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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 9897
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whem_1015_a01f 2012 5' Dormant seed with water absorption 94bp            
whem_11015_a01f 2012 5' Dormant seed with water absorption 387bp       PREDICTED:3-hydroxy-3-methylglutaryl-coenzymeAreductase3-like[Brachypodiumdistachyon] 241 5.90471e-62
whem_12015_a01f 2012 5' Dormant seed with water absorption 455bp Contig35837       PREDICTED:40SribosomalproteinS27-like[Brachypodiumdistachyon] 184 1.11963e-44
whem_13015_a01f 2012 5' Dormant seed with water absorption 103bp Contig35837       PREDICTED:40SribosomalproteinS27-2-like[Brachypodiumdistachyon] 56 4.72822e-06
whem_14015_a01f 2012 5' Dormant seed with water absorption 324bp Contig21088       ChainM,LocalizationOfTheSmallSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 195 4.91607e-48
whem_17015_a01f 2012 5' Dormant seed with water absorption 96bp       PREDICTED:DNA-directedRNApolymeraseIsubunitRPA2[Brachypodiumdistachyon] 69 3.05155e-10
whem_18015_a01f 2012 5' Dormant seed with water absorption 131bp       PREDICTED:DNA-directedRNApolymeraseIsubunitRPA2[Brachypodiumdistachyon] 83 2.06057e-14
whem_20015_a01f 2012 5' Dormant seed with water absorption 442bp Contig31216       predictedprotein[Hordeumvulgaresubsp.vulgare] 213 2.22819e-53
whem_3015_a01f 2012 5' Dormant seed with water absorption 211bp       gamma-thionin[Hordeumvulgaresubsp.vulgare] 63 2.19407e-08
whem_4015_a01f 2012 5' Dormant seed with water absorption 431bp       gamma-thionin[Hordeumvulgaresubsp.vulgare] 142 3.74605e-32
whem_9015_a01f 2012 5' Dormant seed with water absorption 372bp Contig19506       predictedprotein[Hordeumvulgaresubsp.vulgare] 103 2.55007e-20
whem_1015_a01r 2012 3' Dormant seed with water absorption 611bp Contig32442       PREDICTED:40SribosomalproteinSA-like[Brachypodiumdistachyon] 198 1.27516e-48
whem_11015_a01r 2012 3' Dormant seed with water absorption 532bp       PREDICTED:3-hydroxy-3-methylglutaryl-coenzymeAreductase3-like[Brachypodiumdistachyon] 93 2.24062e-17
whem_12015_a01r 2012 3' Dormant seed with water absorption 89bp Contig25975       predictedprotein[Hordeumvulgaresubsp.vulgare] 63 2.88168e-08
whem_14015_a01r 2012 3' Dormant seed with water absorption 632bp Contig21088       ChainM,LocalizationOfTheSmallSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 304 1.36667e-80
whem_17015_a01r 2012 3' Dormant seed with water absorption 70bp       PREDICTED:DNA-directedRNApolymeraseIsubunitRPA2[Brachypodiumdistachyon] 49 0.000400837
whem_20015_a01r 2012 3' Dormant seed with water absorption 616bp Contig24345       predictedprotein[Hordeumvulgaresubsp.vulgare] 270 2.71698e-70
whem_3015_a01r 2012 3' Dormant seed with water absorption 317bp       gamma-thionin[Hordeumvulgaresubsp.vulgare] 141 1.10849e-31
whem_4015_a01r 2012 3' Dormant seed with water absorption 443bp       gamma-thionin[Hordeumvulgaresubsp.vulgare] 142 3.80114e-32
whem_5015_a01r 2012 3' Dormant seed with water absorption 169bp       SNF1-relatedproteinkinase[Hordeumvulgaresubsp.vulgare] 120 1.98703e-25
whem_6015_a01r 2012 3' Dormant seed with water absorption 510bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 265 3.84243e-69
whem_9015_a01r 2012 3' Dormant seed with water absorption 350bp Contig19506       predictedprotein[Hordeumvulgaresubsp.vulgare] 103 2.54359e-20
whem_10015_a02f 2012 5' Dormant seed with water absorption 302bp Contig26608       unknown[Lotusjaponicus] 35 6.44838
whem_1015_a02f 2012 5' Dormant seed with water absorption 248bp Contig6148       cyc07[Triticumaestivum] 139 3.13948e-31
whem_11015_a02f 2012 5' Dormant seed with water absorption 492bp       PREDICTED:luminal-bindingprotein3-like[Brachypodiumdistachyon] 322 3.46784e-86
whem_12015_a02f 2012 5' Dormant seed with water absorption 544bp Contig3876       PREDICTED:ubiquitin-60SribosomalproteinL40-2-like[Brachypodiumdistachyon] 241 9.41694e-62
whem_15015_a02f 2012 5' Dormant seed with water absorption 500bp Contig19994       heatshockprotein90[Triticumaestivum] 327 8.14089e-88
whem_17015_a02f 2012 5' Dormant seed with water absorption 388bp       conservedhypotheticalprotein[NeosporacaninumLiverpool] 47 0.00125136
whem_18015_a02f 2012 5' Dormant seed with water absorption 593bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 355 5.81658e-96
whem_20015_a02f 2012 5' Dormant seed with water absorption 576bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 4.6501e-68
whem_6015_a02f 2012 5' Dormant seed with water absorption 611bp Contig1215       putativeglycoprotein3-alpha-L-fucosyltransferase[Triticumaestivum] 331 1.72634e-100
whem_7015_a02f 2012 5' Dormant seed with water absorption 551bp Contig7933       fructose-bisphosphatealdolase[Triticumaestivum] 231 7.76604e-59
whem_9015_a02f 2012 5' Dormant seed with water absorption 323bp Contig19506       predictedprotein[Hordeumvulgaresubsp.vulgare] 94 1.18101e-17
whem_10015_a02r 2012 3' Dormant seed with water absorption 257bp Contig26608       unknown[Lotusjaponicus] 35 6.55939
whem_1015_a02r 2012 3' Dormant seed with water absorption 628bp Contig28346       PREDICTED:40SribosomalproteinS3a-like[Brachypodiumdistachyon] 262 5.98441e-68
whem_11015_a02r 2012 3' Dormant seed with water absorption 578bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 297 1.32689e-78
whem_12015_a02r 2012 3' Dormant seed with water absorption 513bp       PREDICTED:ubiquitin-60SribosomalproteinL40-2-like[Brachypodiumdistachyon] 262 4.24831e-68
whem_15015_a02r 2012 3' Dormant seed with water absorption 688bp Contig10014       heatshockprotein90[Triticumaestivum] 355 6.37912e-96
whem_18015_a02r 2012 3' Dormant seed with water absorption 673bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 4.13267e-97
whem_19015_a02r 2012 3' Dormant seed with water absorption 627bp       LOC100280744precursor[Zeamays] 120 4.79704e-25
whem_20015_a02r 2012 3' Dormant seed with water absorption 554bp Contig8623       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 4.18892e-68
whem_5015_a02r 2012 3' Dormant seed with water absorption 465bp       sphingosinekinase-2variant[Homosapiens] 41 0.155163
whem_6015_a02r 2012 3' Dormant seed with water absorption 605bp Contig16469       putativeglycoprotein3-alpha-L-fucosyltransferase[Triticumaestivum] 332 5.49396e-89
whem_7015_a02r 2012 3' Dormant seed with water absorption 537bp Contig7933       fructose-bisphosphatealdolase[Triticumaestivum] 215 6.96493e-54
whem_10016_a03f 2012 5' Dormant seed with water absorption 484bp       PREDICTED:serinecarboxypeptidase-like3-like[Brachypodiumdistachyon] 288 5.60007e-76
whem_11016_a03f 2012 5' Dormant seed with water absorption 576bp Contig8973       putativeeukaryoticpeptidechainreleasefactorsubunit1-3[Triticumaestivum] 381 5.25906e-104
whem_12016_a03f 2012 5' Dormant seed with water absorption 466bp       glutamyl-tRNA(Gln)amidotransferasesubunitA[Plasmodiumchabaudichabaudi] 36 2.93921
whem_14016_a03f 2012 5' Dormant seed with water absorption 492bp Contig23446       predictedprotein[Hordeumvulgaresubsp.vulgare] 306 1.50773e-81
whem_16016_a03f 2012 5' Dormant seed with water absorption 467bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 308 5.21063e-82
whem_18016_a03f 2012 5' Dormant seed with water absorption 410bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 261 7.20457e-68
whem_19016_a03f 2012 5' Dormant seed with water absorption 585bp Contig11598       hypotheticalproteinMELLADRAFT_94739[Melampsoralarici-populina98AG31] 116 1.15448e-33
whem_2016_a03f 2012 5' Dormant seed with water absorption 371bp Contig28120       putativeLPXTG-motifcellwallanchor[Micromonosporalupinistr.Lupac08] 40 0.266167
whem_4016_a03f 2012 5' Dormant seed with water absorption 534bp Contig6780       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 1.21244e-98
whem_5016_a03f 2012 5' Dormant seed with water absorption 87bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 38 0.995648
whem_7016_a03f 2012 5' Dormant seed with water absorption 299bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 207 1.24273e-51
whem_9016_a03f 2012 5' Dormant seed with water absorption 473bp Contig20391       predictedprotein[Hordeumvulgaresubsp.vulgare] 211 8.59206e-53
whem_10016_a03r 2012 3' Dormant seed with water absorption 619bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 277 1.72578e-72
whem_1016_a03r 2012 3' Dormant seed with water absorption 372bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 250 1.29158e-64
whem_11016_a03r 2012 3' Dormant seed with water absorption 667bp Contig8973       putativeeukaryoticpeptidechainreleasefactorsubunit1-3[Triticumaestivum] 233 4.48847e-59
whem_12016_a03r 2012 3' Dormant seed with water absorption 585bp       HypotheticalproteinGL50803_17577[GiardialambliaATCC50803] 39 0.673366
whem_14016_a03r 2012 3' Dormant seed with water absorption 545bp Contig10339       predictedprotein[Hordeumvulgaresubsp.vulgare] 266 3.57014e-69
whem_16016_a03r 2012 3' Dormant seed with water absorption 666bp Contig1216       PREDICTED:DNArepairproteinrecAhomolog1,chloroplastic-likeisoform2[Brachypodiumdistachyon] 297 1.93795e-78
whem_18016_a03r 2012 3' Dormant seed with water absorption 612bp       PREDICTED:golgincandidate6-like[Brachypodiumdistachyon] 198 9.90509e-49
whem_19016_a03r 2012 3' Dormant seed with water absorption 599bp Contig11598       Tar1p[Medicagotruncatula] 104 8.78428e-44
whem_2016_a03r 2012 3' Dormant seed with water absorption 605bp       wiskott-Aldrichsyndromeprotein[ExophialadermatitidisNIH/UT8656] 41 0.252985
whem_4016_a03r 2012 3' Dormant seed with water absorption 630bp Contig6780       predictedprotein[Hordeumvulgaresubsp.vulgare] 355 6.78382e-96
whem_5016_a03r 2012 3' Dormant seed with water absorption 498bp       wali6[Triticumaestivum] 121 6.78439e-26
whem_6016_a03r 2012 3' Dormant seed with water absorption 416bp       predictedprotein[LaccariabicolorS238N-H82] 43 0.0234151
whem_7016_a03r 2012 3' Dormant seed with water absorption 595bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 252 6.93495e-65
whem_9016_a03r 2012 3' Dormant seed with water absorption 497bp Contig20391       predictedprotein[Hordeumvulgaresubsp.vulgare] 212 5.00804e-53
whem_10016_a04f 2012 5' Dormant seed with water absorption 439bp Contig5450       pre-mRNAprocessingfactor[Triticumaestivum] 214 7.65817e-54
whem_12016_a04f 2012 5' Dormant seed with water absorption 384bp Contig12481       PREDICTED:carbamoyl-phosphatesynthasesmallchain-like[Brachypodiumdistachyon] 253 1.50759e-65
whem_14016_a04f 2012 5' Dormant seed with water absorption 505bp       translationinitiationfactor[Triticumaestivum] 232 4.7522e-59
whem_15016_a04f 2012 5' Dormant seed with water absorption 495bp Contig19582       predictedprotein[Hordeumvulgaresubsp.vulgare] 323 1.18643e-86
whem_16016_a04f 2012 5' Dormant seed with water absorption 408bp Contig3545       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 203 1.37068e-50
whem_18016_a04f 2012 5' Dormant seed with water absorption 556bp Contig4614       putativehighmobilitygroupprotein[Triticumaestivum] 217 1.18324e-54
whem_19016_a04f 2012 5' Dormant seed with water absorption 226bp            
whem_20016_a04f 2012 5' Dormant seed with water absorption 562bp Contig9458       PREDICTED:uncharacterizedproteinLOC100830908[Brachypodiumdistachyon] 318 6.68009e-85
whem_2016_a04f 2012 5' Dormant seed with water absorption 551bp       PREDICTED:probablehelicasesenataxin-like[Brachypodiumdistachyon] 61 1.81545e-07
whem_4016_a04f 2012 5' Dormant seed with water absorption 299bp Contig37051       predictedprotein[Hordeumvulgaresubsp.vulgare] 183 2.50984e-44
whem_5016_a04f 2012 5' Dormant seed with water absorption 65bp Contig15965       predictedprotein[Hordeumvulgaresubsp.vulgare] 47 0.00106484
whem_6016_a04f 2012 5' Dormant seed with water absorption 359bp       dipeptide-bindingproteinDppE[Carnobacteriumsp.17-4] 36 3.77448
whem_8016_a04f 2012 5' Dormant seed with water absorption 123bp            
whem_9016_a04f 2012 5' Dormant seed with water absorption 482bp Contig21407       RecName:Full=ThioredoxinH-type;Short=Trx-H;AltName:Full=TrxTa 231 7.91577e-59
whem_10016_a04r 2012 3' Dormant seed with water absorption 593bp Contig10558       predictedprotein[Hordeumvulgaresubsp.vulgare] 229 3.68577e-58
whem_1016_a04r 2012 3' Dormant seed with water absorption 528bp Contig30954       PREDICTED:glutathioneS-transferasetheta-1-like[Brachypodiumdistachyon] 259 2.30836e-67
whem_12016_a04r 2012 3' Dormant seed with water absorption 586bp Contig12481       PREDICTED:carbamoyl-phosphatesynthasesmallchain-like[Brachypodiumdistachyon] 298 6.15803e-79
whem_14016_a04r 2012 3' Dormant seed with water absorption 352bp Contig8091       translationinitiationfactor[Triticumaestivum] 118 7.6408e-25
whem_15016_a04r 2012 3' Dormant seed with water absorption 699bp       hypotheticalprotein[OryzasativaIndicaGroup] 368 7.51664e-100
whem_16016_a04r 2012 3' Dormant seed with water absorption 649bp Contig10868       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 348 6.82459e-94
whem_18016_a04r 2012 3' Dormant seed with water absorption 585bp Contig4614       putativehighmobilitygroupprotein[Triticumaestivum] 217 1.38144e-54
whem_19016_a04r 2012 3' Dormant seed with water absorption 197bp       PREDICTED:60SribosomalproteinL24-like[Brachypodiumdistachyon] 46 0.00282163
whem_20016_a04r 2012 3' Dormant seed with water absorption 563bp Contig9458       PREDICTED:uncharacterizedproteinLOC100830908[Brachypodiumdistachyon] 177 1.43522e-42
whem_2016_a04r 2012 3' Dormant seed with water absorption 582bp       PREDICTED:probablehelicasesenataxin-like[Brachypodiumdistachyon] 61 2.1257e-07
whem_4016_a04r 2012 3' Dormant seed with water absorption 644bp Contig37051       predictedprotein[Hordeumvulgaresubsp.vulgare] 259 4.0663e-67
whem_5016_a04r 2012 3' Dormant seed with water absorption 621bp Contig15965       coronatineinsensitive2-likeprotein[Triticumaestivum] 276 3.84463e-72
whem_6016_a04r 2012 3' Dormant seed with water absorption 338bp       dipeptide-bindingproteinDppE[Carnobacteriumsp.17-4] 36 4.89191
whem_8016_a04r 2012 3' Dormant seed with water absorption 34bp            
whem_9016_a04r 2012 3' Dormant seed with water absorption 444bp Contig21407       RecName:Full=ThioredoxinH-type;Short=Trx-H;AltName:Full=TrxTa 243 1.58226e-62
whem_10031_a05f 2012 5' Dormant seed with water absorption 165bp       putativehistoneacetyltransferaseGCN5[Hordeumvulgare] 86 2.45013e-15
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