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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 4453
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whv_1611015_a01f 2012 5' Shoot grown under cold condition for 16days 388bp       PREDICTED:proteinFLUORESCENTINBLUELIGHT,chloroplastic-like[Brachypodiumdistachyon] 246 2.39728e-63
whv_1612015_a01f 2012 5' Shoot grown under cold condition for 16days 690bp       PREDICTED:5-methyltetrahydropteroyltriglutamate--homocysteinemethyltransferase-like[Brachypodiumdistachyon] 269 7.85239e-70
whv_1614015_a01f 2012 5' Shoot grown under cold condition for 16days 719bp Contig36272       predictedprotein[Hordeumvulgaresubsp.vulgare] 338 8.80775e-91
whv_1616015_a01f 2012 5' Shoot grown under cold condition for 16days 368bp Contig32559       photosystemIIpolypeptide[Triticumaestivum] 140 1.83428e-31
whv_1617015_a01f 2012 5' Shoot grown under cold condition for 16days 581bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 187 1.96665e-45
whv_1619015_a01f 2012 5' Shoot grown under cold condition for 16days 657bp       OSIGBa0096P03.8[OryzasativaIndicaGroup] 282 4.76929e-74
whv_1620015_a01f 2012 5' Shoot grown under cold condition for 16days 524bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 280 1.23498e-73
whv_165015_a01f 2012 5' Shoot grown under cold condition for 16days 122bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 88 6.46445e-16
whv_166015_a01f 2012 5' Shoot grown under cold condition for 16days 650bp Contig13848       predictedprotein[Hordeumvulgaresubsp.vulgare] 417 1.56242e-114
whv_168015_a01f 2012 5' Shoot grown under cold condition for 16days 605bp Contig33519       chlorophylla/b-bindingproteinWCABprecursor[Triticumaestivum] 411 7.12558e-113
whv_161015_a02f 2012 5' Shoot grown under cold condition for 16days 707bp       adenosinediphosphateglucosepyrophosphatase[Triticumaestivum] 416 4.23372e-114
whv_1612015_a02f 2012 5' Shoot grown under cold condition for 16days 695bp Contig15107       hypotheticalproteinOsI_03457[OryzasativaIndicaGroup] 406 4.2042e-111
whv_1614015_a02f 2012 5' Shoot grown under cold condition for 16days 155bp            
whv_1616015_a02f 2012 5' Shoot grown under cold condition for 16days 554bp Contig17083       hypotheticalproteinOsI_08713[OryzasativaIndicaGroup] 300 1.38802e-79
whv_1617015_a02f 2012 5' Shoot grown under cold condition for 16days 628bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Hordeumchilense] 441 7.19764e-122
whv_1620015_a02f 2012 5' Shoot grown under cold condition for 16days 508bp Contig7252       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 183 2.51976e-44
whv_163015_a02f 2012 5' Shoot grown under cold condition for 16days 715bp Contig6416       PREDICTED:uncharacterizedproteinAt4g14100-like[Brachypodiumdistachyon] 361 1.64097e-97
whv_164015_a02f 2012 5' Shoot grown under cold condition for 16days 717bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 191 1.73899e-46
whv_166015_a02f 2012 5' Shoot grown under cold condition for 16days 65bp            
whv_161016_a03f 2012 5' Shoot grown under cold condition for 16days 646bp Contig6923       dehydrin[Triticumaestivum] 241 1.49664e-61
whv_1613016_a03f 2012 5' Shoot grown under cold condition for 16days 674bp Contig6499       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 354 1.34471e-95
whv_1616016_a03f 2012 5' Shoot grown under cold condition for 16days 113bp            
whv_1617016_a03f 2012 5' Shoot grown under cold condition for 16days 144bp            
whv_1618016_a03f 2012 5' Shoot grown under cold condition for 16days 587bp       PREDICTED:DUF21domain-containingproteinAt2g14520-like[Brachypodiumdistachyon] 354 9.61153e-96
whv_1619016_a03f 2012 5' Shoot grown under cold condition for 16days 401bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 273 1.4202e-71
whv_162016_a03f 2012 5' Shoot grown under cold condition for 16days 674bp       salttolerantprotein[Triticumaestivum] 301 1.35097e-79
whv_166016_a03f 2012 5' Shoot grown under cold condition for 16days 174bp       probableUDP-sugartransporterproteinSLC35A4[Clonorchissinensis] 35 6.41616
whv_167016_a03f 2012 5' Shoot grown under cold condition for 16days 778bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.94195e-98
whv_168016_a03f 2012 5' Shoot grown under cold condition for 16days 617bp Contig6840       ATPsynthasesubunit[Triticumaestivum] 388 8.94043e-106
whv_169016_a03f 2012 5' Shoot grown under cold condition for 16days 57bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 42 0.0293613
whv_1612016_a04f 2012 5' Shoot grown under cold condition for 16days 467bp Contig24198       predictedprotein[Hordeumvulgaresubsp.vulgare] 140 1.87923e-31
whv_1617016_a04f 2012 5' Shoot grown under cold condition for 16days 145bp            
whv_1619016_a04f 2012 5' Shoot grown under cold condition for 16days 650bp       RecName:Full=GlutathioneS-transferase1;AltName:Full=GSTclass-phi 396 2.18523e-108
whv_162016_a04f 2012 5' Shoot grown under cold condition for 16days 452bp Contig9176       PREDICTED:40SribosomalproteinS27-like[Brachypodiumdistachyon] 184 1.12452e-44
whv_163016_a04f 2012 5' Shoot grown under cold condition for 16days 599bp       dehydrin[Triticumdurum] 296 4.23299e-78
whv_164016_a04f 2012 5' Shoot grown under cold condition for 16days 401bp       PREDICTED:diseaseresistanceproteinRPM1-like[Brachypodiumdistachyon] 136 2.07469e-30
whv_166016_a04f 2012 5' Shoot grown under cold condition for 16days 714bp Contig6417       PREDICTED:3-hydroxybutyryl-CoAdehydratase-like[Brachypodiumdistachyon] 372 5.45008e-101
whv_167016_a04f 2012 5' Shoot grown under cold condition for 16days 593bp Contig6527       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 271 8.45776e-71
whv_168016_a04f 2012 5' Shoot grown under cold condition for 16days 685bp Contig5532       phosphoribulokinase[Triticumaestivum] 454 1.30367e-125
whv_169016_a04f 2012 5' Shoot grown under cold condition for 16days 472bp Contig24971       Os01g0630700[OryzasativaJaponicaGroup] 147 1.52369e-33
whv_1610031_a05f 2012 5' Shoot grown under cold condition for 16days 36bp            
whv_1612031_a05f 2012 5' Shoot grown under cold condition for 16days 628bp Contig6137       predictedprotein[Hordeumvulgaresubsp.vulgare] 386 2.74782e-105
whv_1613031_a05f 2012 5' Shoot grown under cold condition for 16days 83bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 57 2.07734e-06
whv_1618031_a05f 2012 5' Shoot grown under cold condition for 16days 566bp Contig1949       predictedprotein[Hordeumvulgaresubsp.vulgare] 334 1.21999e-89
whv_1619031_a05f 2012 5' Shoot grown under cold condition for 16days 666bp Contig11828       predictedprotein[Hordeumvulgaresubsp.vulgare] 425 4.66406e-117
whv_163031_a05f 2012 5' Shoot grown under cold condition for 16days 725bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 463 3.15724e-128
whv_164031_a05f 2012 5' Shoot grown under cold condition for 16days 772bp Contig29366       predictedprotein[Hordeumvulgaresubsp.vulgare] 504 1.82238e-140
whv_166031_a05f 2012 5' Shoot grown under cold condition for 16days 743bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 358 8.86978e-97
whv_167031_a05f 2012 5' Shoot grown under cold condition for 16days 719bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 361 1.26889e-97
whv_169031_a05f 2012 5' Shoot grown under cold condition for 16days 658bp Contig14137       PREDICTED:bidirectionalsugartransporterSWEET2b-like[Brachypodiumdistachyon] 403 3.16218e-110
whv_1611031_a06f 2012 5' Shoot grown under cold condition for 16days 727bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 519 2.84239e-145
whv_1612031_a06f 2012 5' Shoot grown under cold condition for 16days 632bp Contig1500       predictedprotein[Hordeumvulgaresubsp.vulgare] 409 3.01652e-112
whv_1613031_a06f 2012 5' Shoot grown under cold condition for 16days 728bp Contig17083       hypotheticalproteinOsI_08713[OryzasativaIndicaGroup] 414 1.69807e-113
whv_1614031_a06f 2012 5' Shoot grown under cold condition for 16days 701bp Contig33534       predictedprotein[Hordeumvulgaresubsp.vulgare] 362 5.4429e-98
whv_1619031_a06f 2012 5' Shoot grown under cold condition for 16days 704bp Contig27645       predictedprotein[Hordeumvulgaresubsp.vulgare] 213 4.12571e-53
whv_162031_a06f 2012 5' Shoot grown under cold condition for 16days 705bp Contig7086       RecName:Full=Phosphoribulokinase,chloroplastic;Short=PRK;Short=PRKase;AltName:Full=Phosphopentokinase;Flags:Precursor 476 3.44738e-132
whv_163031_a06f 2012 5' Shoot grown under cold condition for 16days 202bp       group3lateembryogenesisabundantprotein[Triticumaestivum] 107 1.74767e-21
whv_164031_a06f 2012 5' Shoot grown under cold condition for 16days 541bp Contig9624       60SribosomalproteinL5[Triticumaestivum] 210 1.75202e-52
whv_166031_a06f 2012 5' Shoot grown under cold condition for 16days 392bp Contig20093       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 262 4.18787e-68
whv_167031_a06f 2012 5' Shoot grown under cold condition for 16days 39bp            
whv_169031_a06f 2012 5' Shoot grown under cold condition for 16days 317bp Contig20704       hypotheticalproteinMTR_3g035650[Medicagotruncatula] 154 9.68838e-36
whv_161032_a07f 2012 5' Shoot grown under cold condition for 16days 677bp Contig17786       predictedprotein[Hordeumvulgaresubsp.vulgare] 306 3.25207e-81
whv_1617032_a07f 2012 5' Shoot grown under cold condition for 16days 626bp Contig1132       PREDICTED:40SribosomalproteinS14-like[Brachypodiumdistachyon] 268 8.23922e-70
whv_1618032_a07f 2012 5' Shoot grown under cold condition for 16days 631bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Hordeumchilense] 440 1.22185e-121
whv_163032_a07f 2012 5' Shoot grown under cold condition for 16days 762bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.79751e-98
whv_164032_a07f 2012 5' Shoot grown under cold condition for 16days 750bp Contig7123       predictedprotein[Hordeumvulgaresubsp.vulgare] 351 1.8999e-94
whv_165032_a07f 2012 5' Shoot grown under cold condition for 16days 46bp            
whv_166032_a07f 2012 5' Shoot grown under cold condition for 16days 143bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 84 9.13595e-15
whv_168032_a07f 2012 5' Shoot grown under cold condition for 16days 500bp Contig6725       predictedprotein[Hordeumvulgaresubsp.vulgare] 141 8.27414e-32
whv_1610032_a08f 2012 5' Shoot grown under cold condition for 16days 736bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 333 3.91815e-89
whv_161032_a08f 2012 5' Shoot grown under cold condition for 16days 661bp Contig17786       predictedprotein[Hordeumvulgaresubsp.vulgare] 306 4.07605e-81
whv_1612032_a08f 2012 5' Shoot grown under cold condition for 16days 645bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 329 4.23168e-88
whv_1616032_a08f 2012 5' Shoot grown under cold condition for 16days 537bp Contig5531       lipidtransferproteinprecursor[Triticumaestivum] 226 2.31323e-57
whv_1617032_a08f 2012 5' Shoot grown under cold condition for 16days 554bp Contig1132       PREDICTED:40SribosomalproteinS14-like[Brachypodiumdistachyon] 268 5.84516e-70
whv_1619032_a08f 2012 5' Shoot grown under cold condition for 16days 389bp Contig6144       PREDICTED:coiled-coildomain-containingprotein72-like[Brachypodiumdistachyon] 93 3.37837e-17
whv_163032_a08f 2012 5' Shoot grown under cold condition for 16days 708bp Contig6518       phosphoethanolaminemethyltransferase[Triticumaestivum] 480 1.39962e-133
whv_164032_a08f 2012 5' Shoot grown under cold condition for 16days 712bp Contig7123       predictedprotein[Hordeumvulgaresubsp.vulgare] 351 1.68133e-94
whv_165032_a08f 2012 5' Shoot grown under cold condition for 16days 690bp Contig32773       predictedprotein[Hordeumvulgaresubsp.vulgare] 158 1.95214e-36
whv_166032_a08f 2012 5' Shoot grown under cold condition for 16days 638bp Contig771       wali7,partial[Triticumaestivum] 376 2.90539e-102
whv_167032_a08f 2012 5' Shoot grown under cold condition for 16days 715bp       smoothelin,likeprotein[Mustelaputoriusfuro] 49 0.00104638
whv_168032_a08f 2012 5' Shoot grown under cold condition for 16days 638bp Contig35299       Cellwall-associatedhydrolase,partial[Medicagotruncatula] 276 3.33699e-82
whv_1610047_a09f 2012 5' Shoot grown under cold condition for 16days 706bp       ATPsynthasebetasubunit[Triticumaestivum] 396 4.53385e-108
whv_1614047_a09f 2012 5' Shoot grown under cold condition for 16days 723bp Contig7723       putativecarbonicanhydrase[Triticumturgidumsubsp.durumxSecalecereale] 481 8.49559e-134
whv_1617047_a09f 2012 5' Shoot grown under cold condition for 16days 646bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 2.92374e-97
whv_1620047_a09f 2012 5' Shoot grown under cold condition for 16days 635bp       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform1[Brachypodiumdistachyon] 289 6.02119e-76
whv_162047_a09f 2012 5' Shoot grown under cold condition for 16days 677bp Contig5795       predictedprotein[Hordeumvulgaresubsp.vulgare] 360 1.89772e-97
whv_164047_a09f 2012 5' Shoot grown under cold condition for 16days 168bp       PREDICTED:LOWQUALITYPROTEIN:eukaryotictranslationinitiationfactor2subunit3-like[Brachypodiumdistachyon] 103 3.29331e-20
whv_165047_a09f 2012 5' Shoot grown under cold condition for 16days 677bp Contig2567       cobalamin-independentmethioninesynthase[Triticummonococcum] 443 1.70451e-122
whv_166047_a09f 2012 5' Shoot grown under cold condition for 16days 713bp Contig21219       60SribosomalproteinL5[Triticumaestivum] 453 3.14157e-125
whv_168047_a09f 2012 5' Shoot grown under cold condition for 16days 349bp Contig20358       PREDICTED:50SribosomalproteinL6,chloroplastic-like[Brachypodiumdistachyon] 161 6.02615e-38
whv_169047_a09f 2012 5' Shoot grown under cold condition for 16days 651bp Contig4421       RecName:Full=Acylcarrierprotein3,chloroplastic;AltName:Full=AcylcarrierproteinIII;Short=ACPIII;Flags:Precursor 252 8.6934e-65
whv_1610047_a10f 2012 5' Shoot grown under cold condition for 16days 705bp Contig6418       ATPsynthasebetasubunit[Triticumaestivum] 396 4.48805e-108
whv_1616047_a10f 2012 5' Shoot grown under cold condition for 16days 615bp Contig18112       plasmamembraneH+-ATPase[Hordeumvulgaresubsp.vulgare] 151 1.81352e-34
whv_1620047_a10f 2012 5' Shoot grown under cold condition for 16days 268bp Contig16302       glyoxysomalmalatedehydrogenase[Triticumaestivum] 141 6.40851e-32
whv_162047_a10f 2012 5' Shoot grown under cold condition for 16days 682bp Contig5795       predictedprotein[Hordeumvulgaresubsp.vulgare] 360 1.91904e-97
whv_165047_a10f 2012 5' Shoot grown under cold condition for 16days 682bp Contig7591       PrecursorofCP29,corechlorophylla/bbinding(CAB)proteinofphotosystemII(PSII)[Hordeumvulgaresubsp.vulgare] 454 1.2895e-125
whv_166047_a10f 2012 5' Shoot grown under cold condition for 16days 779bp Contig12238       predictedprotein[Hordeumvulgaresubsp.vulgare] 462 8.14357e-128
whv_167047_a10f 2012 5' Shoot grown under cold condition for 16days 746bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.63382e-98
whv_168047_a10f 2012 5' Shoot grown under cold condition for 16days 696bp Contig17539       ribulose1,5biphosphatecarboxylase/oxygenase[TriticumaestivumxSecalecereale] 491 1.00419e-136
whv_1610048_a11f 2012 5' Shoot grown under cold condition for 16days 694bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.12513e-98
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