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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 4870
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_10015_a01r 2012 3' Callus 235bp Contig9570       putativetubulinalpha-3chain[Miscanthussinensis] 166 3.17543e-39
whcs_1015_a01r 2012 3' Callus 529bp Contig21331       elicitorresponsivegene3[Triticumaestivum] 254 9.91872e-66
whcs_14015_a01r 2012 3' Callus 799bp Contig13506       calcium-dependentproteinkinase2[Triticumaestivum] 345 1.16598e-92
whcs_16015_a01r 2012 3' Callus 727bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 229 5.9317e-58
whcs_18015_a01r 2012 3' Callus 418bp Contig20547       predictedprotein[Hordeumvulgaresubsp.vulgare] 179 3.67281e-43
whcs_19015_a01r 2012 3' Callus 737bp Contig16645       stressresponseprotein[Triticumaestivum] 350 3.09735e-94
whcs_2015_a01r 2012 3' Callus 369bp Contig24338       predictedprotein[Hordeumvulgaresubsp.vulgare] 98 7.99352e-19
whcs_3015_a01r 2012 3' Callus 728bp Contig28411       translationally-controlledtumorprotein[Triticumaestivum] 344 1.26517e-92
whcs_4015_a01r 2012 3' Callus 787bp Contig18913       predictedprotein[Hordeumvulgaresubsp.vulgare] 386 4.45605e-105
whcs_5015_a01r 2012 3' Callus 655bp Contig3301       PREDICTED:glycine-richRNA-bindingprotein2,mitochondrial-like[Brachypodiumdistachyon] 226 4.00793e-57
whcs_6015_a01r 2012 3' Callus 725bp Contig30775       cytosolicmalatedehydrogenase[Triticumaestivum] 386 3.75557e-105
whcs_9015_a01r 2012 3' Callus 311bp Contig8329       Os11g0139100[OryzasativaJaponicaGroup] 83 3.48339e-14
whcs_10015_a02r 2012 3' Callus 88bp       alpha-tubulin,partial[Moringaoleifera] 57 1.58123e-06
whcs_1015_a02r 2012 3' Callus 579bp Contig9283       S-adenosylmethioninedecarboxylase[Triticumaestivum] 292 3.32363e-77
whcs_15015_a02r 2012 3' Callus 701bp Contig30775       cytosolicmalatedehydrogenase[Triticumaestivum] 370 2.61034e-100
whcs_17015_a02r 2012 3' Callus 787bp Contig10295       predictedprotein[Hordeumvulgaresubsp.vulgare] 443 3.07163e-122
whcs_20015_a02r 2012 3' Callus 689bp Contig13859       PREDICTED:spermidinesynthase1-like[Brachypodiumdistachyon] 384 1.28237e-104
whcs_2015_a02r 2012 3' Callus 534bp Contig5916       predictedprotein[Hordeumvulgaresubsp.vulgare] 302 3.24655e-80
whcs_3015_a02r 2012 3' Callus 476bp Contig6712       PREDICTED:40SribosomalproteinS10-like[Brachypodiumdistachyon] 200 1.15606e-49
whcs_7015_a02r 2012 3' Callus 748bp Contig8296       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 415 8.05785e-114
whcs_8015_a02r 2012 3' Callus 618bp Contig17298       heatshockprotein90[Triticumaestivum] 297 1.21677e-78
whcs_9015_a02r 2012 3' Callus 329bp Contig8329       Os11g0139100[OryzasativaJaponicaGroup] 83 3.52938e-14
whcs_11016_a03r 2012 3' Callus 562bp Contig614       Chainv,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 218 7.20358e-55
whcs_14016_a03r 2012 3' Callus 745bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 324 1.85376e-86
whcs_16016_a03r 2012 3' Callus 672bp Contig30800       RecName:Full=Translationally-controlledtumorproteinhomolog;Short=TCTP 344 1.06548e-92
whcs_19016_a03r 2012 3' Callus 588bp Contig785       predictedprotein[Hordeumvulgaresubsp.vulgare] 267 2.05067e-69
whcs_20016_a03r 2012 3' Callus 769bp Contig14       DNA-bindingprotein[Triticumaestivum] 417 2.92979e-114
whcs_2016_a03r 2012 3' Callus 244bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 148 5.21057e-34
whcs_4016_a03r 2012 3' Callus 727bp Contig28411       translationally-controlledtumorprotein[Triticumaestivum] 344 1.26517e-92
whcs_6016_a03r 2012 3' Callus 763bp Contig8328       PREDICTED:T-complexprotein1subunitzeta-like[Brachypodiumdistachyon] 418 7.57931e-115
whcs_7016_a03r 2012 3' Callus 224bp       serine/threonineproteinkinase[Streptomycessp.S4] 39 0.593419
whcs_8016_a03r 2012 3' Callus 752bp Contig36847       PREDICTED:T-complexprotein1subunitalpha-like[Brachypodiumdistachyon] 348 9.42911e-94
whcs_10016_a04r 2012 3' Callus 586bp Contig5108       predictedprotein[Hordeumvulgaresubsp.vulgare] 299 4.71504e-79
whcs_11016_a04r 2012 3' Callus 668bp Contig11598       hypotheticalproteinMELLADRAFT_94739[Melampsoralarici-populina98AG31] 116 1.59934e-33
whcs_13016_a04r 2012 3' Callus 77bp Contig10628       predictedprotein[Hordeumvulgaresubsp.vulgare] 53 2.31024e-05
whcs_14016_a04r 2012 3' Callus 778bp Contig15       GCN2-typeproteinkinase[Triticumaestivum] 133 6.63464e-29
whcs_15016_a04r 2012 3' Callus 672bp Contig16288       predictedprotein[Hordeumvulgaresubsp.vulgare] 376 3.26692e-102
whcs_16016_a04r 2012 3' Callus 694bp Contig26742       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 1.00532e-96
whcs_17016_a04r 2012 3' Callus 371bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 146 3.44414e-33
whcs_19016_a04r 2012 3' Callus 734bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 376 3.06156e-102
whcs_3016_a04r 2012 3' Callus 721bp Contig14032       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 412 4.79946e-113
whcs_5016_a04r 2012 3' Callus 711bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 284 1.93263e-74
whcs_7016_a04r 2012 3' Callus 396bp Contig3941       PREDICTED:40SribosomalproteinS10-like[Brachypodiumdistachyon] 103 2.56278e-20
whcs_8016_a04r 2012 3' Callus 698bp       PREDICTED:uncharacterizedproteinLOC100836910[Brachypodiumdistachyon] 89 1.14957e-15
whcs_11031_a05r 2012 3' Callus 630bp Contig31853       PREDICTED:60SribosomalproteinL27a-3-like[Brachypodiumdistachyon] 293 3.16586e-77
whcs_12031_a05r 2012 3' Callus 649bp       auxinresponsefactor8[Zeamays] 164 2.38397e-38
whcs_14031_a05r 2012 3' Callus 793bp Contig77       hypotheticalproteinTRIVIDRAFT_34158[TrichodermavirensGv29-8] 48 0.00222024
whcs_15031_a05r 2012 3' Callus 743bp Contig8873       predictedprotein[Hordeumvulgaresubsp.vulgare] 406 2.84011e-111
whcs_16031_a05r 2012 3' Callus 665bp Contig2156       translationinitiationfactoreIF1[syntheticconstruct] 233 4.43688e-59
whcs_17031_a05r 2012 3' Callus 743bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 397 2.25035e-108
whcs_2031_a05r 2012 3' Callus 578bp       predictedprotein[Micromonassp.RCC299] 40 0.29235
whcs_3031_a05r 2012 3' Callus 696bp Contig4453       predictedprotein[Hordeumvulgaresubsp.vulgare] 327 1.90036e-87
whcs_4031_a05r 2012 3' Callus 764bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 142 4.71578e-39
whcs_5031_a05r 2012 3' Callus 483bp Contig8390       PREDICTED:60SribosomalproteinL36a-likeisoform1[Brachypodiumdistachyon] 224 7.40893e-57
whcs_8031_a05r 2012 3' Callus 728bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 353 2.72361e-95
whcs_9031_a05r 2012 3' Callus 751bp Contig18331       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 379 4.98816e-103
whcs_10031_a06r 2012 3' Callus 738bp Contig30775       cytosolicmalatedehydrogenase[Triticumaestivum] 372 5.88177e-101
whcs_11031_a06r 2012 3' Callus 755bp Contig9751       PREDICTED:ABCtransporterFfamilymember1-like[Brachypodiumdistachyon] 436 3.46886e-120
whcs_12031_a06r 2012 3' Callus 218bp            
whcs_13031_a06r 2012 3' Callus 275bp       PREDICTED:LOWQUALITYPROTEIN:rhoguaninenucleotideexchangefactor15-like[Pongoabelii] 40 0.199655
whcs_14031_a06r 2012 3' Callus 755bp Contig10192       ribosomalproteinL3[Triticumaestivum] 453 2.09961e-125
whcs_15031_a06r 2012 3' Callus 714bp Contig8873       predictedprotein[Hordeumvulgaresubsp.vulgare] 366 2.99056e-99
whcs_19031_a06r 2012 3' Callus 693bp Contig18630       PREDICTED:60SribosomalproteinL9-likeisoform1[Brachypodiumdistachyon] 273 3.25659e-71
whcs_20031_a06r 2012 3' Callus 620bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 57 2.14912e-06
whcs_2031_a06r 2012 3' Callus 119bp Contig3305            
whcs_4031_a06r 2012 3' Callus 769bp Contig35001       hypotheticalproteinOsJ_34853[OryzasativaJaponicaGroup] 434 1.77333e-119
whcs_6031_a06r 2012 3' Callus 662bp Contig8643       PREDICTED:cytochromeb-c1complexsubunit7-like[Brachypodiumdistachyon] 229 4.84851e-58
whcs_7031_a06r 2012 3' Callus 782bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 304 2.86158e-80
whcs_8031_a06r 2012 3' Callus 534bp Contig23967       RecName:Full=Translationally-controlledtumorproteinhomolog;Short=TCTP 329 3.23903e-88
whcs_9031_a06r 2012 3' Callus 662bp Contig8091       translationinitiationfactor[Triticumaestivum] 232 7.48017e-59
whcs_1032_a07r 2012 3' Callus 595bp Contig2610       14-3-3protein[Triticumaestivum] 117 2.07319e-24
whcs_11032_a07r 2012 3' Callus 736bp Contig19786       stressresponseprotein[Triticumaestivum] 243 5.33251e-62
whcs_13032_a07r 2012 3' Callus 682bp Contig16804       PREDICTED:topless-relatedprotein1-like[Brachypodiumdistachyon] 227 1.96299e-57
whcs_15032_a07r 2012 3' Callus 702bp       ubiquitinfusiondegradation1protein[Triticumaestivum] 373 2.36096e-101
whcs_16032_a07r 2012 3' Callus 667bp Contig825       predictedprotein[Hordeumvulgaresubsp.vulgare] 283 3.78214e-74
whcs_17032_a07r 2012 3' Callus 732bp Contig4566       predictedprotein[Hordeumvulgaresubsp.vulgare] 437 1.89092e-120
whcs_18032_a07r 2012 3' Callus 722bp Contig17298       heatshockprotein90[Triticumaestivum] 357 2.41648e-96
whcs_20032_a07r 2012 3' Callus 692bp Contig8854       PREDICTED:eukaryoticinitiationfactor4A-1-like[Brachypodiumdistachyon] 258 1.40098e-66
whcs_2032_a07r 2012 3' Callus 683bp Contig26888       glyceraldehyde-3-phosphatedehydrogenase[Triticumaestivum] 346 4.94578e-93
whcs_3032_a07r 2012 3' Callus 732bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 166 8.13091e-39
whcs_4032_a07r 2012 3' Callus 378bp Contig9601       predictedprotein[Hordeumvulgaresubsp.vulgare] 123 3.08543e-26
whcs_5032_a07r 2012 3' Callus 758bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 485 8.57915e-135
whcs_6032_a07r 2012 3' Callus 731bp Contig9481       predictedprotein[Hordeumvulgaresubsp.vulgare] 311 1.56492e-82
whcs_8032_a07r 2012 3' Callus 537bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 214 1.21332e-53
whcs_9032_a07r 2012 3' Callus 690bp Contig7755       predictedprotein[Hordeumvulgaresubsp.vulgare] 327 2.42969e-87
whcs_1032_a08r 2012 3' Callus 57bp Contig22065       14-3-3protein[Triticumaestivum] 43 0.0224812
whcs_12032_a08r 2012 3' Callus 745bp Contig17743       PREDICTED:proteinFRIGIDA-like[Brachypodiumdistachyon] 382 5.78805e-104
whcs_13032_a08r 2012 3' Callus 311bp Contig5815       putativeproteinaseinhibitor-relatedprotein[Triticumaestivum] 104 1.46012e-20
whcs_14032_a08r 2012 3' Callus 663bp Contig16       predictedprotein[Hordeumvulgaresubsp.vulgare] 372 4.63126e-101
whcs_15032_a08r 2012 3' Callus 562bp       ubiquitinfusiondegradation1protein[Triticumaestivum] 334 9.1743e-90
whcs_16032_a08r 2012 3' Callus 39bp            
whcs_17032_a08r 2012 3' Callus 126bp Contig5067            
whcs_18032_a08r 2012 3' Callus 255bp       hypotheticalproteinCLOBOL_02296[ClostridiumbolteaeATCCBAA-613] 39 0.593272
whcs_20032_a08r 2012 3' Callus 713bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 323 4.90328e-86
whcs_2032_a08r 2012 3' Callus 663bp Contig23422       hypotheticalproteinAURANDRAFT_72910[Aureococcusanophagefferens] 59 6.64478e-07
whcs_5032_a08r 2012 3' Callus 671bp Contig6008       putativeelongationfactor1beta[Hordeumvulgaresubsp.vulgare] 277 1.58138e-72
whcs_6032_a08r 2012 3' Callus 688bp Contig33330       PREDICTED:ras-relatedproteinRABC1-like[Brachypodiumdistachyon] 349 5.97067e-94
whcs_1047_a09r 2012 3' Callus 609bp Contig18       predictedprotein[Hordeumvulgaresubsp.vulgare] 121 1.16139e-25
whcs_11047_a09r 2012 3' Callus 457bp Contig2026       PREDICTED:glycosylphosphatidylinositolanchorattachment1protein-like[Brachypodiumdistachyon] 239 3.81355e-61
whcs_13047_a09r 2012 3' Callus 680bp Contig10597       PREDICTED:inactiverhomboidprotein1-like[Brachypodiumdistachyon] 296 5.80493e-78
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