig30775       cytosolicmalatedehydrogenase[Triticumaestivum] 386 3.75557e-105
whcs_9015_a01r 2012 3' Callus 311bp Contig8329       Os11g0139100[OryzasativaJaponicaGroup] 83 3.48339e-14
whcs_1015_a02f 2012 5' Callus 330bp Contig9283       S-adenosylmethioninedecarboxylase[Triticummonococcum] 227 1.15868e-57
whcs_15015_a02f 2012 5' Callus 732bp Contig30775       cytosolicmalatedehydrogenase[Triticumaestivum] 468 1.00033e-129
whcs_20015_a02f 2012 5' Callus 627bp Contig13859       PREDICTED:spermidinesynthase1-like[Brachypodiumdistachyon] 378 7.48302e-103
whcs_3015_a02f 2012 5' Callus 249bp Contig6712       PREDICTED:40SribosomalproteinS10-like[Brachypodiumdistachyon] 180 1.59939e-43
whcs_7015_a02f 2012 5' Callus 716bp Contig36557       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 484 1.28523e-134
whcs_8015_a02f 2012 5' Callus 666bp Contig17298       heatshockprotein90[Triticumaestivum] 282 4.88285e-74
whcs_9015_a02f 2012 5' Callus 334bp Contig8329       Os12g0135900[OryzasativaJaponicaGroup] 45 0.00619743
whcs_10015_a02r 2012 3' Callus 88bp       alpha-tubulin,partial[Moringaoleifera] 57 1.58123e-06
whcs_1015_a02r 2012 3' Callus 579bp Contig9283       S-adenosylmethioninedecarboxylase[Triticumaestivum] 292 3.32363e-77
whcs_15015_a02r 2012 3' Callus 701bp Contig30775       cytosolicmalatedehydrogenase[Triticumaestivum] 370 2.61034e-100
whcs_17015_a02r 2012 3' Callus 787bp Contig10295       predictedprotein[Hordeumvulgaresubsp.vulgare] 443 3.07163e-122
whcs_20015_a02r 2012 3' Callus 689bp Contig13859       PREDICTED:spermidinesynthase1-like[Brachypodiumdistachyon] 384 1.28237e-104
whcs_2015_a02r 2012 3' Callus 534bp Contig5916       predictedprotein[Hordeumvulgaresubsp.vulgare] 302 3.24655e-80
whcs_3015_a02r 2012 3' Callus 476bp Contig6712       PREDICTED:40SribosomalproteinS10-like[Brachypodiumdistachyon] 200 1.15606e-49
whcs_7015_a02r 2012 3' Callus 748bp Contig8296       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 415 8.05785e-114
whcs_8015_a02r 2012 3' Callus 618bp Contig17298       heatshockprotein90[Triticumaestivum] 297 1.21677e-78
whcs_9015_a02r 2012 3' Callus 329bp Contig8329       Os11g0139100[OryzasativaJaponicaGroup] 83 3.52938e-14
whcs_10016_a03f 2012 5' Callus 226bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 68 1.19293e-09
whcs_11016_a03f 2012 5' Callus 603bp Contig614       Chainv,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 218 8.72086e-55
whcs_13016_a03f 2012 5' Callus 672bp       PREDICTED:originrecognitioncomplexsubunit1-like[Brachypodiumdistachyon] 418 7.49664e-115
whcs_14016_a03f 2012 5' Callus 679bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 398 8.3049e-109
whcs_15016_a03f 2012 5' Callus 114bp            
whcs_16016_a03f 2012 5' Callus 744bp Contig30800       RecName:Full=Translationally-controlledtumorproteinhomolog;Short=TCTP 344 1.32541e-92
whcs_19016_a03f 2012 5' Callus 614bp Contig785       predictedprotein[Hordeumvulgaresubsp.vulgare] 259 3.62038e-67
whcs_20016_a03f 2012 5' Callus 742bp Contig17541       DNA-bindingprotein[Triticumaestivum] 490 1.9532e-136
whcs_2016_a03f 2012 5' Callus 596bp Contig5037       predictedprotein[Hordeumvulgaresubsp.vulgare] 264 1.3714e-68
whcs_4016_a03f 2012 5' Callus 678bp Contig28411       translationally-controlledtumorprotein[Triticumaestivum] 344 1.07759e-92
whcs_6016_a03f 2012 5' Callus 731bp Contig8328       PREDICTED:T-complexprotein1subunitzeta-like[Brachypodiumdistachyon] 441 1.00265e-121
whcs_7016_a03f 2012 5' Callus 147bp            
whcs_8016_a03f 2012 5' Callus 706bp       PREDICTED:T-complexprotein1subunitalpha-like[Brachypodiumdistachyon] 416 3.24165e-114
whcs_11016_a03r 2012 3' Callus 562bp Contig614       Chainv,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 218 7.20358e-55
whcs_14016_a03r 2012 3' Callus 745bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 324 1.85376e-86
whcs_16016_a03r 2012 3' Callus 672bp Contig30800       RecName:Full=Translationally-controlledtumorproteinhomolog;Short=TCTP 344 1.06548e-92
whcs_19016_a03r 2012 3' Callus 588bp Contig785       predictedprotein[Hordeumvulgaresubsp.vulgare] 267 2.05067e-69
whcs_20016_a03r 2012 3' Callus 769bp Contig14       DNA-bindingprotein[Triticumaestivum] 417 2.92979e-114
whcs_2016_a03r 2012 3' Callus 244bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 148 5.21057e-34
whcs_4016_a03r 2012 3' Callus 727bp Contig28411       translationally-controlledtumorprotein[Triticumaestivum] 344 1.26517e-92
whcs_6016_a03r 2012 3' Callus 763bp Contig8328       PREDICTED:T-complexprotein1subunitzeta-like[Brachypodiumdistachyon] 418 7.57931e-115
whcs_7016_a03r 2012 3' Callus 224bp       serine/threonineproteinkinase[Streptomycessp.S4] 39 0.593419
whcs_8016_a03r 2012 3' Callus 752bp Contig36847       PREDICTED:T-complexprotein1subunitalpha-like[Brachypodiumdistachyon] 348 9.42911e-94
whcs_10016_a04f 2012 5' Callus 611bp Contig5108       predictedprotein[Hordeumvulgaresubsp.vulgare] 282 3.93648e-74
whcs_11016_a04f 2012 5' Callus 714bp Contig11598       hypotheticalproteinMELLADRAFT_94739[Melampsoralarici-populina98AG31] 116 1.8182e-33
whcs_13016_a04f 2012 5' Callus 75bp Contig23388       translationelongationfactor2[Prunuspersica] 60 1.8143e-07
whcs_14016_a04f 2012 5' Callus 748bp       GCN2-typeproteinkinase[Triticumaestivum] 483 3.17503e-134
whcs_15016_a04f 2012 5' Callus 706bp Contig16288       predictedprotein[Hordeumvulgaresubsp.vulgare] 329 1.58992e-90
whcs_16016_a04f 2012 5' Callus 592bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 269 5.3965e-70
whcs_19016_a04f 2012 5' Callus 755bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 376 3.26185e-102
whcs_3016_a04f 2012 5' Callus 677bp Contig14032       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 454 1.26116e-125
whcs_5016_a04f 2012 5' Callus 709bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 325 9.92776e-87
whcs_6016_a04f 2012 5' Callus 379bp       RecName:Full=ProteinH2A.6;AltName:Full=wcH2A-3 182 3.29433e-44
whcs_7016_a04f 2012 5' Callus 419bp Contig3941       PREDICTED:40SribosomalproteinS10-like[Brachypodiumdistachyon] 91 1.31542e-16
whcs_8016_a04f 2012 5' Callus 686bp       PREDICTED:uncharacterizedproteinLOC100836910[Brachypodiumdistachyon] 64 2.22494e-08
whcs_10016_a04r 2012 3' Callus 586bp Contig5108       predictedprotein[Hordeumvulgaresubsp.vulgare] 299 4.71504e-79
whcs_11016_a04r 2012 3' Callus 668bp Contig11598       hypotheticalproteinMELLADRAFT_94739[Melampsoralarici-populina98AG31] 116 1.59934e-33
whcs_13016_a04r 2012 3' Callus 77bp Contig10628       predictedprotein[Hordeumvulgaresubsp.vulgare] 53 2.31024e-05
whcs_14016_a04r 2012 3' Callus 778bp Contig15       GCN2-typeproteinkinase[Triticumaestivum] 133 6.63464e-29
whcs_15016_a04r 2012 3' Callus 672bp Contig16288       predictedprotein[Hordeumvulgaresubsp.vulgare] 376 3.26692e-102
whcs_16016_a04r 2012 3' Callus 694bp Contig26742       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 1.00532e-96
whcs_17016_a04r 2012 3' Callus 371bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 146 3.44414e-33
whcs_19016_a04r 2012 3' Callus 734bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 376 3.06156e-102
whcs_3016_a04r 2012 3' Callus 721bp Contig14032       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 412 4.79946e-113
whcs_5016_a04r 2012 3' Callus 711bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 284 1.93263e-74
whcs_7016_a04r 2012 3' Callus 396bp Contig3941       PREDICTED:40SribosomalproteinS10-like[Brachypodiumdistachyon] 103 2.56278e-20
whcs_8016_a04r 2012 3' Callus 698bp       PREDICTED:uncharacterizedproteinLOC100836910[Brachypodiumdistachyon] 89 1.14957e-15
whcs_11031_a05f 2012 5' Callus 658bp Contig31853       PREDICTED:60SribosomalproteinL27a-3-like[Brachypodiumdistachyon] 293 3.52878e-77
whcs_12031_a05f 2012 5' Callus 616bp       auxinresponsefactor8[Zeamays] 150 2.36854e-34
whcs_13031_a05f 2012 5' Callus 702bp Contig24779       glyceraldehyde-3-phosphatedehydrogenase[Triticumaestivum] 455 6.23358e-126
whcs_14031_a05f 2012 5' Callus 632bp Contig77       hypotheticalproteinTRIVIDRAFT_34158[TrichodermavirensGv29-8] 43 0.0434811
whcs_15031_a05f 2012 5' Callus 682bp Contig8873       predictedprotein[Hordeumvulgaresubsp.vulgare] 411 1.23813e-112
whcs_16031_a05f 2012 5' Callus 710bp Contig2156       translationinitiationfactoreIF1[syntheticconstruct] 233 5.13434e-59
whcs_17031_a05f 2012 5' Callus 750bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 450 2.97864e-124
whcs_2031_a05f 2012 5' Callus 329bp       Pyrrolo-quinolinequinone[RhodopseudomonaspalustrisHaA2] 39 0.342642
whcs_3031_a05f 2012 5' Callus 318bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 94 1.18542e-17
whcs_4031_a05f 2012 5' Callus 738bp       OO_Ba0005L10-OO_Ba0081K17.16[Oryzaofficinalis] 148 1.78757e-33
whcs_5031_a05f 2012 5' Callus 527bp Contig8390       PREDICTED:60SribosomalproteinL36a-likeisoform1[Brachypodiumdistachyon] 224 8.22917e-57
whcs_8031_a05f 2012 5' Callus 716bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 184 2.74912e-44
whcs_9031_a05f 2012 5' Callus 732bp Contig929       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 428 1.14718e-117
whcs_11031_a05r 2012 3' Callus 630bp Contig31853       PREDICTED:60SribosomalproteinL27a-3-like[Brachypodiumdistachyon] 293 3.16586e-77
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