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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 11068
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
HX050075 whxn_12015_a01r 2012 3' Leaves, plant was grown at constant 23 548bp Contig27990       PREDICTED:multiprotein-bridgingfactor1a-like[Brachypodiumdistachyon] 263 1.808e-68
HX050076 whxn_13015_a01r 2012 3' Leaves, plant was grown at constant 23 80bp Contig24954       PREDICTED:multiprotein-bridgingfactor1a-like[Brachypodiumdistachyon] 53 2.3035e-05
HX050077 whxn_14015_a01r 2012 3' Leaves, plant was grown at constant 23 621bp       ribulose-1,5-bisphosphatecarboxylaseactivase[Triticumaestivum] 273 5.04044e-85
HX050078 whxn_15015_a01r 2012 3' Leaves, plant was grown at constant 23 136bp Contig9980            
HX050079 whxn_16015_a01r 2012 3' Leaves, plant was grown at constant 23 654bp       Ca2+bindingproteincbp1[Triticumaestivum] 223 4.3779e-56
HX050080 whxn_17015_a01r 2012 3' Leaves, plant was grown at constant 23 287bp Contig22807       GGDEFdomain-containingprotein[BrachyspirahyodysenteriaeWA1] 35 8.57561
HX050081 whxn_20015_a01r 2012 3' Leaves, plant was grown at constant 23 275bp Contig1762       PREDICTED:uncharacterizedproteinLOC100840648[Brachypodiumdistachyon] 107 1.32992e-21
HX050082 whxn_22015_a01r 2012 3' Leaves, plant was grown at constant 23 490bp Contig13387       PREDICTED:uncharacterizedproteinLOC100821340[Brachypodiumdistachyon] 143 1.69808e-32
HX050083 whxn_23015_a01r 2012 3' Leaves, plant was grown at constant 23 64bp Contig22498            
HX050084 whxn_24015_a01r 2012 3' Leaves, plant was grown at constant 23 60bp Contig8349            
HX050085 whxn_25015_a01r 2012 3' Leaves, plant was grown at constant 23 555bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Cynosuruscristatus] 386 1.50101e-105
HX050086 whxn_26015_a01r 2012 3' Leaves, plant was grown at constant 23 343bp       hypotheticalproteinHMPREF9628_01682[EubacteriaceaebacteriumCM5] 37 2.25588
HX050087 whxn_27015_a01r 2012 3' Leaves, plant was grown at constant 23 544bp Contig13223       predictedprotein[Hordeumvulgaresubsp.vulgare] 259 3.3574e-67
HX050088 whxn_28015_a01r 2012 3' Leaves, plant was grown at constant 23 446bp       bacitracinresistanceproteinBacA[MagnetospirillumgryphiswaldenseMSR-1] 36 3.82009
HX050089 whxn_29015_a01r 2012 3' Leaves, plant was grown at constant 23 477bp Contig15952       predictedprotein[Hordeumvulgaresubsp.vulgare] 200 1.15606e-49
HX050090 whxn_30015_a01r 2012 3' Leaves, plant was grown at constant 23 438bp Contig11428       91Aprotein,partial[Triticumaestivum] 286 1.58575e-75
HX050091 whxn_3015_a01r 2012 3' Leaves, plant was grown at constant 23 743bp Contig36827       Cellwall-associatedhydrolase,partial[Medicagotruncatula] 166 6.46055e-39
HX050092 whxn_31015_a01r 2012 3' Leaves, plant was grown at constant 23 701bp Contig18460       PREDICTED:vacuolarproteinsorting-associatedprotein29-like[Brachypodiumdistachyon] 267 2.38296e-69
HX050093 whxn_33015_a01r 2012 3' Leaves, plant was grown at constant 23 234bp Contig2419       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 157 1.13325e-36
HX050094 whxn_34015_a01r 2012 3' Leaves, plant was grown at constant 23 564bp Contig11262       retrotransposonprotein,putative,unclassified[OryzasativaJaponicaGroup] 59 2.74679e-08
HX050095 whxn_35015_a01r 2012 3' Leaves, plant was grown at constant 23 43bp Contig11262            
HX050096 whxn_36015_a01r 2012 3' Leaves, plant was grown at constant 23 512bp Contig32970       RecName:Full=PhotosystemII10kDapolypeptide,chloroplastic;Flags:Precursor 244 1.19723e-62
HX050097 whxn_40015_a01r 2012 3' Leaves, plant was grown at constant 23 575bp Contig3748       PREDICTED:acyl-coenzymeAoxidase4,peroxisomal-like[Brachypodiumdistachyon] 300 1.54084e-79
HX050098 whxn_7015_a01r 2012 3' Leaves, plant was grown at constant 23 87bp            
HX050099 whxn_8015_a01r 2012 3' Leaves, plant was grown at constant 23 623bp Contig15965       coronatineinsensitive2-likeprotein[Triticumaestivum] 289 4.44958e-76
HX050130 whxn_10015_a02r 2012 3' Leaves, plant was grown at constant 23 597bp Contig32559       predictedprotein[Hordeumvulgaresubsp.vulgare] 292 6.14169e-77
HX050131 whxn_1015_a02r 2012 3' Leaves, plant was grown at constant 23 141bp Contig17539       ribulosebiphosphatecarboxylase,partial[Poaannua] 99 4.68122e-19
HX050132 whxn_11015_a02r 2012 3' Leaves, plant was grown at constant 23 587bp Contig5689       deltatonoplastintrinsicproteinTIP2;2[Triticumaestivum] 264 1.30811e-68
HX050133 whxn_12015_a02r 2012 3' Leaves, plant was grown at constant 23 419bp Contig26137       cysteineproteinaseinhibitor[Triticumaestivum] 225 3.42173e-57
HX050134 whxn_13015_a02r 2012 3' Leaves, plant was grown at constant 23 322bp Contig15967       hypotheticalproteinMGG_12750[Magnaportheoryzae70-15] 37 1.71331
HX050135 whxn_16015_a02r 2012 3' Leaves, plant was grown at constant 23 584bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 297 1.0504e-78
HX050136 whxn_17015_a02r 2012 3' Leaves, plant was grown at constant 23 630bp Contig11607       predictedprotein[Hordeumvulgaresubsp.vulgare] 310 1.90704e-82
HX050137 whxn_18015_a02r 2012 3' Leaves, plant was grown at constant 23 503bp Contig6519       PREDICTED:uncharacterizedproteinLOC100846020[Brachypodiumdistachyon] 211 8.46363e-53
HX050138 whxn_19015_a02r 2012 3' Leaves, plant was grown at constant 23 108bp            
HX050139 whxn_2015_a02r 2012 3' Leaves, plant was grown at constant 23 184bp            
HX050140 whxn_22015_a02r 2012 3' Leaves, plant was grown at constant 23 524bp Contig9064       glutamine-dependentasparaginesynthetase[Triticumaestivum] 342 2.64633e-92
HX050141 whxn_23015_a02r 2012 3' Leaves, plant was grown at constant 23 323bp       hypotheticalprotein[OryzasativaJaponicaGroup] 49 5.06545e-11
HX050142 whxn_24015_a02r 2012 3' Leaves, plant was grown at constant 23 133bp       hypotheticalproteinOsJ_31478[OryzasativaJaponicaGroup] 46 0.00476143
HX050143 whxn_25015_a02r 2012 3' Leaves, plant was grown at constant 23 502bp Contig12611       RecName:Full=Phytepsin;AltName:Full=Asparticproteinase;Contains:RecName:Full=Phytepsin32kDasubunit;Contains:RecName:Full=Phytepsin29kDasubunit;Contains:RecName:Full=Phytepsin16kDasubunit;Contains:RecName:Full=Phytepsin11kDasubunit;Flags:Precursor 231 6.0514e-59
HX050144 whxn_26015_a02r 2012 3' Leaves, plant was grown at constant 23 271bp Contig12611       RecName:Full=Phytepsin;AltName:Full=Asparticproteinase;Contains:RecName:Full=Phytepsin32kDasubunit;Contains:RecName:Full=Phytepsin29kDasubunit;Contains:RecName:Full=Phytepsin16kDasubunit;Contains:RecName:Full=Phytepsin11kDasubunit;Flags:Precursor 184 1.12201e-44
HX050145 whxn_28015_a02r 2012 3' Leaves, plant was grown at constant 23 535bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 183 2.93303e-44
HX050146 whxn_29015_a02r 2012 3' Leaves, plant was grown at constant 23 512bp       Proteinkinasedomaincontainingprotein,expressed[OryzasativaJaponicaGroup] 68 6.89354e-10
HX050147 whxn_30015_a02r 2012 3' Leaves, plant was grown at constant 23 410bp Contig11644       predictedprotein[Hordeumvulgaresubsp.vulgare] 115 6.38513e-24
HX050148 whxn_3015_a02r 2012 3' Leaves, plant was grown at constant 23 32bp            
HX050149 whxn_31015_a02r 2012 3' Leaves, plant was grown at constant 23 624bp Contig16619       predictedprotein[Hordeumvulgaresubsp.vulgare] 123 4.22304e-26
HX050150 whxn_33015_a02r 2012 3' Leaves, plant was grown at constant 23 690bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 334 1.17778e-89
HX050151 whxn_34015_a02r 2012 3' Leaves, plant was grown at constant 23 700bp Contig12118       PREDICTED:ubiquitin-conjugatingenzymeE22-likeisoform1[Brachypodiumdistachyon] 321 1.06471e-85
HX050152 whxn_35015_a02r 2012 3' Leaves, plant was grown at constant 23 779bp Contig5005       PREDICTED:CBSdomain-containingproteinCBSX3,mitochondrial-like[Brachypodiumdistachyon] 300 3.13792e-79
HX050153 whxn_37015_a02r 2012 3' Leaves, plant was grown at constant 23 481bp Contig10901       glutathionetransferase[Triticumaestivum] 142 4.83586e-32
HX050154 whxn_38015_a02r 2012 3' Leaves, plant was grown at constant 23 580bp Contig6471       predictedprotein[Hordeumvulgaresubsp.vulgare] 297 1.73297e-78
HX050155 whxn_39015_a02r 2012 3' Leaves, plant was grown at constant 23 583bp Contig34058       PREDICTED:pantothenatekinase2-like[Brachypodiumdistachyon] 277 1.88727e-72
HX050156 whxn_40015_a02r 2012 3' Leaves, plant was grown at constant 23 509bp Contig34265       RecName:Full=PhotosystemII10kDapolypeptide,chloroplastic;Flags:Precursor 253 1.98269e-65
HX050157 whxn_4015_a02r 2012 3' Leaves, plant was grown at constant 23 633bp Contig7507       PREDICTED:proteinTIFY6B-like[Brachypodiumdistachyon] 207 2.27371e-51
HX050158 whxn_5015_a02r 2012 3' Leaves, plant was grown at constant 23 352bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 48 0.000740651
HX050159 whxn_6015_a02r 2012 3' Leaves, plant was grown at constant 23 383bp Contig15966       cysteineproteinase[Triticumaestivum] 76 3.29863e-12
HX050160 whxn_7015_a02r 2012 3' Leaves, plant was grown at constant 23 476bp Contig35972       PREDICTED:40SribosomalproteinS17-2-like[Brachypodiumdistachyon] 228 6.76178e-58
HX050185 whxn_10016_a03r 2012 3' Leaves, plant was grown at constant 23 625bp       60SribosomalproteinL23[Arabidopsisthaliana] 59 7.48903e-07
HX050186 whxn_1016_a03r 2012 3' Leaves, plant was grown at constant 23 517bp Contig32607       PhotosystemII10kDapolypeptide,chloroplast[Salmosalar] 247 1.13699e-63
HX050187 whxn_11016_a03r 2012 3' Leaves, plant was grown at constant 23 603bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 162 7.41698e-38
HX050188 whxn_12016_a03r 2012 3' Leaves, plant was grown at constant 23 633bp Contig33680       predictedprotein[Hordeumvulgaresubsp.vulgare] 286 2.98828e-75
HX050189 whxn_16016_a03r 2012 3' Leaves, plant was grown at constant 23 652bp       PREDICTED:uncharacterizedproteinLOC100845442[Brachypodiumdistachyon] 207 2.48592e-51
HX050190 whxn_17016_a03r 2012 3' Leaves, plant was grown at constant 23 575bp Contig19689       predictedprotein[Hordeumvulgaresubsp.vulgare] 298 5.85517e-79
HX050191 whxn_20016_a03r 2012 3' Leaves, plant was grown at constant 23 630bp Contig16474       aci-reductone-dioxygenase-likeprotein[Triticumaestivum] 337 1.46379e-90
HX050192 whxn_2016_a03r 2012 3' Leaves, plant was grown at constant 23 774bp Contig6899       predictedprotein[Hordeumvulgaresubsp.vulgare] 444 1.74267e-122
HX050193 whxn_23016_a03r 2012 3' Leaves, plant was grown at constant 23 537bp       RecName:Full=Signalrecognitionparticle54kDaprotein1;Short=SRP54 294 9.03341e-78
HX050194 whxn_24016_a03r 2012 3' Leaves, plant was grown at constant 23 666bp Contig5007       predictedprotein[Hordeumvulgaresubsp.vulgare] 269 5.58669e-70
HX050195 whxn_26016_a03r 2012 3' Leaves, plant was grown at constant 23 589bp Contig385       predictedprotein[Hordeumvulgaresubsp.vulgare] 264 1.30811e-68
HX050196 whxn_27016_a03r 2012 3' Leaves, plant was grown at constant 23 636bp Contig20649       predictedprotein[Hordeumvulgaresubsp.vulgare] 269 6.44803e-70
HX050197 whxn_28016_a03r 2012 3' Leaves, plant was grown at constant 23 523bp Contig20649       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 7.31814e-71
HX050198 whxn_30016_a03r 2012 3' Leaves, plant was grown at constant 23 550bp Contig31132       predictedprotein[Hordeumvulgaresubsp.vulgare] 220 2.29244e-55
HX050199 whxn_32016_a03r 2012 3' Leaves, plant was grown at constant 23 717bp Contig7591       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 403 2.88319e-110
HX050200 whxn_33016_a03r 2012 3' Leaves, plant was grown at constant 23 126bp       hypotheticalproteinARALYDRAFT_489877[Arabidopsislyratasubsp.lyrata] 80 2.29221e-13
HX050201 whxn_34016_a03r 2012 3' Leaves, plant was grown at constant 23 692bp Contig7689       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 396 4.30487e-108
HX050202 whxn_35016_a03r 2012 3' Leaves, plant was grown at constant 23 621bp Contig9947       predictedprotein[Hordeumvulgaresubsp.vulgare] 271 1.25395e-70
HX050203 whxn_36016_a03r 2012 3' Leaves, plant was grown at constant 23 557bp Contig15969       predictedprotein[Hordeumvulgaresubsp.vulgare] 261 7.28263e-68
HX050204 whxn_38016_a03r 2012 3' Leaves, plant was grown at constant 23 458bp Contig32128       PREDICTED:uncharacterizedproteinLOC100840648[Brachypodiumdistachyon] 161 1.01057e-37
HX050205 whxn_39016_a03r 2012 3' Leaves, plant was grown at constant 23 523bp Contig20503       ribulose-1,5-bisphosphatecarboxylaseactivase[Triticumaestivum] 184 1.21874e-63
HX050206 whxn_9016_a03r 2012 3' Leaves, plant was grown at constant 23 640bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 322 5.04355e-86
HX050234 whxn_1016_a04r 2012 3' Leaves, plant was grown at constant 23 505bp Contig32970       RecName:Full=PhotosystemII10kDapolypeptide,chloroplastic;Flags:Precursor 245 3.1007e-63
HX050235 whxn_12016_a04r 2012 3' Leaves, plant was grown at constant 23 647bp Contig15971       predictedprotein[Hordeumvulgaresubsp.vulgare] 229 4.5633e-58
HX050236 whxn_13016_a04r 2012 3' Leaves, plant was grown at constant 23 647bp Contig15971       predictedprotein[Hordeumvulgaresubsp.vulgare] 229 4.5633e-58
HX050237 whxn_14016_a04r 2012 3' Leaves, plant was grown at constant 23 619bp Contig14936       predictedprotein[Hordeumvulgaresubsp.vulgare] 331 9.93076e-89
HX050238 whxn_16016_a04r 2012 3' Leaves, plant was grown at constant 23 226bp Contig36764       predictedprotein[Hordeumvulgaresubsp.vulgare] 92 5.8869e-17
HX050239 whxn_17016_a04r 2012 3' Leaves, plant was grown at constant 23 136bp Contig33125            
HX050240 whxn_20016_a04r 2012 3' Leaves, plant was grown at constant 23 167bp Contig29925       predictedprotein[Hordeumvulgaresubsp.vulgare] 74 1.25436e-11
HX050241 whxn_2016_a04r 2012 3' Leaves, plant was grown at constant 23 712bp Contig16446       predictedprotein[Hordeumvulgaresubsp.vulgare] 121 1.15429e-48
HX050242 whxn_21016_a04r 2012 3' Leaves, plant was grown at constant 23 174bp Contig22987       hypotheticalprotein[MonosigabrevicollisMX1] 46 0.0047473
HX050243 whxn_23016_a04r 2012 3' Leaves, plant was grown at constant 23 591bp Contig35258       RecName:Full=PhotosystemIreactioncentersubunitXI,chloroplastic;Short=PSI-L;AltName:Full=PSIsubunitV;Flags:Precursor 358 5.26087e-97
HX050244 whxn_24016_a04r 2012 3' Leaves, plant was grown at constant 23 446bp Contig13419       PREDICTED:uncharacterizedproteinLOC100841111[Brachypodiumdistachyon] 112 4.19432e-23
HX050245 whxn_25016_a04r 2012 3' Leaves, plant was grown at constant 23 166bp            
HX050246 whxn_28016_a04r 2012 3' Leaves, plant was grown at constant 23 635bp       PREDICTED:uncharacterizedproteinLOC100837530[Brachypodiumdistachyon] 144 1.83408e-32
HX050247 whxn_29016_a04r 2012 3' Leaves, plant was grown at constant 23 631bp Contig2671       putativecarbonicanhydrase[Triticumturgidumsubsp.durumxSecalecereale] 266 4.12449e-69
HX050248 whxn_3016_a04r 2012 3' Leaves, plant was grown at constant 23 727bp Contig6474       RecName:Full=Phosphoribulokinase,chloroplastic;Short=PRK;Short=PRKase;AltName:Full=Phosphopentokinase;Flags:Precursor 358 8.46661e-97
HX050249 whxn_31016_a04r 2012 3' Leaves, plant was grown at constant 23 664bp Contig26888       glyceraldehyde-3-phosphatedehydrogenase[Triticumaestivum] 320 2.11312e-85
HX050250 whxn_32016_a04r 2012 3' Leaves, plant was grown at constant 23 668bp Contig26888       glyceraldehyde-3-phosphatedehydrogenase[Triticumaestivum] 320 2.13769e-85
HX050251 whxn_33016_a04r 2012 3' Leaves, plant was grown at constant 23 441bp Contig35211       predictedprotein[Hordeumvulgaresubsp.vulgare] 252 2.53758e-65
HX050252 whxn_34016_a04r 2012 3' Leaves, plant was grown at constant 23 644bp Contig19505       predictedprotein[Hordeumvulgaresubsp.vulgare] 274 2.08355e-71
HX050253 whxn_35016_a04r 2012 3' Leaves, plant was grown at constant 23 619bp Contig1121       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 292 3.96935e-77
HX050254 whxn_36016_a04r 2012 3' Leaves, plant was grown at constant 23 193bp Contig1121       PREDICTED:GTP-bindingnuclearproteinRan-3-like[Brachypodiumdistachyon] 141 8.44476e-32
HX050255 whxn_39016_a04r 2012 3' Leaves, plant was grown at constant 23 498bp Contig7302       thioredoxinF-type,chloroplastprecursor,putative,expressed[Triticumaestivum] 287 7.14833e-76
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