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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 11105
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whf_17001_a01f 2012 5' Spike at flowering date 377bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 239 2.27084e-61
whf_20001_a01f 2012 5' Spike at flowering date 252bp       PREDICTED:6-phosphofructokinase3-like[Brachypodiumdistachyon] 165 5.5079e-39
whf_21001_a01f 2012 5' Spike at flowering date 355bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 200 1.98143e-49
whf_26001_a01f 2012 5' Spike at flowering date 568bp       hypotheticalproteinSORBIDRAFT_01g019210[Sorghumbicolor] 172 4.67861e-41
whf_27001_a01f 2012 5' Spike at flowering date 60bp Contig13684       Cellwall-associatedhydrolase,partial[Medicagotruncatula] 51 9.17249e-05
whf_12001_a01f 2012 5' Spike at flowering date 258bp       vacuolarinvertase1[Triticummonococcum] 185 6.6941e-45
whf_19001_a01f 2012 5' Spike at flowering date 508bp       PREDICTED:borontransporter4-like[Brachypodiumdistachyon] 280 1.51457e-73
whf_2001_a01f 2012 5' Spike at flowering date 536bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 293 2.01243e-77
whf_23001_a01f 2012 5' Spike at flowering date 260bp       PREDICTED:uncharacterizedproteinLOC100836090[Brachypodiumdistachyon] 139 4.19778e-31
whf_24001_a01f 2012 5' Spike at flowering date 430bp Contig11974       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 301 8.23001e-80
whf_28001_a01f 2012 5' Spike at flowering date 472bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 74 1.64661e-11
whf_5002_a01f 2012 5' Spike at flowering date 308bp Contig23385       hypotheticalproteinOsI_20483[OryzasativaIndicaGroup] 198 7.45712e-49
whf_6002_a01f 2012 5' Spike at flowering date 322bp Contig5544       PREDICTED:CBSdomain-containingproteinCBSX3,mitochondrial-like[Brachypodiumdistachyon] 193 1.87508e-47
whf_7002_a01f 2012 5' Spike at flowering date 308bp Contig1050       mitochondrialaldehydedehydrogenaseALDH2[Hordeumvulgaresubsp.vulgare] 128 7.25639e-28
whf_8001_a01f 2012 5' Spike at flowering date 551bp Contig34313       metallothionein[Triticumaestivum] 210 2.41975e-52
whf_17001_a01r 2012 3' Spike at flowering date 291bp       hypotheticalproteinSORBIDRAFT_06g019110[Sorghumbicolor] 77 1.50133e-12
whf_24002_a01r 2012 3' Spike at flowering date 461bp Contig11974       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 207 9.3736e-52
whf_25001_a01r 2012 3' Spike at flowering date 204bp       PREDICTED:rRNA-processingproteinFCF1homolog[Brachypodiumdistachyon] 143 2.19334e-32
whf_28002_a01r 2012 3' Spike at flowering date 476bp Contig25176       predictedprotein[Hordeumvulgaresubsp.vulgare] 62 4.91372e-08
whf_12001_a01r 2012 3' Spike at flowering date 199bp Contig11082       vacuolarinvertase[Triticumaestivum] 36 3.80108
whf_2001_a01r 2012 3' Spike at flowering date 175bp Contig14166       39kDaantigen[Leishmaniadonovani] 36 3.74949
whf_21001_a01r 2012 3' Spike at flowering date 589bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 221 9.72364e-56
whf_23001_a01r 2012 3' Spike at flowering date 246bp            
whf_5001_a01r 2012 3' Spike at flowering date 490bp Contig23385       PREDICTED:proteintranslationfactorSUI1homologisoform1[Brachypodiumdistachyon] 220 1.85595e-55
whf_6001_a01r 2012 3' Spike at flowering date 192bp Contig5544            
whf_8001_a01r 2012 3' Spike at flowering date 428bp Contig34313       metallothionein[Triticumaestivum] 135 6.00603e-30
whf_20001_a01r 2012 3' Spike at flowering date 150bp       PREDICTED:6-phosphofructokinase3-like[Brachypodiumdistachyon] 98 1.07961e-18
whf_17017_a02f 2012 5' Spike at flowering date 551bp       PREDICTED:probableproteintransportSec1a-like[Brachypodiumdistachyon] 240 1.28009e-61
whf_20017_a02f 2012 5' Spike at flowering date 322bp       HRAS-likesuppressor[Homosapiens] 39 0.452554
whf_22017_a02f 2012 5' Spike at flowering date 350bp Contig20809       putativecarbonicanhydrase[Triticumturgidumsubsp.durumxSecalecereale] 222 1.12319e-57
whf_25017_a02f 2012 5' Spike at flowering date 494bp Contig35417       predictedprotein[Hordeumvulgaresubsp.vulgare] 261 7.23132e-68
whf_27017_a02f 2012 5' Spike at flowering date 459bp       RecName:Full=Circadianlocomoteroutputcyclesproteinkaput 42 0.0684173
whf_1018_a02f 2012 5' Spike at flowering date 523bp Contig18881       aleuroneribonuclease[Hordeumvulgaresubsp.vulgare] 365 2.91908e-99
whf_11018_a02f 2012 5' Spike at flowering date 37bp            
whf_12017_a02f 2012 5' Spike at flowering date 398bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 202 3.09129e-50
whf_13017_a02f 2012 5' Spike at flowering date 481bp Contig2173       predictedprotein[Hordeumvulgaresubsp.vulgare] 318 4.94604e-85
whf_3017_a02f 2012 5' Spike at flowering date 512bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 36 0.0113965
whf_4017_a02f 2012 5' Spike at flowering date 581bp Contig19741       RecName:Full=PlasmamembraneATPase;AltName:Full=Protonpump 311 9.03014e-83
whf_6018_a02f 2012 5' Spike at flowering date 306bp Contig4023       predictedprotein[Hordeumvulgaresubsp.vulgare] 211 8.51228e-53
whf_7018_a02f 2012 5' Spike at flowering date 97bp Contig4023       predictedprotein[Hordeumvulgaresubsp.vulgare] 72 4.72188e-11
whf_18018_a02f 2012 5' Spike at flowering date 415bp       putativetranscriptionfactorEIL1[OryzasativaJaponicaGroup] 34 0.066102
whf_17017_a02r 2012 3' Spike at flowering date 530bp Contig3358       PREDICTED:probableproteintransportSec1a-like[Brachypodiumdistachyon] 199 2.89932e-49
whf_18018_a02r 2012 3' Spike at flowering date 482bp Contig12848       predictedprotein[Hordeumvulgaresubsp.vulgare] 42 6.62569e-07
whf_25017_a02r 2012 3' Spike at flowering date 512bp Contig35417       predictedprotein[Hordeumvulgaresubsp.vulgare] 252 3.36613e-65
whf_1018_a02r 2012 3' Spike at flowering date 528bp Contig18881       aleuroneribonuclease[Hordeumvulgaresubsp.vulgare] 205 6.74752e-51
whf_12017_a02r 2012 3' Spike at flowering date 292bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 106 3.92753e-21
whf_14018_a02r 2012 3' Spike at flowering date 460bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 158 8.51748e-37
whf_19017_a02r 2012 3' Spike at flowering date 511bp Contig7453       metallothionein[Triticumaestivum] 177 1.0537e-42
whf_3017_a02r 2012 3' Spike at flowering date 520bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 36 0.0118913
whf_4017_a02r 2012 3' Spike at flowering date 488bp Contig10350       PREDICTED:plasmamembraneATPase-likeisoform2[Brachypodiumdistachyon] 99 3.67256e-19
whf_7017_a02r 2012 3' Spike at flowering date 132bp Contig4023            
whf_20017_a02r 2012 3' Spike at flowering date 494bp       Pituitarytumor-transforminggene1protein-interactingproteinprecursor[Esoxlucius] 39 6.57208e-06
whf_22018_a02r 2012 3' Spike at flowering date 313bp Contig7038       putativecarbonicanhydrase[Triticumturgidumsubsp.durumxSecalecereale] 55 7.74948e-06
whf_27017_a02r 2012 3' Spike at flowering date 464bp       RecName:Full=Circadianlocomoteroutputcyclesproteinkaput 41 0.15585
whf_20033_a03f 2012 5' Spike at flowering date 406bp Contig4127       proteinphosphatase2Astructuralsubunit[Triticumaestivum] 257 7.99853e-67
whf_22033_a03f 2012 5' Spike at flowering date 544bp Contig9097       cyclophilin3[Dasypyrumvillosum] 315 5.13142e-84
whf_26033_a03f 2012 5' Spike at flowering date 519bp Contig4657       triosephosphat-isomerase[Triticumaestivum] 297 7.33565e-79
whf_11034_a03f 2012 5' Spike at flowering date 58bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 39 0.262367
whf_13033_a03f 2012 5' Spike at flowering date 515bp Contig2358       predictedprotein[Hordeumvulgaresubsp.vulgare] 227 9.1008e-58
whf_16033_a03f 2012 5' Spike at flowering date 543bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 42 0.0493887
whf_19033_a03f 2012 5' Spike at flowering date 487bp Contig4127       proteinphosphatase2Astructuralsubunit[Triticumaestivum] 319 1.72894e-85
whf_23033_a03f 2012 5' Spike at flowering date 189bp            
whf_28033_a03f 2012 5' Spike at flowering date 479bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 288 5.48118e-76
whf_3033_a03f 2012 5' Spike at flowering date 583bp Contig22065       14-3-3protein[Triticumaestivum] 217 1.38144e-54
whf_4033_a03f 2012 5' Spike at flowering date 211bp       Alpha/betahydrolasefold[BurkholderiadolosaAUO158] 40 0.259779
whf_6034_a03f 2012 5' Spike at flowering date 483bp Contig12943       PREDICTED:2,3-bisphosphoglycerate-independentphosphoglyceratemutase-like[Brachypodiumdistachyon] 303 1.25501e-80
whf_18034_a03f 2012 5' Spike at flowering date 527bp Contig1424       alternativesplicingregulator[Triticumaestivum] 285 5.13057e-75
whf_18034_a03r 2012 3' Spike at flowering date 431bp Contig27130       alternativesplicingregulator[Triticumaestivum] 147 1.52088e-33
whf_28034_a03r 2012 3' Spike at flowering date 357bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 138 5.42103e-31
whf_11034_a03r 2012 3' Spike at flowering date 86bp       papain-likecysteineproteinase[Hordeumvulgaresubsp.vulgare] 61 8.40914e-08
whf_14034_a03r 2012 3' Spike at flowering date 272bp Contig9629       hypotheticalproteinSORBIDRAFT_02g033225[Sorghumbicolor] 35 8.41802
whf_23033_a03r 2012 3' Spike at flowering date 186bp            
whf_3033_a03r 2012 3' Spike at flowering date 387bp Contig22065       14-3-3protein[Triticumaestivum] 79 2.9596e-13
whf_4033_a03r 2012 3' Spike at flowering date 136bp       PREDICTED:uncharacterizedproteinLOC100504941[Musmusculus] 37 1.6831
whf_5033_a03r 2012 3' Spike at flowering date 124bp            
whf_6033_a03r 2012 3' Spike at flowering date 585bp Contig12943       PREDICTED:2,3-bisphosphoglycerate-independentphosphoglyceratemutase-like[Brachypodiumdistachyon] 385 6.53367e-105
whf_7033_a03r 2012 3' Spike at flowering date 506bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 231 6.20656e-59
whf_22034_a03r 2012 3' Spike at flowering date 352bp       cyclophilinA-1[Triticumaestivum] 107 1.34354e-21
whf_26033_a03r 2012 3' Spike at flowering date 452bp Contig4657       RecName:Full=Triosephosphateisomerase,cytosolic;Short=TIM;Short=Triose-phosphateisomerase 180 1.6238e-43
whf_20049_a04f 2012 5' Spike at flowering date 306bp       NADHdehydrogenasesubunit5[Spizellomycespunctatus] 37 1.69075
whf_22049_a04f 2012 5' Spike at flowering date 271bp Contig19606       Cellwall-associatedhydrolase,partial[Medicagotruncatula] 181 7.27264e-44
whf_26049_a04f 2012 5' Spike at flowering date 380bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 244 1.19932e-62
whf_27049_a04f 2012 5' Spike at flowering date 103bp Contig4217       PREDICTED:40SribosomalproteinS3-3-like[Brachypodiumdistachyon] 71 1.42033e-10
whf_10049_a04f 2012 5' Spike at flowering date 407bp Contig3215       predictedprotein[Hordeumvulgaresubsp.vulgare] 256 1.78189e-66
whf_12049_a04f 2012 5' Spike at flowering date 502bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 338 3.5149e-91
whf_13049_a04f 2012 5' Spike at flowering date 605bp Contig2292       PREDICTED:probableNADHdehydrogenase[ubiquinone]1alphasubcomplexsubunit5,mitochondrial-like[Brachypodiumdistachyon] 341 9.05579e-92
whf_15049_a04f 2012 5' Spike at flowering date 591bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 319 3.48172e-85
whf_19049_a04f 2012 5' Spike at flowering date 574bp       S276[Triticumaestivum] 122 5.75067e-26
whf_2049_a04f 2012 5' Spike at flowering date 580bp Contig32274       predictedprotein[Hordeumvulgaresubsp.vulgare] 289 3.61346e-76
whf_23049_a04f 2012 5' Spike at flowering date 541bp Contig13471       uncharacterizedproteinLOC100384428[Zeamays] 202 3.7293e-50
whf_6050_a04f 2012 5' Spike at flowering date 308bp Contig9222       Os09g0567300[OryzasativaJaponicaGroup] 187 1.00786e-45
whf_8049_a04f 2012 5' Spike at flowering date 321bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 4.75057e-51
whf_9050_a04f 2012 5' Spike at flowering date 526bp       PREDICTED:salutaridinereductase-like[Brachypodiumdistachyon] 302 2.32368e-80
whf_10049_a04r 2012 3' Spike at flowering date 398bp Contig3215       predictedprotein[Hordeumvulgaresubsp.vulgare] 240 1.02431e-61
whf_12049_a04r 2012 3' Spike at flowering date 495bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 87 1.86043e-15
whf_15049_a04r 2012 3' Spike at flowering date 643bp Contig20967       Os06g0149400[OryzasativaJaponicaGroup] 228 1.31112e-57
whf_19049_a04r 2012 3' Spike at flowering date 511bp       S276[Triticumaestivum] 120 1.52861e-25
whf_2049_a04r 2012 3' Spike at flowering date 437bp Contig32274       predictedprotein[Hordeumvulgaresubsp.vulgare] 145 4.38755e-33
whf_21049_a04r 2012 3' Spike at flowering date 207bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 70 2.35195e-10
whf_23049_a04r 2012 3' Spike at flowering date 525bp Contig13471       uncharacterizedproteinLOC100384428[Zeamays] 192 3.38666e-47
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