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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 4897
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whsp_10015_a01f 2012 5' 563bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 219 5.61773e-55
whsp_11015_a01f 2012 5' 539bp       PREDICTED:uncharacterizedproteinAt3g03773-likeisoform1[Brachypodiumdistachyon] 264 1.33527e-68
whsp_12015_a01f 2012 5' 621bp       cathepsinL3,partial[Fasciolahepatica] 98 1.45481e-18
whsp_13015_a01f 2012 5' 563bp Contig6028       PREDICTED:40SribosomalproteinS24-2-like[Brachypodiumdistachyon] 264 1.16595e-68
whsp_16015_a01f 2012 5' 32bp            
whsp_17015_a01f 2012 5' 605bp Contig6129       PREDICTED:acyl-CoA-bindingprotein-like[Brachypodiumdistachyon] 161 1.67737e-37
whsp_18015_a01f 2012 5' 582bp Contig7088       plasmamembraneintrinsicprotein3[Triticumaestivum] 382 4.235e-104
whsp_19015_a01f 2012 5' 596bp Contig8685       alphatubulin-2A[Triticumaestivum] 354 1.31605e-95
whsp_2015_a01f 2012 5' 647bp       kdpEgeneproduct[EscherichiacoliP12b] 227 1.73405e-57
whsp_5015_a01f 2012 5' 69bp Contig30301       predictedprotein[Hordeumvulgaresubsp.vulgare] 44 0.00944371
whsp_6015_a01f 2012 5' 139bp       family57glycosyltransferase[Melampsoralarici-populina98AG31] 43 0.0305785
whsp_7015_a01f 2012 5' 597bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 342 3.94362e-92
whsp_8015_a01f 2012 5' 578bp Contig29320       predictedprotein[Hordeumvulgaresubsp.vulgare] 339 3.97666e-91
whsp_1015_a02f 2012 5' 566bp       PREDICTED:uncharacterizedproteinLOC100821932[Brachypodiumdistachyon] 170 2.33303e-40
whsp_11015_a02f 2012 5' 100bp Contig4289            
whsp_12015_a02f 2012 5' 573bp Contig36281       predictedprotein[Hordeumvulgaresubsp.vulgare] 345 4.17668e-93
whsp_16015_a02f 2012 5' 553bp Contig5729       PREDICTED:ubiquitin-conjugatingenzymeE228-like[Brachypodiumdistachyon] 308 6.65678e-82
whsp_18015_a02f 2012 5' 81bp Contig7751       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic;AltName:Full=60kDachaperoninsubunitalpha;AltName:Full=CPN-60alpha;Flags:Precursor 56 3.5538e-06
whsp_19015_a02f 2012 5' 48bp Contig2358       PREDICTED:60SribosomalproteinL35a-3-likeisoform1[Brachypodiumdistachyon] 34 6.66321
whsp_20015_a02f 2012 5' 619bp Contig5166       predictedprotein[Hordeumvulgaresubsp.vulgare] 292 5.18413e-77
whsp_4015_a02f 2012 5' 493bp Contig20373       predictedprotein[Hordeumvulgaresubsp.vulgare] 325 3.1222e-87
whsp_5015_a02f 2012 5' 47bp            
whsp_8015_a02f 2012 5' 539bp Contig18054       PREDICTED:uncharacterizedproteinLOC100845483[Brachypodiumdistachyon] 171 9.01902e-41
whsp_1016_a03f 2012 5' 489bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 149 3.09462e-34
whsp_11016_a03f 2012 5' 579bp Contig2932       plastidomega-3fattyaciddesaturase[Triticumaestivum] 412 2.87807e-113
whsp_14016_a03f 2012 5' 603bp       predictedprotein[MicromonaspusillaCCMP1545] 47 0.00347743
whsp_15016_a03f 2012 5' 481bp       Indolesynthase[Triticumaestivum] 311 7.89647e-83
whsp_18016_a03f 2012 5' 511bp       PREDICTED:histoneH4-like[Glycinemax] 209 3.26794e-52
whsp_3016_a03f 2012 5' 476bp Contig21376       predictedprotein[Hordeumvulgaresubsp.vulgare] 193 1.84568e-47
whsp_5016_a03f 2012 5' 653bp Contig17248       predictedprotein[Hordeumvulgaresubsp.vulgare] 302 4.34754e-80
whsp_7016_a03f 2012 5' 528bp       unknown[Triticumaestivum] 262 2.72678e-68
whsp_8016_a03f 2012 5' 657bp Contig4431       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 359 3.03338e-97
whsp_1016_a04f 2012 5' 568bp       PREDICTED:PHDfingerproteinAt1g33420-like[Brachypodiumdistachyon] 333 2.70495e-89
whsp_11016_a04f 2012 5' 45bp Contig2932       PREDICTED:temperature-sensitiveomega-3fattyaciddesaturase,chloroplastic-like[Brachypodiumdistachyon] 40 0.121432
whsp_12016_a04f 2012 5' 596bp Contig4167       predictedprotein[Hordeumvulgaresubsp.vulgare] 395 5.15124e-108
whsp_13016_a04f 2012 5' 533bp       RecName:Full=Protamine-2;AltName:Full=SpermhistoneP2;AltName:Full=SpermprotamineP2 39 0.392502
whsp_14016_a04f 2012 5' 554bp Contig1119       PREDICTED:tubulinbeta-3chain-like[Brachypodiumdistachyon] 364 5.99294e-99
whsp_15016_a04f 2012 5' 626bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 412 4.61386e-113
whsp_17016_a04f 2012 5' 564bp       PREDICTED:uncharacterizedproteinLOC100833171[Brachypodiumdistachyon] 179 4.9328e-43
whsp_18016_a04f 2012 5' 486bp Contig6308       PREDICTED:40SribosomalproteinS21-like[Brachypodiumdistachyon] 162 3.54857e-38
whsp_19016_a04f 2012 5' 630bp       PREDICTED:S-adenosylmethioninesynthase1-likeisoform1[Brachypodiumdistachyon] 395 4.52927e-108
whsp_20016_a04f 2012 5' 31bp            
whsp_5016_a04f 2012 5' 607bp       ribosomalproteinL16[Triticumaestivum] 277 1.60593e-72
whsp_6016_a04f 2012 5' 33bp            
whsp_8016_a04f 2012 5' 607bp Contig1979       cyclophilinA-1[Triticumaestivum] 361 8.58254e-98
whsp_9016_a04f 2012 5' 648bp Contig10295       predictedprotein[Hordeumvulgaresubsp.vulgare] 304 1.11619e-80
whsp_10031_a05f 2012 5' 409bp Contig8771       20Sproteasomebeta4subunit[Triticumaestivum] 268 4.53132e-70
whsp_11031_a05f 2012 5' 45bp Contig5332            
whsp_12031_a05f 2012 5' 510bp Contig7933       predictedprotein[Hordeumvulgaresubsp.vulgare] 324 7.0029e-87
whsp_16031_a05f 2012 5' 310bp       suc1-associatedneurotrophicfactortargetXSNT[Xenopuslaevis] 35 8.32959
whsp_18031_a05f 2012 5' 591bp       hypotheticalproteinVOLCADRAFT_89660[Volvoxcarterif.nagariensis] 42 0.107292
whsp_20031_a05f 2012 5' 561bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 366 2.13897e-99
whsp_3031_a05f 2012 5' 623bp       PREDICTED:translocaseofchloroplast34,chloroplastic-like[Brachypodiumdistachyon] 329 5.06742e-88
whsp_4031_a05f 2012 5' 580bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 384 8.25346e-105
whsp_5031_a05f 2012 5' 475bp Contig27885       polyubiquitincontaining7ubiquitinmonomers[Zeamays] 275 4.84504e-72
whsp_6031_a05f 2012 5' 133bp Contig21601       predictedprotein[Hordeumvulgaresubsp.vulgare] 91 7.54334e-17
whsp_8031_a05f 2012 5' 496bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.2765e-48
whsp_10031_a06f 2012 5' 534bp Contig6606       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic;AltName:Full=60kDachaperoninsubunitalpha;AltName:Full=CPN-60alpha;Flags:Precursor 190 2.34832e-46
whsp_11031_a06f 2012 5' 593bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 210 3.02215e-52
whsp_13031_a06f 2012 5' 550bp Contig26097       PREDICTED:polyadenylate-bindingprotein2-like[Brachypodiumdistachyon] 332 3.1693e-89
whsp_16031_a06f 2012 5' 247bp Contig1       PREDICTED:eukaryotictranslationinitiationfactor1A-likeisoform1[Brachypodiumdistachyon] 170 2.17661e-40
whsp_18031_a06f 2012 5' 589bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 120 4.04881e-25
whsp_20031_a06f 2012 5' 659bp Contig36202       predictedprotein[Hordeumvulgaresubsp.vulgare] 292 7.86131e-77
whsp_2031_a06f 2012 5' 596bp       catalaseisozyme,partial[Triticumaestivum] 369 3.95332e-100
whsp_4031_a06f 2012 5' 578bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 384 8.25346e-105
whsp_6031_a06f 2012 5' 565bp Contig9090       predictedprotein[Hordeumvulgaresubsp.vulgare] 284 8.48795e-75
whsp_7031_a06f 2012 5' 634bp Contig10620       predictedprotein[Hordeumvulgaresubsp.vulgare] 289 3.52995e-76
whsp_8031_a06f 2012 5' 675bp Contig2293       RecName:Full=60SribosomalproteinL24 325 6.68925e-87
whsp_9031_a06f 2012 5' 516bp Contig32954       PREDICTED:stomatin-likeprotein2-like[Brachypodiumdistachyon] 44 0.0111929
whsp_10032_a07f 2012 5' 84bp       PREDICTED:serine/threonine-proteinphosphatase2A65kDaregulatorysubunitAbetaisoform-like[Brachypodiumdistachyon] 51 8.7277e-05
whsp_12032_a07f 2012 5' 637bp Contig24253       predictedprotein[Hordeumvulgaresubsp.vulgare] 339 5.14041e-91
whsp_13032_a07f 2012 5' 406bp       Mu-likeprophageproteingp29[Methylophagasp.JAM7] 37 1.30626
whsp_15032_a07f 2012 5' 181bp Contig30565       PREDICTED:transcriptionelongationfactor1homologisoform1[Brachypodiumdistachyon] 98 6.11229e-19
whsp_16032_a07f 2012 5' 577bp Contig4250       predictedprotein[Hordeumvulgaresubsp.vulgare] 282 3.38209e-74
whsp_18032_a07f 2012 5' 341bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 51 0.000112088
whsp_19032_a07f 2012 5' 587bp Contig8781       predictedprotein[Hordeumvulgaresubsp.vulgare] 296 3.1063e-78
whsp_20032_a07f 2012 5' 560bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 164 1.23446e-38
whsp_2032_a07f 2012 5' 190bp       PREDICTED:uncharacterizedproteinLOC100838550[Brachypodiumdistachyon] 105 6.72858e-21
whsp_3032_a07f 2012 5' 553bp Contig20825       hypotheticalproteinOsJ_35848[OryzasativaJaponicaGroup] 104 1.45989e-20
whsp_4032_a07f 2012 5' 319bp Contig29018       hypotheticalproteinSORBIDRAFT_10g002620[Sorghumbicolor] 37 1.32163
whsp_5032_a07f 2012 5' 35bp            
whsp_6032_a07f 2012 5' 415bp Contig10914       PREDICTED:60SribosomalproteinL38-like[Brachypodiumdistachyon] 138 5.37052e-31
whsp_10032_a08f 2012 5' 551bp Contig167       GH17073[Drosophilagrimshawi] 41 0.194415
whsp_1032_a08f 2012 5' 560bp Contig3915       predictedprotein[Hordeumvulgaresubsp.vulgare] 292 3.92533e-77
whsp_11032_a08f 2012 5' 561bp Contig11925       predictedprotein[Hordeumvulgaresubsp.vulgare] 320 1.79047e-85
whsp_12032_a08f 2012 5' 599bp Contig7110       predictedprotein[Hordeumvulgaresubsp.vulgare] 299 5.00028e-79
whsp_13032_a08f 2012 5' 483bp       heatshockprotein90[Triticumaestivum] 320 9.921e-86
whsp_14032_a08f 2012 5' 529bp       PREDICTED:monoglyceridelipase-likeisoform1[Brachypodiumdistachyon] 247 1.58355e-63
whsp_15032_a08f 2012 5' 582bp Contig6056       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 349 3.90791e-94
whsp_16032_a08f 2012 5' 584bp       ATP/ADPcarrierprotein[Triticumturgidum] 380 1.6093e-103
whsp_18032_a08f 2012 5' 589bp       PREDICTED:uncharacterizedproteinLOC100844245[Brachypodiumdistachyon] 192 8.38374e-47
whsp_20032_a08f 2012 5' 600bp       smallRas-relatedGTP-bindingprotein[Triticumaestivum] 392 4.34001e-107
whsp_3032_a08f 2012 5' 624bp Contig1956       tubulinalpha-3chain[Populustrichocarpa] 363 3.16667e-98
whsp_4032_a08f 2012 5' 358bp Contig6196       Os07g0139600[OryzasativaJaponicaGroup] 59 4.17972e-07
whsp_5032_a08f 2012 5' 555bp       defensin[Triticumaestivum] 173 3.40653e-41
whsp_6032_a08f 2012 5' 444bp Contig10914       PREDICTED:60SribosomalproteinL38-like[Brachypodiumdistachyon] 140 1.43823e-31
whsp_7032_a08f 2012 5' 584bp Contig22437       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.03577e-98
whsp_8032_a08f 2012 5' 513bp Contig23768       cytosolicCu/Znsuperoxidedismutase[Triticumaestivum] 315 3.3187e-84
whsp_9032_a08f 2012 5' 449bp Contig19690       histoneH4[Zeamays] 207 9.53888e-52
whsp_10047_a09f 2012 5' 39bp            
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