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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 22388
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whxb_10015_a01f 2012 5' Root 226bp Contig8149       RecName:Full=60SribosomalproteinL30 57 2.10572e-06
whxb_11015_a01f 2012 5' Root 490bp Contig5555       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 316 2.49658e-84
whxb_12015_a01f 2012 5' Root 459bp Contig7857       hypotheticalproteinSORBIDRAFT_04g035670[Sorghumbicolor] 133 2.94715e-29
whxb_14015_a01f 2012 5' Root 563bp Contig5320       Chain6,StructureOfSignalRecognitionParticleReceptor(Sr)InComplexWithSignalRecognitionParticle(Srp)AndRibosomeNascentChainComplex 248 8.64683e-64
whxb_15015_a01f 2012 5' Root 539bp Contig31935       PREDICTED:NADHdehydrogenase[ubiquinone]1betasubcomplexsubunit10-B-like[Brachypodiumdistachyon] 227 1.385e-57
whxb_16015_a01f 2012 5' Root 449bp Contig4381       PREDICTED:40SribosomalproteinS29-likeisoform1[Brachypodiumdistachyon] 131 1.13466e-28
whxb_17015_a01f 2012 5' Root 478bp Contig28712       predictedprotein[Hordeumvulgaresubsp.vulgare] 163 2.65936e-38
whxb_18015_a01f 2012 5' Root 538bp Contig818       predictedprotein[Hordeumvulgaresubsp.vulgare] 327 1.28435e-87
whxb_20015_a01f 2012 5' Root 455bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 223 2.17497e-56
whxb_2015_a01f 2012 5' Root 679bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 356 3.61915e-96
whxb_21015_a01f 2012 5' Root 610bp Contig5412       dehydroascorbatereductase[Triticumaestivum] 406 2.36065e-111
whxb_22015_a01f 2012 5' Root 629bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 391 8.54184e-107
whxb_24015_a01f 2012 5' Root 433bp Contig2244       PREDICTED:S-adenosylmethioninesynthase1-likeisoform1[Brachypodiumdistachyon] 72 6.19143e-11
whxb_25015_a01f 2012 5' Root 433bp Contig2244       PREDICTED:S-adenosylmethioninesynthase1-likeisoform1[Brachypodiumdistachyon] 72 6.19143e-11
whxb_26015_a01f 2012 5' Root 646bp       putativeelongationfactor1-alpha[Miscanthussinensis] 322 5.17288e-86
whxb_27015_a01f 2012 5' Root 443bp       YALI0E26257p[Yarrowialipolytica] 40 0.265691
whxb_28015_a01f 2012 5' Root 331bp Contig8666       PREDICTED:uncharacterizedproteinLOC100835943[Brachypodiumdistachyon] 60 2.44063e-07
whxb_29015_a01f 2012 5' Root 629bp Contig8940       pathogenesis-relatedprotein1-10[Triticumaestivum] 361 7.24789e-98
whxb_30015_a01f 2012 5' Root 440bp Contig13422       PREDICTED:6-phosphogluconatedehydrogenase,decarboxylating-likeisoform1[Brachypodiumdistachyon] 158 6.51317e-37
whxb_32015_a01f 2012 5' Root 548bp Contig8667       WRKYtranscriptionfactor[Triticumaestivum] 162 1.98229e-43
whxb_33015_a01f 2012 5' Root 631bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 393 1.72112e-107
whxb_34015_a01f 2012 5' Root 336bp Contig8668            
whxb_35015_a01f 2012 5' Root 580bp       hypotheticalproteinCHLREDRAFT_195287[Chlamydomonasreinhardtii] 37 3.2871
whxb_4015_a01f 2012 5' Root 663bp Contig3446       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 306 5.32348e-81
whxb_5015_a01f 2012 5' Root 70bp Contig9013            
whxb_6015_a01f 2012 5' Root 596bp       hypotheticalproteinSORBIDRAFT_08g003720[Sorghumbicolor] 317 1.36506e-84
whxb_7015_a01f 2012 5' Root 328bp       Os12g0159600[OryzasativaJaponicaGroup] 138 9.27964e-31
whxb_8015_a01f 2012 5' Root 553bp       calreticulin-likeprotein[Triticumaestivum] 400 9.66586e-110
whxb_9015_a01f 2012 5' Root 520bp Contig8149       RecName:Full=60SribosomalproteinL30 224 7.8922e-57
whxb_1015_a01r 2012 3' Root 557bp Contig26866       RecName:Full=Ubiquitin-40SribosomalproteinS27a;Contains:RecName:Full=Ubiquitin;Contains:RecName:Full=40SribosomalproteinS27a;Flags:Precursor 307 8.86121e-82
whxb_11015_a01r 2012 3' Root 609bp Contig30486       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 297 1.9878e-78
whxb_12015_a01r 2012 3' Root 433bp Contig7857       hypotheticalproteinSORBIDRAFT_04g035670[Sorghumbicolor] 164 1.20227e-38
whxb_13015_a01r 2012 3' Root 44bp            
whxb_14015_a01r 2012 3' Root 540bp Contig3192       Chain6,StructureOfSignalRecognitionParticleReceptor(Sr)InComplexWithSignalRecognitionParticle(Srp)AndRibosomeNascentChainComplex 248 7.58212e-64
whxb_15015_a01r 2012 3' Root 524bp Contig31935       PREDICTED:NADHdehydrogenase[ubiquinone]1betasubcomplexsubunit10-B-like[Brachypodiumdistachyon] 227 1.24072e-57
whxb_16015_a01r 2012 3' Root 418bp Contig4381       PREDICTED:40SribosomalproteinS29-likeisoform1[Brachypodiumdistachyon] 131 1.11517e-28
whxb_17015_a01r 2012 3' Root 461bp Contig28712       predictedprotein[Hordeumvulgaresubsp.vulgare] 187 1.00381e-45
whxb_18015_a01r 2012 3' Root 556bp Contig6771       predictedprotein[Hordeumvulgaresubsp.vulgare] 230 1.79794e-58
whxb_20015_a01r 2012 3' Root 428bp Contig30307       predictedprotein[Hordeumvulgaresubsp.vulgare] 257 1.36865e-66
whxb_2015_a01r 2012 3' Root 510bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 276 2.18704e-72
whxb_21015_a01r 2012 3' Root 671bp Contig5412       dehydroascorbatereductase[Triticumaestivum] 317 1.80096e-84
whxb_22015_a01r 2012 3' Root 632bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 290 2.66723e-76
whxb_24015_a01r 2012 3' Root 394bp Contig2244       PREDICTED:S-adenosylmethioninesynthase1-likeisoform1[Brachypodiumdistachyon] 94 1.51037e-17
whxb_25015_a01r 2012 3' Root 394bp Contig2244       PREDICTED:S-adenosylmethioninesynthase1-likeisoform1[Brachypodiumdistachyon] 94 1.51037e-17
whxb_26015_a01r 2012 3' Root 582bp Contig10692       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 310 1.54031e-82
whxb_27015_a01r 2012 3' Root 403bp       YALI0E26257p[Yarrowialipolytica] 40 0.263202
whxb_28015_a01r 2012 3' Root 287bp Contig8666       predictedprotein[Hordeumvulgaresubsp.vulgare] 84 1.23259e-14
whxb_29015_a01r 2012 3' Root 577bp Contig8940       pathogenesis-relatedprotein1-10[Triticumaestivum] 326 2.04235e-87
whxb_30015_a01r 2012 3' Root 31bp            
whxb_32015_a01r 2012 3' Root 513bp Contig8667       WRKYtranscriptionfactor[Triticumaestivum] 162 1.02198e-52
whxb_33015_a01r 2012 3' Root 676bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 122 1.13601e-25
whxb_34015_a01r 2012 3' Root 323bp Contig8668            
whxb_35015_a01r 2012 3' Root 55bp Contig10575            
whxb_36015_a01r 2012 3' Root 537bp       ribosomalPr117,partial[Triticumaestivum] 285 4.19618e-75
whxb_37015_a01r 2012 3' Root 675bp       RecName:Full=Acylcarrierprotein1,chloroplastic;Short=ACPI;Short=AcylcarrierproteinI;Flags:Precursor 251 1.60327e-64
whxb_38015_a01r 2012 3' Root 461bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 108 1.01082e-21
whxb_39015_a01r 2012 3' Root 612bp Contig7431       Chain4,StructureOfSignalRecognitionParticleReceptor(Sr)InComplexWithSignalRecognitionParticle(Srp)AndRibosomeNascentChainComplex 297 2.04626e-78
whxb_40015_a01r 2012 3' Root 757bp       hypotheticalproteinFraEuI1c_0961[Frankiasp.EuI1c] 39 1.62637
whxb_6015_a01r 2012 3' Root 455bp       hypotheticalproteinSORBIDRAFT_08g003720[Sorghumbicolor] 171 7.51002e-41
whxb_7015_a01r 2012 3' Root 33bp            
whxb_8015_a01r 2012 3' Root 466bp Contig29060       calreticulin-likeprotein[Triticumaestivum] 210 1.47868e-52
whxb_9015_a01r 2012 3' Root 402bp Contig8149       RecName:Full=60SribosomalproteinL30 224 7.53467e-57
whxb_10015_a02f 2012 5' Root 502bp       pollenallergenhomolog[Triticumaestivum] 334 8.65751e-90
whxb_11015_a02f 2012 5' Root 576bp Contig20815       mitochondrialprocessingpeptidasealpha-chainprecursor[Dactylisglomerata] 333 2.80156e-89
whxb_12015_a02f 2012 5' Root 519bp       hypotheticalproteinMYCGRDRAFT_117725[MycosphaerellagraminicolaIPO323] 42 0.0423331
whxb_14015_a02f 2012 5' Root 554bp Contig20383       PREDICTED:ketol-acidreductoisomerase,chloroplastic-like[Brachypodiumdistachyon] 361 5.07333e-98
whxb_15015_a02f 2012 5' Root 433bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 108 1.01818e-21
whxb_16015_a02f 2012 5' Root 103bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 56 2.66533e-06
whxb_17015_a02f 2012 5' Root 516bp Contig36858       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 2.61512e-68
whxb_18015_a02f 2012 5' Root 31bp            
whxb_19015_a02f 2012 5' Root 468bp Contig36558       predictedprotein[Hordeumvulgaresubsp.vulgare] 311 4.71282e-83
whxb_20015_a02f 2012 5' Root 540bp Contig8706       predictedprotein[Hordeumvulgaresubsp.vulgare] 284 1.24688e-74
whxb_2015_a02f 2012 5' Root 637bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 417 1.48526e-114
whxb_21015_a02f 2012 5' Root 528bp Contig9302       PREDICTED:40SribosomalproteinS27-like[Brachypodiumdistachyon] 184 1.26055e-44
whxb_22015_a02f 2012 5' Root 648bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 269 5.26189e-70
whxb_23015_a02f 2012 5' Root 505bp Contig9302       PREDICTED:40SribosomalproteinS27-like[Brachypodiumdistachyon] 184 1.13636e-44
whxb_24015_a02f 2012 5' Root 263bp            
whxb_25015_a02f 2012 5' Root 396bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 145 4.50281e-33
whxb_26015_a02f 2012 5' Root 536bp Contig9094       predictedprotein[Hordeumvulgaresubsp.vulgare] 183 2.93303e-44
whxb_28015_a02f 2012 5' Root 686bp       ATPsynthasebetasubunit[Triticumaestivum] 296 5.93393e-78
whxb_29015_a02f 2012 5' Root 209bp Contig1087       PREDICTED:arginine/serine-rich-splicingfactorRSP31-like[Brachypodiumdistachyon] 136 2.67232e-30
whxb_30015_a02f 2012 5' Root 552bp Contig30486       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 358 5.60922e-97
whxb_3015_a02f 2012 5' Root 636bp Contig29174       SGT1[Triticumaestivum] 414 9.62718e-114
whxb_31015_a02f 2012 5' Root 598bp Contig11535       PREDICTED:cellulosesynthase-likeproteinE2-like[Brachypodiumdistachyon] 334 1.40934e-89
whxb_32015_a02f 2012 5' Root 651bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 347 1.53913e-93
whxb_33015_a02f 2012 5' Root 627bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 401 1.06367e-109
whxb_4015_a02f 2012 5' Root 634bp Contig6671       RecName:Full=T-complexprotein1subunitepsilon;Short=TCP-1-epsilon;AltName:Full=CCT-epsilon;AltName:Full=TCP-K19 306 3.64447e-81
whxb_5015_a02f 2012 5' Root 219bp Contig6671            
whxb_6015_a02f 2012 5' Root 600bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 381 5.95593e-104
whxb_7015_a02f 2012 5' Root 503bp Contig8669       predictedprotein[Hordeumvulgaresubsp.vulgare] 84 1.56043e-14
whxb_8015_a02f 2012 5' Root 531bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.75488e-54
whxb_10015_a02r 2012 3' Root 420bp       pollenallergenhomolog[Triticumaestivum] 297 1.20857e-78
whxb_11015_a02r 2012 3' Root 611bp Contig20815       mitochondrialprocessingpeptidasealpha-chainprecursor[Dactylisglomerata] 139 5.38237e-31
whxb_12015_a02r 2012 3' Root 538bp       PREDICTED:hypotheticalproteinLOC100658043[Loxodontaafricana] 41 0.140766
whxb_14015_a02r 2012 3' Root 625bp Contig20383       predictedprotein[Hordeumvulgaresubsp.vulgare] 335 5.41407e-90
whxb_16015_a02r 2012 3' Root 131bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 41 0.117278
whxb_17015_a02r 2012 3' Root 498bp Contig36858       predictedprotein[Hordeumvulgaresubsp.vulgare] 268 5.88844e-70
whxb_18015_a02r 2012 3' Root 520bp Contig36858       predictedprotein[Hordeumvulgaresubsp.vulgare] 288 5.78508e-76
whxb_19015_a02r 2012 3' Root 606bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 352 5.20685e-95
whxb_20015_a02r 2012 3' Root 546bp Contig8706       predictedprotein[Hordeumvulgaresubsp.vulgare] 117 1.57032e-24
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