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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 12793
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
CJ797202 whsct10a01 5' Root 433bp       ribosomal protein L30 [Triticum aestivum] 169 7.1038e-11
CJ797203 whsct10a03 5' Root 641bp       H0211A12.16 [Oryza sativa (indica cultivar-group)] 274 4.73715e-23
CJ797204 whsct10a05 5' Root 664bp       hypothetical protein OsI_005219 [Oryza sativa (indica cultivar-group)] 257 4.51283e-21
CJ797205 whsct10a07 5' Root 720bp       unknown [Zea mays] 213 5.73062e-16
CJ797206 whsct10a09 5' Root 730bp       Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 424 1.92241e-40
CJ797207 whsct10a11 5' Root 649bp       unknown [Zea mays] 417 1.27241e-39
CJ797208 whsct10a13 5' Root 694bp       hypothetical protein OsI_018887 [Oryza sativa (indica cultivar-group)] 800 1.16198e-83
CJ797209 whsct10a15 5' Root 672bp       hypothetical protein OsI_029066 [Oryza sativa (indica cultivar-group)] 294 2.268e-25
CJ797210 whsct10a17 5' Root 679bp       hypothetical protein OsI_009416 [Oryza sativa (indica cultivar-group)] 195 7.03183e-14
CJ797211 whsct10a21 5' Root 718bp            
CJ797212 whsct10a23 5' Root 475bp       Os07g0640100 [Oryza sativa (japonica cultivar-group)] 463 5.8755e-45
CJ797213 whsct10c01 5' Root 600bp       S-adenosylmethionine decarboxylase [Triticum turgidum] 421 4.32215e-40
CJ797214 whsct10c03 5' Root 745bp       hypothetical protein OsI_021120 [Oryza sativa (indica cultivar-group)] 380 2.46183e-35
CJ797215 whsct10c05 5' Root 697bp       Os07g0209000 [Oryza sativa (japonica cultivar-group)] 408 1.38917e-38
CJ797216 whsct10c07 5' Root 719bp       hypothetical protein OsJ_018862 [Oryza sativa (japonica cultivar-group)] 191 2.02022e-13
CJ797217 whsct10c09 5' Root 169bp            
CJ797218 whsct10c11 5' Root 593bp            
CJ797219 whsct10c13 5' Root 289bp       hypothetical protein OsJ_033272 [Oryza sativa (japonica cultivar-group)] 100 0.00709062
CJ797220 whsct10c15 5' Root 740bp       OSIGBa0140A01.7 [Oryza sativa (indica cultivar-group)] 330 3.01183e-32
CJ797221 whsct10c17 5' Root 755bp       unknown [Zea mays] 81 1.14512
CJ797222 whsct10c19 5' Root 369bp            
CJ797223 whsct10c21 5' Root 713bp       hypothetical protein OsI_007430 [Oryza sativa (indica cultivar-group)] 353 3.34949e-32
CJ797224 whsct10c23 5' Root 445bp       hypothetical protein [Entamoeba dispar SAW760] 78 2.51553
CJ797225 whsct10e01 5' Root 523bp       Cytochrome c oxidase polypeptide Vc (Cytochrome c oxidase subunit 5c) 304 1.56891e-26
CJ797226 whsct10e05 5' Root 551bp       Histone H2B.3 447 5.35913e-43
CJ797227 whsct10e07 5' Root 274bp            
CJ797228 whsct10e09 5' Root 758bp       pyruvate decarboxylase [Saccharum officinarum] 714 7.79513e-74
CJ797229 whsct10e15 5' Root 733bp       DNA repair and recombination protein,mitochondrial precursor [Leishmania infantum JPCM5] 78 2.54256
CJ797230 whsct10e17 5' Root 752bp       PREDICTED: hypothetical protein [Rattus norvegicus] 118 5.81748e-05
CJ797231 whsct10e19 5' Root 734bp       mitochondrial F1-ATPase gamma subunit [Ipomoea nil] 206 3.62534e-15
CJ797232 whsct10e21 5' Root 712bp       Elongation factor 1-alpha (EF-1-alpha) 954 1.9277e-101
CJ797233 whsct10e23 5' Root 153bp       hypothetical protein CHGG_04053 [Chaetomium globosum CBS 148.51] 73 9.72886
CJ797234 whsct10g01 5' Root 624bp       unknown [Zea mays] 210 1.25692e-15
CJ797235 whsct10g03 5' Root 337bp       Os04g0349500 [Oryza sativa (japonica cultivar-group)] 220 8.74807e-17
CJ797236 whsct10g05 5' Root 285bp       unnamed protein product [Podospora anserina] 75 5.79203
CJ797237 whsct10g07 5' Root 712bp       hypothetical protein OsJ_034077 [Oryza sativa (japonica cultivar-group)] 417 1.26714e-39
CJ797238 whsct10g09 5' Root 210bp       envelope glycoprotein [Human immunodeficiency virus 1] 81 1.14174
CJ797239 whsct10g13 5' Root 122bp       unknown [Zea mays] 207 2.82969e-15
CJ797240 whsct10g15 5' Root 401bp       Os01g0118000 [Oryza sativa (japonica cultivar-group)] 331 1.17578e-29
CJ797241 whsct10g17 5' Root 567bp       hypothetical protein OsJ_023460 [Oryza sativa (japonica cultivar-group)] 165 2.07378e-10
CJ797242 whsct10g19 5' Root 536bp       cereal cyst nematode resistance protein [Triticum aestivum] 665 2.92152e-68
CJ797243 whsct10g21 5' Root 433bp       Elongation factor 1-alpha (EF-1-alpha) 399 1.52473e-37
CJ797244 whsct10g23 5' Root 659bp       unnamed protein product [Vitis vinifera] 155 3.00648e-09
CJ797245 whsct10i03 5' Root 714bp       Os05g0489600 [Oryza sativa (japonica cultivar-group)] 472 5.95198e-46
CJ797246 whsct10i05 5' Root 695bp       unknown [Zea mays] 572 1.44797e-57
CJ797247 whsct10i07 5' Root 480bp       unknown [Zea mays] 496 8.77367e-49
CJ797248 whsct10i09 5' Root 745bp       unknown [Zea mays] 118 5.82397e-05
CJ797249 whsct10i11 5' Root 704bp       Os01g0976000 [Oryza sativa (japonica cultivar-group)] 350 1.17219e-34
CJ797250 whsct10i13 5' Root 726bp       unknown [Zea mays] 778 3.02958e-81
CJ797251 whsct10i15 5' Root 525bp       Os07g0471000 [Oryza sativa (japonica cultivar-group)] 371 2.74006e-34
CJ797252 whsct10i21 5' Root 386bp       protease inhibitor-like protein [Triticum aestivum] 110 0.000489799
CJ797253 whsct10i23 5' Root 454bp       Cytochrome c 197 4.12343e-14
CJ797254 whsct10k01 5' Root 704bp       Translationally-controlled tumor protein homolog (TCTP) 338 1.78972e-30
CJ797255 whsct10k03 5' Root 681bp       hypothetical protein OsI_029017 [Oryza sativa (indica cultivar-group)] 251 3.19035e-20
CJ797256 whsct10k05 5' Root 705bp       putative fructose 1-,6-biphosphate aldolase [Triticum aestivum] 414 2.8063e-39
CJ797257 whsct10k07 5' Root 731bp       unknown [Zea mays] 267 4.05428e-22
CJ797258 whsct10k09 5' Root 276bp       40S ribosomal protein S11 [Elaeis guineensis] 105 0.00188395
CJ797259 whsct10k11 5' Root 530bp       putative 40S ribosomal protein S3 [Triticum aestivum] 465 3.36188e-45
CJ797260 whsct10k13 5' Root 746bp       hypothetical protein OsJ_028773 [Oryza sativa (japonica cultivar-group)] 342 6.27493e-31
CJ797261 whsct10k15 5' Root 732bp       triticain alpha [Triticum aestivum] 220 8.79665e-17
CJ797262 whsct10k17 5' Root 727bp       PREDICTED: similar to hCG2042958 [Ornithorhynchus anatinus] 88 0.174686
CJ797263 whsct10k19 5' Root 686bp       hypothetical protein OsI_022289 [Oryza sativa (indica cultivar-group)] 237 9.21307e-19
CJ797264 whsct10k23 5' Root 355bp       hypothetical protein [Oryza sativa Japonica Group] 77 3.3752
CJ797265 whsct10m01 5' Root 589bp       hypothetical protein OsI_006511 [Oryza sativa (indica cultivar-group)] 309 4.23025e-27
CJ797266 whsct10m03 5' Root 732bp       Os02g0654500 [Oryza sativa (japonica cultivar-group)] 1029 3.80721e-110
CJ797267 whsct10m07 5' Root 647bp       vanadium-binding protein 4 [Ascidia sydneiensis samea] 106 0.0014694
CJ797268 whsct10m09 5' Root 732bp            
CJ797269 whsct10m11 5' Root 184bp            
CJ797270 whsct10m13 5' Root 730bp       hypothetical protein OsJ_033079 [Oryza sativa (japonica cultivar-group)] 258 3.42979e-21
CJ797271 whsct10m15 5' Root 698bp       Os07g0193000 [Oryza sativa (japonica cultivar-group)] 420 7.24308e-40
CJ797272 whsct10m17 5' Root 727bp       hypothetical protein OsI_007157 [Oryza sativa (indica cultivar-group)] 139 4.85519e-07
CJ797273 whsct10m19 5' Root 662bp       Phosphoglucomutase, cytoplasmic (PGM) (Glucose phosphomutase) 164 2.75261e-10
CJ797274 whsct10m21 5' Root 702bp       Os09g0109500 [Oryza sativa (japonica cultivar-group)] 311 2.46842e-27
CJ797275 whsct10m23 5' Root 513bp       unknown [Zea mays] 312 1.86937e-27
CJ797276 whsct10o01 5' Root 302bp            
CJ797277 whsct10o05 5' Root 403bp       Os01g0277700 [Oryza sativa (japonica cultivar-group)] 336 3.12992e-30
CJ797278 whsct10o07 5' Root 465bp       unknown [Zea mays] 384 8.2771e-36
CJ797279 whsct10o09 5' Root 329bp       predicted protein [Physcomitrella patens subsp. patens] 86 0.302788
CJ797280 whsct10o11 5' Root 425bp       unknown [Zea mays] 435 1.01341e-41
CJ797281 whsct10o13 5' Root 485bp       Os03g0206600 [Oryza sativa (japonica cultivar-group)] 181 2.86466e-12
CJ797282 whsct10o15 5' Root 698bp       conserved hypothetical protein [Pediculus humanus corporis] 78 2.69431
CJ797283 whsct10o19 5' Root 500bp       hypothetical protein OsJ_012997 [Oryza sativa (japonica cultivar-group)] 428 6.60725e-41
CJ797284 whsct10b03 5' Root 112bp       hypothetical protein OsJ_029688 [Oryza sativa (japonica cultivar-group)] 165 2.12386e-10
CJ797285 whsct10b11 5' Root 629bp       unknown [Picea sitchensis] 106 0.00146984
CJ797286 whsct10b13 5' Root 673bp       hypothetical protein OsI_009493 [Oryza sativa (indica cultivar-group)] 603 7.84728e-61
CJ797287 whsct10b15 5' Root 707bp       hypothetical protein OsI_036960 [Oryza sativa (indica cultivar-group)] 362 2.95543e-33
CJ797288 whsct10b17 5' Root 622bp       Histone H2A.2.1 252 1.70176e-20
CJ797289 whsct10b21 5' Root 673bp       putative DNA-binding protein [Nocardia farcinica IFM 10152] 86 0.30281
CJ797290 whsct10b23 5' Root 661bp       ferrochelatase [Hordeum vulgare] 351 5.59441e-32
CJ797291 whsct10d01 5' Root 419bp       60S ribosomal protein l28 [Oryza sativa (indica cultivar-group)] 393 7.65281e-37
CJ797292 whsct10d03 5' Root 674bp       hypothetical protein OsJ_034873 [Oryza sativa (japonica cultivar-group)] 101 0.00542632
CJ797293 whsct10d05 5' Root 729bp       olfactory receptor, family 51, subfamily V, member 1 (predicted) [Callicebus moloch] 77 3.36159
CJ797294 whsct10d07 5' Root 559bp       BAR adaptor protein Hob1 [Schizosaccharomyces pombe] 96 0.020691
CJ797295 whsct10d09 5' Root 398bp       unknown [Zea mays] 161 6.06668e-10
CJ797296 whsct10d13 5' Root 736bp       translation initiation factor 5A [Secale sylvestre] 388 2.8966e-36
CJ797297 whsct10d15 5' Root 538bp       Os08g0398000 [Oryza sativa (japonica cultivar-group)] 465 3.43506e-45
CJ797298 whsct10d19 5' Root 227bp            
CJ797299 whsct10d21 5' Root 106bp            
CJ797300 whsct10d23 5' Root 686bp       annexin p33 [Zea mays] 229 7.9659e-18
CJ797301 whsct10f01 5' Root 682bp       Os06g0134000 [Oryza sativa (japonica cultivar-group)] 378 4.11305e-35
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