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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 16076
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whxa_10015_a01f 2012 5' Root 452bp Contig23977       glyceraldehyde-3-phosphatedehydrogenase[Triticummonococcum] 276 1.66485e-72
whxa_12015_a01f 2012 5' Root 459bp Contig9740       aquaporin[Hordeumvulgare] 175 6.73317e-42
whxa_13015_a01f 2012 5' Root 201bp       hypotheticalproteinCCM_09273[CordycepsmilitarisCM01] 31 0.635398
whxa_14015_a01f 2012 5' Root 328bp Contig6797       predictedprotein[Hordeumvulgaresubsp.vulgare] 219 2.42508e-55
whxa_16015_a01f 2012 5' Root 545bp Contig2824       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 215 4.23689e-54
whxa_17015_a01f 2012 5' Root 616bp       chloridechannelproteink,putative[ToxoplasmagondiiVEG] 59 7.28385e-07
whxa_18015_a01f 2012 5' Root 610bp Contig36543       predictedprotein[Hordeumvulgaresubsp.vulgare] 364 7.87674e-99
whxa_19015_a01f 2012 5' Root 570bp       alpha-tubulin[Alopecurusaequalis] 372 3.08054e-101
whxa_20015_a01f 2012 5' Root 566bp Contig36195       hypotheticalproteinSORBIDRAFT_05g027180[Sorghumbicolor] 379 2.53205e-103
whxa_2015_a01f 2012 5' Root 574bp Contig9138       aquaporinPIP1[Triticumaestivum] 324 7.62938e-87
whxa_21015_a01f 2012 5' Root 597bp       hypotheticalproteinOsI_30614[OryzasativaIndicaGroup] 307 1.84493e-81
whxa_22015_a01f 2012 5' Root 479bp Contig17303       cytochromereductase,partial[Triticumaestivum] 179 3.58591e-43
whxa_23015_a01f 2012 5' Root 567bp Contig12935       predictedprotein[Hordeumvulgaresubsp.vulgare] 338 8.4086e-91
whxa_25015_a01f 2012 5' Root 578bp Contig8249       PREDICTED:DNA(cytosine-5)-methyltransferase1B-like[Brachypodiumdistachyon] 170 2.44636e-40
whxa_26015_a01f 2012 5' Root 533bp Contig8249       PREDICTED:DNA(cytosine-5)-methyltransferase1B-like[Brachypodiumdistachyon] 158 5.79755e-37
whxa_27015_a01f 2012 5' Root 779bp Contig33529       predictedprotein[Hordeumvulgaresubsp.vulgare] 458 1.17593e-126
whxa_28015_a01f 2012 5' Root 750bp Contig28411       translationally-controlledtumorprotein[Triticumaestivum] 344 1.34951e-92
whxa_29015_a01f 2012 5' Root 422bp Contig2080       predictedprotein[Hordeumvulgaresubsp.vulgare] 150 2.37622e-34
whxa_7015_a01f 2012 5' Root 359bp       beta-glucosidase[Triticumaestivum] 162 3.49208e-38
whxa_8015_a01f 2012 5' Root 341bp Contig22089       putativepolyprotein[OryzasativaJaponicaGroup] 44 0.0137018
whxa_9015_a01f 2012 5' Root 168bp       PREDICTED:60SribosomalproteinL7-3-like[Brachypodiumdistachyon] 88 6.4273e-16
whxa_10015_a01r 2012 3' Root 615bp Contig23977       glyceraldehyde-3-phosphatedehydrogenase[Triticumaestivum] 319 5.02845e-85
whxa_13015_a01r 2012 3' Root 497bp Contig9740       aquaporin[Hordeumvulgare] 196 2.17737e-48
whxa_14015_a01r 2012 3' Root 724bp Contig35437       glyceraldehyde-3-phosphatedehydrogenase[Triticumaestivum] 373 2.49488e-101
whxa_16015_a01r 2012 3' Root 541bp Contig2824       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 6.78064e-60
whxa_17015_a01r 2012 3' Root 663bp       hypotheticalproteinOsJ_00371[OryzasativaJaponicaGroup] 114 2.27321e-23
whxa_19015_a01r 2012 3' Root 627bp Contig686       PREDICTED:tubulinalphachain-like[Brachypodiumdistachyon] 368 9.97875e-100
whxa_20015_a01r 2012 3' Root 615bp Contig9977       PREDICTED:ATP-citratesynthasealphachainprotein2-like[Brachypodiumdistachyon] 294 1.01555e-77
whxa_2015_a01r 2012 3' Root 606bp Contig9138       aquaporinPIP1[Triticumaestivum] 241 1.27541e-61
whxa_21015_a01r 2012 3' Root 598bp       hypotheticalproteinSORBIDRAFT_09g026180[Sorghumbicolor] 196 4.56471e-48
whxa_22015_a01r 2012 3' Root 417bp Contig17303       cytochromereductase,partial[Triticumaestivum] 183 1.89339e-44
whxa_23015_a01r 2012 3' Root 552bp Contig12935       predictedprotein[Hordeumvulgaresubsp.vulgare] 270 2.00895e-70
whxa_25015_a01r 2012 3' Root 521bp Contig8249       PREDICTED:DNA(cytosine-5)-methyltransferase1B-like[Brachypodiumdistachyon] 183 2.62101e-44
whxa_26015_a01r 2012 3' Root 56bp Contig8249       PREDICTED:DNA(cytosine-5)-methyltransferase1B-like[Brachypodiumdistachyon] 38 0.55373
whxa_27015_a01r 2012 3' Root 575bp Contig33529       predictedprotein[Hordeumvulgaresubsp.vulgare] 335 5.64495e-90
whxa_28015_a01r 2012 3' Root 588bp Contig28411       translationally-controlledtumorprotein[Triticumaestivum] 303 2.54111e-80
whxa_29015_a01r 2012 3' Root 252bp Contig2080       predictedprotein[Hordeumvulgaresubsp.vulgare] 44 0.0108495
whxa_3015_a01r 2012 3' Root 147bp       aquaporin[Hordeumvulgare] 86 4.24544e-15
whxa_7015_a01r 2012 3' Root 597bp Contig10043       beta-glucosidase[Triticumaestivum] 217 2.5109e-54
whxa_8015_a01r 2012 3' Root 292bp Contig22089       predictedprotein[LeptosphaeriamaculansJN3] 49 0.000334031
whxa_10015_a02f 2012 5' Root 437bp Contig12162       predictedprotein[Hordeumvulgaresubsp.vulgare] 215 5.88884e-54
whxa_1015_a02f 2012 5' Root 587bp       hypotheticalproteinOsJ_24443[OryzasativaJaponicaGroup] 213 2.648e-53
whxa_11015_a02f 2012 5' Root 391bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 242 2.6292e-62
whxa_14015_a02f 2012 5' Root 431bp       PREDICTED:uncharacterizedproteinLOC100830321[Brachypodiumdistachyon] 133 2.96817e-29
whxa_15015_a02f 2012 5' Root 462bp       PREDICTED:uncharacterizedproteinLOC100830321[Brachypodiumdistachyon] 133 2.93422e-29
whxa_16015_a02f 2012 5' Root 583bp Contig15858       PREDICTED:uncharacterizedproteinLOC100841437isoform1[Brachypodiumdistachyon] 166 3.65228e-39
whxa_17015_a02f 2012 5' Root 585bp       Os01g0946800[OryzasativaJaponicaGroup] 108 1.19971e-21
whxa_18015_a02f 2012 5' Root 591bp Contig23977       predictedprotein[Hordeumvulgaresubsp.vulgare] 379 3.70269e-103
whxa_20015_a02f 2012 5' Root 626bp Contig6540       Mitochondrialprotein,putative[Medicagotruncatula] 107 2.71284e-30
whxa_21015_a02f 2012 5' Root 52bp Contig9739            
whxa_22015_a02f 2012 5' Root 147bp       RecName:Full=HMG1/2-likeprotein 44 0.0185587
whxa_23015_a02f 2012 5' Root 331bp Contig34994       predictedprotein[Hordeumvulgaresubsp.vulgare] 67 1.52872e-09
whxa_24015_a02f 2012 5' Root 391bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 134 1.32236e-29
whxa_27015_a02f 2012 5' Root 674bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 340 2.62437e-91
whxa_28015_a02f 2012 5' Root 796bp            
whxa_29015_a02f 2012 5' Root 415bp Contig9913       hypotheticalprotein[Amblyommamaculatum] 238 4.95956e-61
whxa_4015_a02f 2012 5' Root 546bp       hypotheticalproteinSORBIDRAFT_01g033540[Sorghumbicolor] 158 8.02758e-37
whxa_5015_a02f 2012 5' Root 419bp Contig9662       PREDICTED:putativemitochondrial2-oxoglutarate/malatecarrierprotein-like[Brachypodiumdistachyon] 247 1.43427e-63
whxa_6015_a02f 2012 5' Root 446bp Contig5582       predictedprotein[Hordeumvulgaresubsp.vulgare] 251 5.78521e-65
whxa_7015_a02f 2012 5' Root 446bp Contig9547       predictedprotein[Hordeumvulgaresubsp.vulgare] 267 7.80083e-70
whxa_8015_a02f 2012 5' Root 398bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 257 8.09733e-67
whxa_9015_a02f 2012 5' Root 423bp Contig534       predictedprotein[Hordeumvulgaresubsp.vulgare] 277 7.55592e-73
whxa_10015_a02r 2012 3' Root 607bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 237 1.43118e-60
whxa_1015_a02r 2012 3' Root 597bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 305 5.34234e-81
whxa_11015_a02r 2012 3' Root 685bp Contig2410       predictedprotein[Hordeumvulgaresubsp.vulgare] 222 8.63945e-94
whxa_13015_a02r 2012 3' Root 54bp Contig9154       ChainM,LocalizationOfTheSmallSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 40 0.145719
whxa_14015_a02r 2012 3' Root 419bp       PREDICTED:uncharacterizedproteinLOC100830321[Brachypodiumdistachyon] 133 3.01851e-29
whxa_15015_a02r 2012 3' Root 428bp       PREDICTED:uncharacterizedproteinLOC100830321[Brachypodiumdistachyon] 133 2.98076e-29
whxa_16015_a02r 2012 3' Root 568bp       PREDICTED:uncharacterizedproteinLOC100841437isoform1[Brachypodiumdistachyon] 166 3.35292e-39
whxa_17015_a02r 2012 3' Root 467bp       hypotheticalproteinpah_c004o004[Parachlamydiaacanthamoebaestr.Hall'scoccus] 35 8.51409
whxa_18015_a02r 2012 3' Root 790bp Contig23977       glyceraldehyde-3-phosphatedehydrogenase[Triticumaestivum] 427 2.29634e-117
whxa_19015_a02r 2012 3' Root 191bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 53 2.32333e-05
whxa_20015_a02r 2012 3' Root 576bp Contig6540       Mitochondrialprotein,putative[Medicagotruncatula] 172 6.32868e-41
whxa_22015_a02r 2012 3' Root 72bp            
whxa_23015_a02r 2012 3' Root 311bp Contig34994       predictedprotein[Hordeumvulgaresubsp.vulgare] 83 3.48339e-14
whxa_24015_a02r 2012 3' Root 386bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 165 5.37787e-39
whxa_27015_a02r 2012 3' Root 581bp Contig14643       predictedprotein[Hordeumvulgaresubsp.vulgare] 282 3.43942e-74
whxa_28015_a02r 2012 3' Root 485bp       PREDICTED:probableproteinphosphatase2C34-like[Brachypodiumdistachyon] 66 4.52029e-09
whxa_29015_a02r 2012 3' Root 329bp Contig9913       unknown[Lotusjaponicus] 90 2.21066e-16
whxa_4015_a02r 2012 3' Root 536bp Contig9317       putativetransthyretin,havingalternativesplicingproducts[OryzasativaJaponicaGroup] 257 9.36982e-67
whxa_5015_a02r 2012 3' Root 591bp       PREDICTED:putativemitochondrial2-oxoglutarate/malatecarrierprotein-like[Brachypodiumdistachyon] 193 2.88145e-47
whxa_6015_a02r 2012 3' Root 615bp Contig10713       predictedprotein[Hordeumvulgaresubsp.vulgare] 348 7.85038e-94
whxa_7015_a02r 2012 3' Root 644bp Contig9547       PREDICTED:60SribosomalproteinL5-1-like[Brachypodiumdistachyon] 309 3.4264e-82
whxa_8015_a02r 2012 3' Root 596bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 312 5.73513e-83
whxa_9015_a02r 2012 3' Root 590bp Contig534       predictedprotein[Hordeumvulgaresubsp.vulgare] 303 2.5821e-80
whxa_10016_a03f 2012 5' Root 261bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 179 2.79291e-43
whxa_1016_a03f 2012 5' Root 578bp       PREDICTED:probableDNArepairproteinRAD23-likeisoform1[Brachypodiumdistachyon] 318 9.48708e-85
whxa_13016_a03f 2012 5' Root 302bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 165 7.04732e-39
whxa_15016_a03f 2012 5' Root 496bp Contig8250       RecName:Full=Alanineaminotransferase2;Short=ALAAT-2;AltName:Full=Glutamatepyruvatetransaminase2;Short=GPT;AltName:Full=Glutamic--alaninetransaminase2;AltName:Full=Glutamic--pyruvictransaminase2 178 6.13612e-43
whxa_16016_a03f 2012 5' Root 240bp       RecName:Full=Alanineaminotransferase2;Short=ALAAT-2;AltName:Full=Glutamatepyruvatetransaminase2;Short=GPT;AltName:Full=Glutamic--alaninetransaminase2;AltName:Full=Glutamic--pyruvictransaminase2 155 4.27712e-36
whxa_17016_a03f 2012 5' Root 573bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 373 1.83823e-101
whxa_18016_a03f 2012 5' Root 276bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 178 8.01242e-43
whxa_20016_a03f 2012 5' Root 441bp Contig27210       a-agglutininanchoragesubunit[SaccharomycescerevisiaeYJM789] 43 0.0240307
whxa_21016_a03f 2012 5' Root 548bp       PREDICTED:coatomersubunitdelta-1-like[Brachypodiumdistachyon] 248 6.01877e-64
whxa_22016_a03f 2012 5' Root 326bp Contig3762       ribosomalproteinS28e[CoccomyxasubellipsoideaC-169] 79 3.91686e-13
whxa_23016_a03f 2012 5' Root 268bp Contig5247            
whxa_24016_a03f 2012 5' Root 122bp Contig5247            
whxa_27016_a03f 2012 5' Root 734bp Contig34778       betatubulin5[Hordeumvulgaresubsp.vulgare] 348 8.92845e-94
whxa_28016_a03f 2012 5' Root 529bp Contig8242       predictedprotein[Hordeumvulgaresubsp.vulgare] 182 4.7901e-44
whxa_4016_a03f 2012 5' Root 620bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 413 2.01509e-113
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