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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 4629
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whsd_10015_a01r 2012 3' Shoot grown with dessication 312bp Contig5668       PREDICTED:proteinEI24homologisoform3[Brachypodiumdistachyon] 198 7.42969e-49
whsd_16015_a01r 2012 3' Shoot grown with dessication 633bp Contig9283       S-adenosylmethioninedecarboxylase[Triticumaestivum] 331 7.99363e-89
whsd_17015_a01r 2012 3' Shoot grown with dessication 608bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 203 3.90652e-50
whsd_18015_a01r 2012 3' Shoot grown with dessication 36bp            
whsd_20015_a01r 2012 3' Shoot grown with dessication 71bp Contig6520            
whsd_2015_a01r 2012 3' Shoot grown with dessication 625bp       celullosesynthase-likeDprotein[Gossypiumhirsutum] 38 1.78665
whsd_5015_a01r 2012 3' Shoot grown with dessication 638bp       unnamedproteinproduct[Tetraodonnigroviridis] 41 0.289352
whsd_8015_a01r 2012 3' Shoot grown with dessication 429bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 83 3.5225e-14
whsd_1015_a02r 2012 3' Shoot grown with dessication 56bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 42 0.0293613
whsd_11015_a02r 2012 3' Shoot grown with dessication 578bp       hypotheticalprotein[Cyprinidherpesvirus3] 41 4.15696e-05
whsd_12015_a02r 2012 3' Shoot grown with dessication 543bp Contig16298       predictedprotein[Hordeumvulgaresubsp.vulgare] 240 1.60629e-61
whsd_20015_a02r 2012 3' Shoot grown with dessication 643bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 386 2.84405e-105
whsd_3015_a02r 2012 3' Shoot grown with dessication 713bp       PREDICTED:uncharacterizedproteinLOC100829158[Brachypodiumdistachyon] 217 3.7893e-54
whsd_4015_a02r 2012 3' Shoot grown with dessication 601bp Contig21287       predictedprotein[Hordeumvulgaresubsp.vulgare] 266 3.59176e-69
whsd_5015_a02r 2012 3' Shoot grown with dessication 665bp Contig7370       PREDICTED:zincfingerCCCHdomain-containingprotein19-like[Brachypodiumdistachyon] 46 0.0100461
whsd_8015_a02r 2012 3' Shoot grown with dessication 614bp Contig10559       USPfamilyprotein[Triticumaestivum] 332 4.39493e-89
whsd_9015_a02r 2012 3' Shoot grown with dessication 627bp Contig12377       predictedprotein[Hordeumvulgaresubsp.vulgare] 404 9.62048e-111
whsd_1016_a03r 2012 3' Shoot grown with dessication 542bp Contig18716       putativerubiscosmallsubunit[Triticumdurum] 315 5.15575e-84
whsd_11016_a03r 2012 3' Shoot grown with dessication 629bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 194 1.53246e-47
whsd_13016_a03r 2012 3' Shoot grown with dessication 649bp Contig1239       putativegda-1[Triticumurartu] 190 3.068e-46
whsd_14016_a03r 2012 3' Shoot grown with dessication 555bp       PREDICTED:ubiquitinthioesteraseOTU1-likeisoform1[Brachypodiumdistachyon] 306 1.93683e-81
whsd_15016_a03r 2012 3' Shoot grown with dessication 512bp Contig11974       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 221 8.31033e-56
whsd_16016_a03r 2012 3' Shoot grown with dessication 602bp Contig10520       predictedprotein[Hordeumvulgaresubsp.vulgare] 280 1.86871e-73
whsd_17016_a03r 2012 3' Shoot grown with dessication 632bp Contig1852       alphatubulin-2A[Triticumaestivum] 346 4.0959e-93
whsd_19016_a03r 2012 3' Shoot grown with dessication 477bp Contig14426       WRKY40transcriptionfactor,partial[Triticumaestivum] 299 1.82864e-79
whsd_20016_a03r 2012 3' Shoot grown with dessication 596bp Contig25640       predictedprotein[Hordeumvulgaresubsp.vulgare] 339 2.56842e-91
whsd_2016_a03r 2012 3' Shoot grown with dessication 300bp Contig6460       phosphoethanolaminemethyltransferase[Triticumaestivum] 207 1.24273e-51
whsd_3016_a03r 2012 3' Shoot grown with dessication 32bp            
whsd_5016_a03r 2012 3' Shoot grown with dessication 533bp Contig6866       hypotheticalproteinSORBIDRAFT_08g022930[Sorghumbicolor] 193 1.62627e-47
whsd_7016_a03r 2012 3' Shoot grown with dessication 695bp Contig4368       PREDICTED:proteinBUD31homolog2-like[Brachypodiumdistachyon] 315 9.75994e-84
whsd_8016_a03r 2012 3' Shoot grown with dessication 392bp Contig20922       MultidrugresistanceproteinABCtransporterfamily[Medicagotruncatula] 156 3.23642e-36
whsd_12016_a04r 2012 3' Shoot grown with dessication 637bp Contig23482       predictedprotein[Hordeumvulgaresubsp.vulgare] 122 9.87594e-26
whsd_15016_a04r 2012 3' Shoot grown with dessication 544bp Contig8323       PREDICTED:abscisicstress-ripeningprotein3-like[Brachypodiumdistachyon] 184 1.36613e-44
whsd_16016_a04r 2012 3' Shoot grown with dessication 545bp Contig3183       predictedprotein[Hordeumvulgaresubsp.vulgare] 315 3.92899e-84
whsd_18016_a04r 2012 3' Shoot grown with dessication 622bp Contig6435       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 295 6.12383e-78
whsd_19016_a04r 2012 3' Shoot grown with dessication 591bp Contig2293       RecName:Full=60SribosomalproteinL24 304 1.51377e-80
whsd_20016_a04r 2012 3' Shoot grown with dessication 89bp Contig25640       predictedprotein[Hordeumvulgaresubsp.vulgare] 39 0.445611
whsd_2016_a04r 2012 3' Shoot grown with dessication 699bp Contig11220       predictedprotein[Hordeumvulgaresubsp.vulgare] 317 1.98726e-84
whsd_4016_a04r 2012 3' Shoot grown with dessication 540bp Contig5679       predictedprotein[Hordeumvulgaresubsp.vulgare] 252 4.10414e-65
whsd_5016_a04r 2012 3' Shoot grown with dessication 523bp Contig6866       hypotheticalproteinSORBIDRAFT_08g022930[Sorghumbicolor] 192 4.32025e-47
whsd_6016_a04r 2012 3' Shoot grown with dessication 401bp Contig6117       PREDICTED:uncharacterizedproteinLOC100842745[Brachypodiumdistachyon] 83 2.08433e-14
whsd_7016_a04r 2012 3' Shoot grown with dessication 385bp Contig16878       putativerubiscosmallsubunit[Triticumdurum] 210 1.45776e-52
whsd_8016_a04r 2012 3' Shoot grown with dessication 617bp Contig31471       predictedprotein[Hordeumvulgaresubsp.vulgare] 276 3.79123e-72
whsd_10031_a05r 2012 3' Shoot grown with dessication 107bp            
whsd_11031_a05r 2012 3' Shoot grown with dessication 291bp Contig13805       PREDICTED:uncharacterizedproteinLOC100845670[Brachypodiumdistachyon] 108 4.36557e-23
whsd_13031_a05r 2012 3' Shoot grown with dessication 377bp Contig2511       PREDICTED:LEC14Bprotein-like[Brachypodiumdistachyon] 110 2.07784e-22
whsd_16031_a05r 2012 3' Shoot grown with dessication 581bp Contig17555       predictedprotein[Hordeumvulgaresubsp.vulgare] 263 2.15931e-68
whsd_17031_a05r 2012 3' Shoot grown with dessication 582bp Contig6803       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 240 1.49885e-61
whsd_20031_a05r 2012 3' Shoot grown with dessication 400bp Contig34130       hypotheticalproteinPhum_PHUM515400[Pediculushumanuscorporis] 36 4.98412
whsd_3031_a05r 2012 3' Shoot grown with dessication 649bp Contig7565       lipidtransferproteinprecursor[Triticumaestivum] 228 1.34431e-57
whsd_6031_a05r 2012 3' Shoot grown with dessication 810bp Contig2463       proteinphosphatase2Astructuralsubunit[Triticumaestivum] 413 3.62358e-113
whsd_7031_a05r 2012 3' Shoot grown with dessication 745bp Contig5450       pre-mRNAprocessingfactor[Triticumaestivum] 327 2.18978e-87
whsd_10031_a06r 2012 3' Shoot grown with dessication 593bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 154 1.50685e-35
whsd_11031_a06r 2012 3' Shoot grown with dessication 601bp Contig25151       heatshockprotein90[Triticumaestivum] 311 7.5693e-83
whsd_13031_a06r 2012 3' Shoot grown with dessication 606bp Contig6846       PREDICTED:uncharacterizedproteinLOC100825330[Brachypodiumdistachyon] 268 9.74284e-70
whsd_16031_a06r 2012 3' Shoot grown with dessication 645bp       PREDICTED:ubiquitincarboxyl-terminalhydrolase5-like[Brachypodiumdistachyon] 155 8.26968e-36
whsd_17031_a06r 2012 3' Shoot grown with dessication 588bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 325 4.78123e-87
whsd_19031_a06r 2012 3' Shoot grown with dessication 621bp Contig2288       S-adenosylmethioninesynthetase2[Triticummonococcum] 225 6.04175e-57
whsd_2031_a06r 2012 3' Shoot grown with dessication 768bp Contig3134       PREDICTED:ATP-dependentzincmetalloproteaseFTSH2,chloroplastic-like[Brachypodiumdistachyon] 420 2.02895e-115
whsd_3031_a06r 2012 3' Shoot grown with dessication 775bp       PREDICTED:structuralmaintenanceofchromosomesprotein3-like[Brachypodiumdistachyon] 116 8.25411e-24
whsd_4031_a06r 2012 3' Shoot grown with dessication 633bp Contig11925       putativegda-1[Triticumurartu] 190 2.87625e-46
whsd_5031_a06r 2012 3' Shoot grown with dessication 646bp Contig18889       PREDICTED:uncharacterizedproteinLOC100825330[Brachypodiumdistachyon] 277 2.49238e-72
whsd_6031_a06r 2012 3' Shoot grown with dessication 746bp Contig5453       PREDICTED:E3ubiquitin-proteinligaseSINAT2-like[Brachypodiumdistachyon] 290 3.90951e-76
whsd_7031_a06r 2012 3' Shoot grown with dessication 621bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 309 5.42664e-82
whsd_8031_a06r 2012 3' Shoot grown with dessication 601bp Contig20941       predictedprotein[Hordeumvulgaresubsp.vulgare] 193 3.92371e-47
whsd_10032_a07r 2012 3' Shoot grown with dessication 609bp Contig5514       alleneoxidesynthase,partial[Triticumaestivum] 261 1.22653e-67
whsd_12032_a07r 2012 3' Shoot grown with dessication 639bp Contig14792       predictedprotein[Hordeumvulgaresubsp.vulgare] 305 6.29831e-81
whsd_2032_a07r 2012 3' Shoot grown with dessication 575bp Contig9608       vacuolarATPasesubunitG[Triticumaestivum] 209 4.67172e-52
whsd_3032_a07r 2012 3' Shoot grown with dessication 84bp       Elongationfactor1-alpha[Medicagotruncatula] 43 0.0236981
whsd_4032_a07r 2012 3' Shoot grown with dessication 594bp Contig20515       predictedprotein[Hordeumvulgaresubsp.vulgare] 281 8.30074e-74
whsd_5032_a07r 2012 3' Shoot grown with dessication 561bp Contig5381       predictedprotein[Hordeumvulgaresubsp.vulgare] 228 6.96107e-58
whsd_7032_a07r 2012 3' Shoot grown with dessication 761bp Contig23182       predictedprotein[Hordeumvulgaresubsp.vulgare] 437 2.06931e-120
whsd_9032_a07r 2012 3' Shoot grown with dessication 591bp Contig9751       PREDICTED:ABCtransporterFfamilymember1-like[Brachypodiumdistachyon] 306 2.33541e-81
whsd_10032_a08r 2012 3' Shoot grown with dessication 436bp Contig5514       alleneoxidesynthase,partial[Triticumaestivum] 194 8.27149e-48
whsd_12032_a08r 2012 3' Shoot grown with dessication 448bp Contig15633       hypotheticalprotein[Zeamays] 65 7.64626e-09
whsd_13032_a08r 2012 3' Shoot grown with dessication 553bp Contig5454       aestivumstearoyl-ACPdesaturase[Triticumaestivum] 175 6.60491e-42
whsd_15032_a08r 2012 3' Shoot grown with dessication 614bp Contig4778       PREDICTED:BI1-likeprotein-like[Brachypodiumdistachyon] 259 4.72837e-67
whsd_16032_a08r 2012 3' Shoot grown with dessication 624bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 295 6.20888e-78
whsd_19032_a08r 2012 3' Shoot grown with dessication 617bp       PREDICTED:universalstressproteinA-likeprotein-likeisoform1[Brachypodiumdistachyon] 250 2.90958e-64
whsd_20032_a08r 2012 3' Shoot grown with dessication 585bp Contig35049       PREDICTED:uncharacterizedproteinLOC100821847[Brachypodiumdistachyon] 286 2.42157e-75
whsd_2032_a08r 2012 3' Shoot grown with dessication 822bp       PREDICTED:uncharacterizedproteinLOC100831414[Brachypodiumdistachyon] 430 3.80748e-118
whsd_3032_a08r 2012 3' Shoot grown with dessication 31bp            
whsd_4032_a08r 2012 3' Shoot grown with dessication 174bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 109 2.66843e-22
whsd_5032_a08r 2012 3' Shoot grown with dessication 668bp Contig17802       predictedprotein[Hordeumvulgaresubsp.vulgare] 297 1.93795e-78
whsd_8032_a08r 2012 3' Shoot grown with dessication 472bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 243 2.04943e-62
whsd_9032_a08r 2012 3' Shoot grown with dessication 578bp Contig10665       cobalamin-independentmethioninesynthase[Triticummonococcum] 271 7.797e-71
whsd_10047_a09r 2012 3' Shoot grown with dessication 209bp       PREDICTED:proliferation-associatedprotein2G4-like[Brachypodiumdistachyon] 133 1.73215e-29
whsd_11047_a09r 2012 3' Shoot grown with dessication 650bp Contig13525       hypotheticalproteinOsI_18581[OryzasativaIndicaGroup] 291 1.68877e-76
whsd_17047_a09r 2012 3' Shoot grown with dessication 589bp Contig10946       PREDICTED:E3ubiquitin-proteinligaseUPL1-like[Brachypodiumdistachyon] 141 1.69712e-31
whsd_19047_a09r 2012 3' Shoot grown with dessication 592bp Contig10761       predictedprotein[Hordeumvulgaresubsp.vulgare] 241 1.22413e-61
whsd_20047_a09r 2012 3' Shoot grown with dessication 31bp            
whsd_2047_a09r 2012 3' Shoot grown with dessication 716bp Contig5690       predictedprotein[Hordeumvulgaresubsp.vulgare] 351 9.95545e-95
whsd_3047_a09r 2012 3' Shoot grown with dessication 719bp Contig5455       predictedprotein[Hordeumvulgaresubsp.vulgare] 274 2.03996e-71
whsd_5047_a09r 2012 3' Shoot grown with dessication 426bp            
whsd_7047_a09r 2012 3' Shoot grown with dessication 343bp       unnamedproteinproduct[Oikopleuradioica] 36 2.94628
whsd_8047_a09r 2012 3' Shoot grown with dessication 612bp       PREDICTED:uncharacterizedproteinLOC100829493[Brachypodiumdistachyon] 309 3.92736e-82
whsd_10047_a10r 2012 3' Shoot grown with dessication 640bp Contig8086       predictedprotein[Hordeumvulgaresubsp.vulgare] 289 3.5764e-76
whsd_13047_a10r 2012 3' Shoot grown with dessication 628bp Contig3829       predictedprotein[Hordeumvulgaresubsp.vulgare] 306 3.56563e-81
whsd_14047_a10r 2012 3' Shoot grown with dessication 93bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 39 0.340186
whsd_15047_a10r 2012 3' Shoot grown with dessication 549bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 260 1.99898e-67
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