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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 5042
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whms_11015_a01f 2012 5' Seed DPA5 of DT3DL CS wheat 35bp            
whms_12015_a01f 2012 5' Seed DPA5 of DT3DL CS wheat 402bp Contig8349       heatshockprotein90[Triticumaestivum] 130 1.48682e-28
whms_13015_a01f 2012 5' Seed DPA5 of DT3DL CS wheat 562bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.2515e-54
whms_15015_a01f 2012 5' Seed DPA5 of DT3DL CS wheat 614bp Contig4522       predictedprotein[Hordeumvulgaresubsp.vulgare] 396 2.47829e-108
whms_16015_a01f 2012 5' Seed DPA5 of DT3DL CS wheat 560bp Contig3157       PREDICTED:transcriptionfactorBTF3-likeisoform1[Brachypodiumdistachyon] 171 1.00985e-40
whms_17015_a01f 2012 5' Seed DPA5 of DT3DL CS wheat 602bp Contig15408       predictedprotein[Hordeumvulgaresubsp.vulgare] 344 1.05376e-92
whms_18015_a01f 2012 5' Seed DPA5 of DT3DL CS wheat 396bp Contig971       hypotheticalproteinPPL_10766[PolysphondyliumpallidumPN500] 36 3.84738
whms_20015_a01f 2012 5' Seed DPA5 of DT3DL CS wheat 657bp Contig13577       putativeS-adenosylhomocysteinhydrolase2[Hordeumvulgaresubsp.vulgare] 434 1.28085e-119
whms_5015_a01f 2012 5' Seed DPA5 of DT3DL CS wheat 302bp       hypotheticalproteinSsol98_08391[Sulfolobussolfataricus98/2] 113 3.17811e-23
whms_7015_a01f 2012 5' Seed DPA5 of DT3DL CS wheat 569bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 2.31659e-48
whms_9015_a01f 2012 5' Seed DPA5 of DT3DL CS wheat 184bp            
whms_10015_a02f 2012 5' Seed DPA5 of DT3DL CS wheat 615bp Contig3158       PREDICTED:basicleucinezipperandW2domain-containingprotein2-like[Brachypodiumdistachyon] 341 1.23568e-91
whms_1015_a02f 2012 5' Seed DPA5 of DT3DL CS wheat 555bp Contig17783       hypersensitiveinducedresponseprotein3[Triticumaestivum] 343 1.86729e-92
whms_15015_a02f 2012 5' Seed DPA5 of DT3DL CS wheat 645bp Contig27368       PREDICTED:signalrecognitionparticle9kDaprotein-like[Brachypodiumdistachyon] 205 6.9683e-51
whms_16015_a02f 2012 5' Seed DPA5 of DT3DL CS wheat 516bp Contig26977       predictedprotein[Hordeumvulgaresubsp.vulgare] 194 8.74611e-48
whms_18015_a02f 2012 5' Seed DPA5 of DT3DL CS wheat 490bp Contig8314       PREDICTED:uncharacterizedproteinLOC100834759[Brachypodiumdistachyon] 67 2.01069e-09
whms_19015_a02f 2012 5' Seed DPA5 of DT3DL CS wheat 364bp       glycinerichprotein[Hordeumvulgaresubsp.vulgare] 112 5.3704e-23
whms_20015_a02f 2012 5' Seed DPA5 of DT3DL CS wheat 584bp       hypotheticalprotein[OryzasativaJaponicaGroup] 45 0.0122716
whms_2015_a02f 2012 5' Seed DPA5 of DT3DL CS wheat 441bp Contig23385       PREDICTED:proteintranslationfactorSUI1homologisoform1[Brachypodiumdistachyon] 145 7.45203e-33
whms_4015_a02f 2012 5' Seed DPA5 of DT3DL CS wheat 478bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 77 1.92779e-12
whms_7015_a02f 2012 5' Seed DPA5 of DT3DL CS wheat 557bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 136 4.61475e-30
whms_8015_a02f 2012 5' Seed DPA5 of DT3DL CS wheat 515bp Contig3064       PREDICTED:putativemitochondrial2-oxoglutarate/malatecarrierprotein-like[Brachypodiumdistachyon] 311 6.25881e-83
whms_10016_a03f 2012 5' Seed DPA5 of DT3DL CS wheat 611bp Contig20206       metallothionein[Triticumaestivum] 177 1.78348e-42
whms_11016_a03f 2012 5' Seed DPA5 of DT3DL CS wheat 500bp Contig6313       PREDICTED:histoneH4-like[Glycinemax] 209 2.474e-52
whms_12016_a03f 2012 5' Seed DPA5 of DT3DL CS wheat 616bp Contig9084       RecName:Full=ADP,ATPcarrierprotein1,mitochondrial;AltName:Full=ADP/ATPtranslocase1;AltName:Full=Adeninenucleotidetranslocator1;Short=ANT1;Flags:Precursor 191 1.60396e-46
whms_13016_a03f 2012 5' Seed DPA5 of DT3DL CS wheat 618bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 243 3.60682e-62
whms_14016_a03f 2012 5' Seed DPA5 of DT3DL CS wheat 479bp Contig135       predictedprotein[Hordeumvulgaresubsp.vulgare] 210 1.45249e-52
whms_15016_a03f 2012 5' Seed DPA5 of DT3DL CS wheat 215bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 76 3.26013e-12
whms_18016_a03f 2012 5' Seed DPA5 of DT3DL CS wheat 737bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 405 1.05962e-110
whms_19016_a03f 2012 5' Seed DPA5 of DT3DL CS wheat 642bp       HistoneH3[Medicagotruncatula] 262 6.2734e-68
whms_20016_a03f 2012 5' Seed DPA5 of DT3DL CS wheat 627bp Contig2119       predictedprotein[Hordeumvulgaresubsp.vulgare] 345 5.37514e-93
whms_2016_a03f 2012 5' Seed DPA5 of DT3DL CS wheat 588bp Contig3398       defensinprecursor[Triticumdurum] 155 6.55257e-36
whms_4016_a03f 2012 5' Seed DPA5 of DT3DL CS wheat 502bp Contig2041       translationinitiationfactor5A[Secalesylvestre] 141 6.30594e-32
whms_5016_a03f 2012 5' Seed DPA5 of DT3DL CS wheat 646bp       PREDICTED:uncharacterizedproteinLOC100833245[Brachypodiumdistachyon] 108 1.17398e-21
whms_7016_a03f 2012 5' Seed DPA5 of DT3DL CS wheat 237bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 151 6.19724e-35
whms_8016_a03f 2012 5' Seed DPA5 of DT3DL CS wheat 454bp Contig8383       PREDICTED:uncharacterizedproteinLOC100830294[Brachypodiumdistachyon] 100 2.12626e-19
whms_9016_a03f 2012 5' Seed DPA5 of DT3DL CS wheat 570bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 93 4.71127e-17
whms_10016_a04f 2012 5' Seed DPA5 of DT3DL CS wheat 152bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 101 9.73424e-20
whms_1016_a04f 2012 5' Seed DPA5 of DT3DL CS wheat 588bp Contig19994       heatshockprotein90[Triticumaestivum] 384 8.67313e-105
whms_11016_a04f 2012 5' Seed DPA5 of DT3DL CS wheat 549bp Contig6797       predictedprotein[Hordeumvulgaresubsp.vulgare] 362 3.73511e-98
whms_15016_a04f 2012 5' Seed DPA5 of DT3DL CS wheat 649bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 385 5.03779e-105
whms_16016_a04f 2012 5' Seed DPA5 of DT3DL CS wheat 572bp Contig6462       RecName:Full=Non-specificlipid-transferprotein4.3;Short=LTP4.3;Flags:Precursor 202 5.61233e-50
whms_17016_a04f 2012 5' Seed DPA5 of DT3DL CS wheat 33bp            
whms_18016_a04f 2012 5' Seed DPA5 of DT3DL CS wheat 712bp Contig1968       PREDICTED:40SribosomalproteinS24-2-like[Brachypodiumdistachyon] 262 6.02171e-68
whms_19016_a04f 2012 5' Seed DPA5 of DT3DL CS wheat 481bp Contig2295       PREDICTED:acylcarrierprotein2,mitochondrial-like[Brachypodiumdistachyon] 229 2.31356e-58
whms_20016_a04f 2012 5' Seed DPA5 of DT3DL CS wheat 667bp       hypotheticalprotein[OryzasativaJaponicaGroup] 45 0.0171361
whms_2016_a04f 2012 5' Seed DPA5 of DT3DL CS wheat 629bp Contig9107       methionineaminopeptiase[Hordeumvulgare] 364 1.4604e-98
whms_3016_a04f 2012 5' Seed DPA5 of DT3DL CS wheat 591bp Contig18222       Cellwall-associatedhydrolase[Medicagotruncatula] 158 1.02722e-36
whms_4016_a04f 2012 5' Seed DPA5 of DT3DL CS wheat 631bp Contig3160       TaWIN2[Triticumaestivum] 234 1.32989e-59
whms_6016_a04f 2012 5' Seed DPA5 of DT3DL CS wheat 633bp Contig2292       PREDICTED:probableNADHdehydrogenase[ubiquinone]1alphasubcomplexsubunit5,mitochondrial-like[Brachypodiumdistachyon] 341 1.33517e-91
whms_7016_a04f 2012 5' Seed DPA5 of DT3DL CS wheat 94bp Contig12203       unknown[Lotusjaponicus] 73 2.11956e-11
whms_8016_a04f 2012 5' Seed DPA5 of DT3DL CS wheat 638bp       MADS-boxprotein[Triticumaestivum] 424 1.21502e-116
whms_10031_a05f 2012 5' Seed DPA5 of DT3DL CS wheat 610bp Contig20206       metallothionein[Triticumaestivum] 177 1.75763e-42
whms_11031_a05f 2012 5' Seed DPA5 of DT3DL CS wheat 536bp Contig3161       predictedprotein[Hordeumvulgaresubsp.vulgare] 130 1.7275e-28
whms_14031_a05f 2012 5' Seed DPA5 of DT3DL CS wheat 598bp Contig2337       predictedprotein[Hordeumvulgaresubsp.vulgare] 266 3.59176e-69
whms_15031_a05f 2012 5' Seed DPA5 of DT3DL CS wheat 474bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.15904e-23
whms_17031_a05f 2012 5' Seed DPA5 of DT3DL CS wheat 612bp       Chain6,StructureOfSignalRecognitionParticleReceptor(Sr)InComplexWithSignalRecognitionParticle(Srp)AndRibosomeNascentChainComplex 68 1.16679e-09
whms_18031_a05f 2012 5' Seed DPA5 of DT3DL CS wheat 717bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 343 4.62448e-92
whms_20031_a05f 2012 5' Seed DPA5 of DT3DL CS wheat 671bp       phdfingerproteinBR140/LIN-49,related[NeosporacaninumLiverpool] 45 0.0172519
whms_2031_a05f 2012 5' Seed DPA5 of DT3DL CS wheat 506bp Contig22254       PREDICTED:histoneH4-like[Glycinemax] 210 1.93385e-52
whms_5031_a05f 2012 5' Seed DPA5 of DT3DL CS wheat 635bp Contig3162       PREDICTED:proteinEXECUTER1,chloroplastic-like[Brachypodiumdistachyon] 58 1.32356e-06
whms_6031_a05f 2012 5' Seed DPA5 of DT3DL CS wheat 137bp            
whms_7031_a05f 2012 5' Seed DPA5 of DT3DL CS wheat 460bp Contig5419       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 175 6.73317e-42
whms_8031_a05f 2012 5' Seed DPA5 of DT3DL CS wheat 559bp Contig9354       PREDICTED:DAZ-associatedprotein1-like[Brachypodiumdistachyon] 277 1.30673e-72
whms_10031_a06f 2012 5' Seed DPA5 of DT3DL CS wheat 600bp Contig20206       metallothionein[Triticumaestivum] 177 1.70593e-42
whms_11031_a06f 2012 5' Seed DPA5 of DT3DL CS wheat 572bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 201 9.57319e-50
whms_12031_a06f 2012 5' Seed DPA5 of DT3DL CS wheat 332bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 95 5.24195e-18
whms_13031_a06f 2012 5' Seed DPA5 of DT3DL CS wheat 581bp       PREDICTED:probableserine/threonine-proteinkinaseAt4g35230-likeisoform2[Brachypodiumdistachyon] 381 5.44041e-104
whms_14031_a06f 2012 5' Seed DPA5 of DT3DL CS wheat 639bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 257 1.50607e-66
whms_16031_a06f 2012 5' Seed DPA5 of DT3DL CS wheat 540bp       PREDICTED:ubiquitin-60SribosomalproteinL40-2-like[Brachypodiumdistachyon] 241 9.4616e-62
whms_19031_a06f 2012 5' Seed DPA5 of DT3DL CS wheat 695bp Contig1996       predictedprotein[Hordeumvulgaresubsp.vulgare] 34 0.0108018
whms_20031_a06f 2012 5' Seed DPA5 of DT3DL CS wheat 584bp Contig9501       predictedprotein[Hordeumvulgaresubsp.vulgare] 277 1.91872e-72
whms_2031_a06f 2012 5' Seed DPA5 of DT3DL CS wheat 87bp Contig28411       PREDICTED:translationally-controlledtumorproteinhomolog[Brachypodiumdistachyon] 64 9.93341e-09
whms_3031_a06f 2012 5' Seed DPA5 of DT3DL CS wheat 189bp Contig32008       PREDICTED:histoneH2B.2-likeisoform1[Brachypodiumdistachyon] 120 1.5476e-25
whms_4031_a06f 2012 5' Seed DPA5 of DT3DL CS wheat 617bp Contig6853       hypotheticalproteinOsI_19960[OryzasativaIndicaGroup] 393 2.77921e-107
whms_5031_a06f 2012 5' Seed DPA5 of DT3DL CS wheat 615bp Contig9221       cytosolicmalatedehydrogenase[Triticumaestivum] 389 3.95665e-106
whms_6031_a06f 2012 5' Seed DPA5 of DT3DL CS wheat 599bp       PREDICTED:uncharacterizedproteinLOC100828337[Brachypodiumdistachyon] 84 2.52809e-14
whms_7031_a06f 2012 5' Seed DPA5 of DT3DL CS wheat 625bp Contig18371       predictedprotein[Hordeumvulgaresubsp.vulgare] 393 1.67523e-107
whms_10032_a07f 2012 5' Seed DPA5 of DT3DL CS wheat 405bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 103 2.53164e-20
whms_11032_a07f 2012 5' Seed DPA5 of DT3DL CS wheat 595bp       PREDICTED:probablemethyltransferasePMT26-like[Brachypodiumdistachyon] 411 6.83912e-113
whms_14032_a07f 2012 5' Seed DPA5 of DT3DL CS wheat 630bp Contig6059       PREDICTED:methionineaminopeptidase2B-like[Brachypodiumdistachyon] 265 7.06917e-69
whms_15032_a07f 2012 5' Seed DPA5 of DT3DL CS wheat 602bp Contig10084       Os08g0326400[OryzasativaJaponicaGroup] 382 3.4917e-104
whms_18032_a07f 2012 5' Seed DPA5 of DT3DL CS wheat 320bp Contig3164       GJ12988[Drosophilavirilis] 36 5.00357
whms_19032_a07f 2012 5' Seed DPA5 of DT3DL CS wheat 762bp Contig22065       PREDICTED:14-3-3-likeproteinA-like[Brachypodiumdistachyon] 460 1.73923e-127
whms_2032_a07f 2012 5' Seed DPA5 of DT3DL CS wheat 618bp Contig3955       PREDICTED:smallnuclearribonucleoproteinE-like[Brachypodiumdistachyon] 175 1.20628e-41
whms_3032_a07f 2012 5' Seed DPA5 of DT3DL CS wheat 594bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 245 6.59234e-63
whms_4032_a07f 2012 5' Seed DPA5 of DT3DL CS wheat 80bp Contig5556       predictedprotein[Hordeumvulgaresubsp.vulgare] 55 7.91703e-06
whms_7032_a07f 2012 5' Seed DPA5 of DT3DL CS wheat 539bp Contig9150       PREDICTED:uncharacterizedproteinLOC100833880[Brachypodiumdistachyon] 139 3.79804e-31
whms_10032_a08f 2012 5' Seed DPA5 of DT3DL CS wheat 556bp Contig3305       Pyrrolo-quinolinequinone[RhodopseudomonaspalustrisHaA2] 40 0.338124
whms_1032_a08f 2012 5' Seed DPA5 of DT3DL CS wheat 579bp Contig13721       catalase[Triticumaestivum] 410 1.40457e-112
whms_15032_a08f 2012 5' Seed DPA5 of DT3DL CS wheat 539bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 343 1.32601e-92
whms_17032_a08f 2012 5' Seed DPA5 of DT3DL CS wheat 614bp Contig8492       PREDICTED:14-3-3-likeproteinA-like[Brachypodiumdistachyon] 333 3.36508e-89
whms_18032_a08f 2012 5' Seed DPA5 of DT3DL CS wheat 449bp Contig3064       PREDICTED:putativemitochondrial2-oxoglutarate/malatecarrierprotein-like[Brachypodiumdistachyon] 168 4.9104e-40
whms_19032_a08f 2012 5' Seed DPA5 of DT3DL CS wheat 736bp Contig35681       PREDICTED:uncharacterizedproteinLOC100845410[Brachypodiumdistachyon] 407 2.11528e-111
whms_20032_a08f 2012 5' Seed DPA5 of DT3DL CS wheat 625bp Contig8184       predictedprotein[Hordeumvulgaresubsp.vulgare] 289 5.89094e-76
whms_2032_a08f 2012 5' Seed DPA5 of DT3DL CS wheat 519bp Contig18339       cytosolicglutaminesynthetaseisoform[Triticumturgidumsubsp.durumxSecalecereale] 167 1.14493e-39
whms_3032_a08f 2012 5' Seed DPA5 of DT3DL CS wheat 623bp Contig6229       predictedprotein[Hordeumvulgaresubsp.vulgare] 65 4.45211e-09
whms_4032_a08f 2012 5' Seed DPA5 of DT3DL CS wheat 452bp Contig22224       predictedprotein[Hordeumvulgaresubsp.vulgare] 115 4.91186e-24
whms_5032_a08f 2012 5' Seed DPA5 of DT3DL CS wheat 618bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 251 1.32445e-64
whms_6032_a08f 2012 5' Seed DPA5 of DT3DL CS wheat 653bp Contig2292       PREDICTED:probableNADHdehydrogenase[ubiquinone]1alphasubcomplexsubunit5,mitochondrial-like[Brachypodiumdistachyon] 343 2.2225e-92
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