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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 5080
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whrd_10015_a01r 2012 3' Root of dessiccated seed 617bp Contig6769       predictedprotein[Hordeumvulgaresubsp.vulgare] 344 1.13359e-92
whrd_1015_a01r 2012 3' Root of dessiccated seed 633bp Contig8043       predictedprotein[Hordeumvulgaresubsp.vulgare] 310 2.49067e-82
whrd_11015_a01r 2012 3' Root of dessiccated seed 379bp       hypotheticalproteinSrot_1129[SegniliparusrotundusDSM44985] 37 1.30536
whrd_14015_a01r 2012 3' Root of dessiccated seed 643bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 350 2.2587e-94
whrd_15015_a01r 2012 3' Root of dessiccated seed 131bp            
whrd_16015_a01r 2012 3' Root of dessiccated seed 635bp Contig7395       coldacclimationproteinWCOR410c[Triticumaestivum] 285 6.6572e-75
whrd_17015_a01r 2012 3' Root of dessiccated seed 72bp       beta-glucosidase[Hordeumvulgaresubsp.vulgare] 58 6.60707e-07
whrd_18015_a01r 2012 3' Root of dessiccated seed 370bp Contig19187       predictedprotein[Hordeumvulgaresubsp.vulgare] 170 1.65519e-40
whrd_19015_a01r 2012 3' Root of dessiccated seed 595bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 292 6.0472e-77
whrd_20015_a01r 2012 3' Root of dessiccated seed 433bp       pathogenesis-relatedprotein[Triticumaestivum] 146 1.97791e-33
whrd_2015_a01r 2012 3' Root of dessiccated seed 109bp       hypotheticalproteinSORBIDRAFT_02g003090[Sorghumbicolor] 73 2.17817e-11
whrd_3015_a01r 2012 3' Root of dessiccated seed 624bp Contig13951       PREDICTED:6-phosphogluconatedehydrogenase,decarboxylating-likeisoform1[Brachypodiumdistachyon] 299 4.35869e-79
whrd_4015_a01r 2012 3' Root of dessiccated seed 532bp Contig30497       wali3[Triticumaestivum] 183 1.64634e-44
whrd_5015_a01r 2012 3' Root of dessiccated seed 598bp Contig975       predictedprotein[Hordeumvulgaresubsp.vulgare] 336 2.1743e-90
whrd_6015_a01r 2012 3' Root of dessiccated seed 628bp       PREDICTED:riboflavinbiosynthesisproteinribBA,chloroplastic-like[Brachypodiumdistachyon] 261 1.31541e-67
whrd_7015_a01r 2012 3' Root of dessiccated seed 555bp Contig27580       PREDICTED:probableLRRreceptor-likeserine/threonine-proteinkinaseAt1g06840-like[Brachypodiumdistachyon] 210 2.4672e-52
whrd_10015_a02r 2012 3' Root of dessiccated seed 550bp Contig5683       gamma-typetonoplastintrinsicprotein[Triticumaestivum] 242 3.36866e-62
whrd_11015_a02r 2012 3' Root of dessiccated seed 275bp            
whrd_12015_a02r 2012 3' Root of dessiccated seed 393bp Contig32671       coronatineinsensitive1-likeprotein[Triticumaestivum] 122 5.17903e-26
whrd_13015_a02r 2012 3' Root of dessiccated seed 252bp Contig1060       ES1A[Hordeumvulgare] 44 0.0178896
whrd_15015_a02r 2012 3' Root of dessiccated seed 696bp       phosphoinositide-specificphospholipaseC2[Triticumaestivum] 372 6.79851e-101
whrd_16015_a02r 2012 3' Root of dessiccated seed 585bp Contig4743       predictedprotein[Hordeumvulgaresubsp.vulgare] 192 4.837e-47
whrd_17015_a02r 2012 3' Root of dessiccated seed 589bp       LEA2protein[Triticumaestivum] 309 1.91151e-98
whrd_19015_a02r 2012 3' Root of dessiccated seed 535bp Contig13390       predictedprotein[Hordeumvulgaresubsp.vulgare] 137 1.84568e-30
whrd_20015_a02r 2012 3' Root of dessiccated seed 628bp       Os04g0527400[OryzasativaJaponicaGroup] 271 9.86421e-71
whrd_4015_a02r 2012 3' Root of dessiccated seed 643bp Contig14586       bluecopperprotein[Triticumaestivum] 315 8.1554e-84
whrd_6015_a02r 2012 3' Root of dessiccated seed 647bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 307 1.31851e-81
whrd_7015_a02r 2012 3' Root of dessiccated seed 590bp Contig11830       predictedprotein[Hordeumvulgaresubsp.vulgare] 137 1.87639e-30
whrd_8015_a02r 2012 3' Root of dessiccated seed 582bp Contig24365       germin-likeprotein4[Triticummonococcum] 325 4.70411e-87
whrd_9015_a02r 2012 3' Root of dessiccated seed 604bp Contig23696       PREDICTED:abhydrolasedomain-containingprotein4-like[Brachypodiumdistachyon] 283 2.20744e-74
whrd_1016_a03r 2012 3' Root of dessiccated seed 618bp Contig11550       hypotheticalprotein[Aegilopstauschii] 266 3.00397e-69
whrd_11016_a03r 2012 3' Root of dessiccated seed 582bp Contig7395       dehydrin[Triticumdurum] 232 4.89276e-69
whrd_13016_a03r 2012 3' Root of dessiccated seed 615bp Contig23388       predictedprotein[Hordeumvulgaresubsp.vulgare] 312 4.70649e-83
whrd_14016_a03r 2012 3' Root of dessiccated seed 567bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 226 3.56571e-57
whrd_16016_a03r 2012 3' Root of dessiccated seed 606bp Contig12805       predictedprotein[Hordeumvulgaresubsp.vulgare] 182 7.13588e-44
whrd_17016_a03r 2012 3' Root of dessiccated seed 565bp Contig31936       bluecopper-bindingproteinhomolog[Triticumaestivum] 281 7.05717e-74
whrd_19016_a03r 2012 3' Root of dessiccated seed 578bp Contig30775       cytosolicmalatedehydrogenase[Triticumaestivum] 277 1.42095e-72
whrd_20016_a03r 2012 3' Root of dessiccated seed 669bp Contig19070       PREDICTED:dnaJproteinhomolog2-like[Brachypodiumdistachyon] 307 1.87271e-81
whrd_2016_a03r 2012 3' Root of dessiccated seed 650bp Contig10561       smallGTP-bindingprotein[Triticumaestivum] 325 6.18691e-87
whrd_3016_a03r 2012 3' Root of dessiccated seed 654bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 273 2.82454e-71
whrd_5016_a03r 2012 3' Root of dessiccated seed 404bp Contig670       PREDICTED:ATPsynthasesubunitO,mitochondrial-like[Brachypodiumdistachyon] 128 9.59793e-28
whrd_6016_a03r 2012 3' Root of dessiccated seed 616bp Contig9667       glutathioneS-transferase1[Triticummonococcum] 317 1.93811e-84
whrd_7016_a03r 2012 3' Root of dessiccated seed 626bp Contig4572       PREDICTED:26SproteaseregulatorysubunitS10BhomologB-like[Brachypodiumdistachyon] 308 7.1845e-82
whrd_8016_a03r 2012 3' Root of dessiccated seed 157bp            
whrd_9016_a03r 2012 3' Root of dessiccated seed 463bp       PREDICTED:uncharacterizedproteinLOC100829450[Brachypodiumdistachyon] 101 9.46096e-20
whrd_1016_a04r 2012 3' Root of dessiccated seed 673bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 80 3.74793e-13
whrd_11016_a04r 2012 3' Root of dessiccated seed 529bp Contig7395       dehydrin[Triticumdurum] 198 6.59027e-59
whrd_12016_a04r 2012 3' Root of dessiccated seed 313bp Contig18333       predictedprotein[Hordeumvulgaresubsp.vulgare] 169 2.81939e-40
whrd_14016_a04r 2012 3' Root of dessiccated seed 245bp Contig29147       P-typeATPase[Hordeumvulgare] 143 2.84934e-32
whrd_15016_a04r 2012 3' Root of dessiccated seed 621bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 103 4.46046e-20
whrd_16016_a04r 2012 3' Root of dessiccated seed 612bp Contig34655       predictedprotein[Hordeumvulgaresubsp.vulgare] 272 6.94854e-71
whrd_18016_a04r 2012 3' Root of dessiccated seed 667bp       PREDICTED:uncharacterizedproteinLOC100841807[Brachypodiumdistachyon] 195 7.9413e-48
whrd_19016_a04r 2012 3' Root of dessiccated seed 417bp Contig8522       predictedprotein[Hordeumvulgaresubsp.vulgare] 172 4.36499e-41
whrd_20016_a04r 2012 3' Root of dessiccated seed 554bp       PREDICTED:uncharacterizedproteinLOC100834200[Brachypodiumdistachyon] 262 5.47091e-68
whrd_2016_a04r 2012 3' Root of dessiccated seed 520bp Contig21494       predictedprotein[Hordeumvulgaresubsp.vulgare] 176 3.20396e-42
whrd_3016_a04r 2012 3' Root of dessiccated seed 312bp Contig33195       PREDICTED:uncharacterizedproteinLOC100829682[Brachypodiumdistachyon] 46 0.00471887
whrd_4016_a04r 2012 3' Root of dessiccated seed 635bp Contig37017       predictedprotein[Hordeumvulgaresubsp.vulgare] 311 1.13292e-82
whrd_5016_a04r 2012 3' Root of dessiccated seed 582bp Contig6310       predictedprotein[Hordeumvulgaresubsp.vulgare] 237 1.65717e-60
whrd_6016_a04r 2012 3' Root of dessiccated seed 47bp Contig9088            
whrd_7016_a04r 2012 3' Root of dessiccated seed 663bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 110 4.28709e-22
whrd_8016_a04r 2012 3' Root of dessiccated seed 653bp Contig22982       predictedprotein[Hordeumvulgaresubsp.vulgare] 258 9.40277e-67
whrd_9016_a04r 2012 3' Root of dessiccated seed 654bp Contig10851       predictedprotein[Hordeumvulgaresubsp.vulgare] 303 2.54877e-80
whrd_12031_a05r 2012 3' Root of dessiccated seed 605bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 284 1.00589e-74
whrd_13031_a05r 2012 3' Root of dessiccated seed 572bp Contig6987       dehydrin[Triticumdurum] 228 8.62642e-68
whrd_15031_a05r 2012 3' Root of dessiccated seed 662bp       PREDICTED:arginyl-tRNAsynthetase,cytoplasmic-like[Brachypodiumdistachyon] 293 3.57079e-77
whrd_16031_a05r 2012 3' Root of dessiccated seed 559bp Contig4745       NACtranscriptionfactor[Hordeumvulgaresubsp.vulgare] 193 1.90008e-47
whrd_17031_a05r 2012 3' Root of dessiccated seed 606bp Contig2554       predictedprotein[Hordeumvulgaresubsp.vulgare] 229 6.5503e-58
whrd_19031_a05r 2012 3' Root of dessiccated seed 641bp Contig18084       PREDICTED:fructose-1,6-bisphosphatase,cytosolic-like[Brachypodiumdistachyon] 333 2.18773e-89
whrd_20031_a05r 2012 3' Root of dessiccated seed 573bp Contig5382       glutamatedecarboxylase,putative,expressed[Triticumaestivum] 290 2.0466e-76
whrd_2031_a05r 2012 3' Root of dessiccated seed 171bp Contig32528       PREDICTED:uncharacterizedproteinLOC100834464[Brachypodiumdistachyon] 94 1.16761e-17
whrd_3031_a05r 2012 3' Root of dessiccated seed 594bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 263 2.30327e-68
whrd_4031_a05r 2012 3' Root of dessiccated seed 642bp Contig4162       predictedprotein[Hordeumvulgaresubsp.vulgare] 269 6.61771e-70
whrd_6031_a05r 2012 3' Root of dessiccated seed 475bp Contig20719       predictedprotein[Hordeumvulgaresubsp.vulgare] 150 1.37196e-34
whrd_7031_a05r 2012 3' Root of dessiccated seed 624bp Contig9861       60SribosomalproteinL5[Triticumaestivum] 307 1.20893e-81
whrd_8031_a05r 2012 3' Root of dessiccated seed 148bp            
whrd_9031_a05r 2012 3' Root of dessiccated seed 649bp Contig4746       predictedprotein[Hordeumvulgaresubsp.vulgare] 140 3.64096e-31
whrd_10031_a06r 2012 3' Root of dessiccated seed 465bp Contig5244       predictedprotein[Hordeumvulgaresubsp.vulgare] 230 1.06192e-58
whrd_13031_a06r 2012 3' Root of dessiccated seed 572bp Contig7395       dehydrin[Triticumdurum] 235 7.24699e-70
whrd_15031_a06r 2012 3' Root of dessiccated seed 508bp Contig29598       predictedprotein[Hordeumvulgaresubsp.vulgare] 223 2.20748e-56
whrd_16031_a06r 2012 3' Root of dessiccated seed 589bp Contig9597       PREDICTED:UDP-glucose6-dehydrogenase-like[Brachypodiumdistachyon] 242 4.14155e-62
whrd_18031_a06r 2012 3' Root of dessiccated seed 167bp Contig4289            
whrd_19031_a06r 2012 3' Root of dessiccated seed 593bp Contig36552       PREDICTED:uncharacterizedproteinLOC100822237[Brachypodiumdistachyon] 210 2.31398e-52
whrd_20031_a06r 2012 3' Root of dessiccated seed 542bp Contig1280       UDP-D-glucoseepimerase1[Hordeumvulgare] 190 2.50147e-46
whrd_2031_a06r 2012 3' Root of dessiccated seed 620bp       hypotheticalproteinOsJ_22165[OryzasativaJaponicaGroup] 95 1.2147e-17
whrd_3031_a06r 2012 3' Root of dessiccated seed 453bp Contig14447       unknown[Zeamays] 55 7.87837e-06
whrd_4031_a06r 2012 3' Root of dessiccated seed 103bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 67 2.05095e-09
whrd_5031_a06r 2012 3' Root of dessiccated seed 688bp Contig1509       predictedprotein[Hordeumvulgaresubsp.vulgare] 336 4.0049e-90
whrd_7031_a06r 2012 3' Root of dessiccated seed 588bp Contig10227       RecName:Full=Mitochondrialoutermembraneporin;AltName:Full=Voltage-dependentanion-selectivechannelprotein;Short=VDAC 273 2.15618e-71
whrd_8031_a06r 2012 3' Root of dessiccated seed 43bp            
whrd_9031_a06r 2012 3' Root of dessiccated seed 374bp Contig31811       sucrosesynthase[Loliumperenne] 156 1.29979e-39
whrd_10032_a07r 2012 3' Root of dessiccated seed 628bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 115 1.60981e-37
whrd_11032_a07r 2012 3' Root of dessiccated seed 644bp Contig11894       predictedprotein[Hordeumvulgaresubsp.vulgare] 368 8.11765e-100
whrd_12032_a07r 2012 3' Root of dessiccated seed 562bp Contig10915       predictedprotein[Hordeumvulgaresubsp.vulgare] 230 2.39249e-58
whrd_13032_a07r 2012 3' Root of dessiccated seed 528bp Contig24803       predictedprotein[Hordeumvulgaresubsp.vulgare] 148 7.49494e-34
whrd_14032_a07r 2012 3' Root of dessiccated seed 615bp Contig13019       PREDICTED:uncharacterizedproteinLOC100840135[Brachypodiumdistachyon] 291 1.12282e-76
whrd_16032_a07r 2012 3' Root of dessiccated seed 569bp Contig6008       putativeelongationfactor1beta[Hordeumvulgaresubsp.vulgare] 277 1.03266e-72
whrd_18032_a07r 2012 3' Root of dessiccated seed 380bp       PREDICTED:polygalacturonasenon-catalyticsubunitAroGP3-like[Brachypodiumdistachyon] 108 6.02159e-22
whrd_19032_a07r 2012 3' Root of dessiccated seed 674bp Contig4748       predictedprotein[Hordeumvulgaresubsp.vulgare] 320 2.81041e-85
whrd_20032_a07r 2012 3' Root of dessiccated seed 626bp       RecName:Full=HMG1/2-likeprotein 214 1.41193e-53
whrd_2032_a07r 2012 3' Root of dessiccated seed 587bp Contig4726       predictedprotein[Hordeumvulgaresubsp.vulgare] 306 3.00172e-81
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