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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 11750
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
CJ773323 whatl10a01 5' Root 519bp       glyceraldehyde-3-phosphate dehydrogenase [Triticum aestivum] 981 1.37626e-104
CJ773324 whatl10a03 5' Root 379bp       Os02g0556400 [Oryza sativa (japonica cultivar-group)] 832 2.94934e-87
CJ773325 whatl10a05 5' Root 458bp       Os03g0322500 [Oryza sativa (japonica cultivar-group)] 643 1.33274e-65
CJ773326 whatl10a07 5' Root 324bp       predicted protein [Monosiga brevicollis MX1] 86 0.305342
CJ773327 whatl10a09 5' Root 375bp       hypothetical protein OsJ_022482 [Oryza sativa (japonica cultivar-group)] 546 4.11137e-54
CJ773328 whatl10a11 5' Root 467bp       Os01g0918300 [Oryza sativa (japonica cultivar-group)] 460 1.85739e-44
CJ773329 whatl10a13 5' Root 410bp       Os07g0498300 [Oryza sativa (japonica cultivar-group)] 390 1.71832e-36
CJ773330 whatl10a15 5' Root 380bp       growth regulating factor 1 [Oryza sativa (indica cultivar-group)] 433 4.59968e-41
CJ773331 whatl10a17 5' Root 338bp       Os07g0565000 [Oryza sativa (japonica cultivar-group)] 731 1.1892e-75
CJ773332 whatl10a21 5' Root 451bp       glyceraldehyde-3-phosphate dehydrogenase [Triticum aestivum] 1001 7.20038e-107
CJ773333 whatl10a23 5' Root 369bp       RecName: Full=Splicing factor U2af large subunit B; AltName: Full=U2 small nuclear ribonucleoprotein auxiliary factor large subunit B; Short=U2 snRNP auxiliary factor large subunit B; AltName: Full=U2 auxiliary factor 65 kDa subunit B 727 4.08308e-75
CJ773334 whatl10c01 5' Root 519bp       Os01g0750000 [Oryza sativa (japonica cultivar-group)] 886 1.3756e-93
CJ773335 whatl10c03 5' Root 437bp       Os08g0420700 [Oryza sativa (japonica cultivar-group)] 425 3.80024e-40
CJ773336 whatl10c05 5' Root 397bp       Os06g0342200 [Oryza sativa (japonica cultivar-group)] 568 1.0052e-56
CJ773337 whatl10c07 5' Root 430bp       unknown [Zea mays] 339 1.50888e-30
CJ773338 whatl10c09 5' Root 433bp       Os12g0601200 [Oryza sativa (japonica cultivar-group)] 843 1.72652e-88
CJ773339 whatl10c11 5' Root 467bp       Chain 4, Structure Of Signal Recognition Particle Receptor (Sr) In Complex With Signal Recognition Particle (Srp) And Ribosome Nascent Chain Complex 517 7.07447e-51
CJ773340 whatl10c17 5' Root 436bp       unknown [Zea mays] 565 2.02193e-56
CJ773341 whatl10c19 5' Root 191bp       hypothetical protein AaeL_AAEL003348 [Aedes aegypti] 82 1.71726
CJ773342 whatl10c21 5' Root 452bp       hypothetical protein OsJ_028841 [Oryza sativa (japonica cultivar-group)] 748 1.51237e-77
CJ773343 whatl10c23 5' Root 422bp       Tubulin beta chain (Beta-tubulin) 1053 5.9393e-113
CJ773344 whatl10e01 5' Root 395bp       Os05g0501300 [Oryza sativa (japonica cultivar-group)] 885 2.03387e-93
CJ773345 whatl10e05 5' Root 549bp       hypothetical protein OsJ_016448 [Oryza sativa (japonica cultivar-group)] 951 4.87438e-101
CJ773346 whatl10e07 5' Root 464bp       Os07g0110300 [Oryza sativa (japonica cultivar-group)] 790 2.16978e-82
CJ773347 whatl10e11 5' Root 442bp       RNA-binding protein [Triticum aestivum] 107 0.00229743
CJ773348 whatl10e15 5' Root 484bp       unknown [Zea mays] 542 1.20628e-53
CJ773349 whatl10e17 5' Root 470bp       unknown [Zea mays] 620 7.96523e-63
CJ773350 whatl10e19 5' Root 497bp       hypothetical protein OsI_006148 [Oryza sativa (indica cultivar-group)] 116 0.000288726
CJ773351 whatl10e21 5' Root 379bp       glutathione-S-transferase Cla47 [Triticum aestivum] 1021 3.16544e-109
CJ773352 whatl10e23 5' Root 379bp       Os11g0634500 [Oryza sativa (japonica cultivar-group)] 321 1.68473e-28
CJ773353 whatl10g01 5' Root 431bp       unknown [Zea mays] 339 1.39362e-30
CJ773354 whatl10g03 5' Root 455bp       hypothetical protein OsJ_025807 [Oryza sativa (japonica cultivar-group)] 761 4.94452e-79
CJ773355 whatl10g07 5' Root 490bp       unknown [Zea mays] 1002 6.44774e-107
CJ773356 whatl10g09 5' Root 508bp       5,10-methylene-tetrahydrofolate reductase [Triticum monococcum] 1259 9.4756e-137
CJ773357 whatl10g11 5' Root 591bp       unknown [Zea mays] 541 9.58486e-54
CJ773358 whatl10g13 5' Root 589bp       RecName: Full=Histone H3.2 630 4.64982e-64
CJ773359 whatl10g21 5' Root 451bp       mitochondrial L2 ribosomal protein [Triticum aestivum] 746 2.4018e-77
CJ773360 whatl10g23 5' Root 426bp       CBL-interacting protein kinase [Hordeum brevisubulatum] 851 8.79897e-90
CJ773361 whatl10i03 5' Root 485bp       HGA1 [Hordeum vulgare] 989 1.59616e-105
CJ773362 whatl10i05 5' Root 482bp       hypothetical protein MAV_1831 [Mycobacterium avium 104] 73 9.58533
CJ773363 whatl10i07 5' Root 448bp       Putative expansin-A30 precursor (OsEXPA30) (Alpha-expansin-30) (OsEXP30) (OsaEXPa1.32) 867 2.68087e-91
CJ773364 whatl10i09 5' Root 501bp            
CJ773365 whatl10i11 5' Root 445bp       unknown [Zea mays] 926 2.99875e-98
CJ773366 whatl10i13 5' Root 547bp       unknown [Zea mays] 617 1.98959e-62
CJ773367 whatl10i15 5' Root 369bp       D-type cyclin [Zea mays] 125 2.98349e-05
CJ773368 whatl10i17 5' Root 466bp       Os01g0641700 [Oryza sativa (japonica cultivar-group)] 82 0.866902
CJ773369 whatl10i19 5' Root 368bp       unknown [Zea mays] 538 3.188e-53
CJ773370 whatl10i21 5' Root 404bp       hypothetical protein OsJ_028684 [Oryza sativa (japonica cultivar-group)] 181 2.91682e-12
CJ773371 whatl10i23 5' Root 453bp       unknown [Zea mays] 835 1.09042e-87
CJ773372 whatl10k01 5' Root 476bp       Protein H2A.5 (wcH2A-2) 466 6.988e-45
CJ773373 whatl10k03 5' Root 616bp       Os08g0525000 [Oryza sativa (japonica cultivar-group)] 934 4.01951e-99
CJ773374 whatl10k05 5' Root 590bp       hypothetical protein OsI_013542 [Oryza sativa (indica cultivar-group)] 888 8.36885e-94
CJ773375 whatl10k07 5' Root 517bp       hypothetical protein OsI_019272 [Oryza sativa (indica cultivar-group)] 895 1.26765e-94
CJ773376 whatl10k11 5' Root 421bp       predicted protein [Monosiga brevicollis MX1] 73 9.78074
CJ773377 whatl10k13 5' Root 498bp       OSJNBb0013O03.4 [Oryza sativa (japonica cultivar-group)] 228 2.9223e-17
CJ773378 whatl10k15 5' Root 489bp       hypothetical protein OsI_036973 [Oryza sativa (indica cultivar-group)] 113 0.00022641
CJ773379 whatl10k21 5' Root 455bp       14-3-3 protein [Triticum aestivum] 734 5.44814e-76
CJ773380 whatl10k23 5' Root 334bp       hypothetical protein OsI_001771 [Oryza sativa (indica cultivar-group)] 398 2.0001e-37
CJ773381 whatl10m01 5' Root 476bp       unknown [Zea mays] 732 9.01151e-76
CJ773382 whatl10m03 5' Root 488bp       predicted protein [Ajellomyces capsulatus NAm1] 89 0.214305
CJ773383 whatl10m07 5' Root 402bp       acidic ribosomal protein P2 [Triticum aestivum] 312 4.67676e-27
CJ773384 whatl10m09 5' Root 418bp       hypothetical protein OsI_017718 [Oryza sativa (indica cultivar-group)] 149 1.50546e-08
CJ773385 whatl10m11 5' Root 491bp       PREDICTED: similar to germinal histone H4 gene [Canis familiaris] 426 1.29012e-40
CJ773386 whatl10m13 5' Root 422bp       ascorbate peroxidase [Hordeum vulgare subsp. vulgare] 1015 1.80533e-108
CJ773387 whatl10m15 5' Root 334bp       immature spike ubiquitin-conjugating enzyme 2 [Triticum aestivum] 740 9.24617e-77
CJ773388 whatl10m17 5' Root 419bp       Os04g0612600 [Oryza sativa (japonica cultivar-group)] 877 1.65004e-92
CJ773389 whatl10m19 5' Root 375bp       calreticulin-like protein [Triticum aestivum] 602 1.40166e-60
CJ773390 whatl10m21 5' Root 502bp       Os02g0284600 [Oryza sativa (japonica cultivar-group)] 584 1.0583e-58
CJ773391 whatl10m23 5' Root 472bp       hypothetical protein OsI_004139 [Oryza sativa (indica cultivar-group)] 803 5.161e-84
CJ773392 whatl10o01 5' Root 493bp       unknown [Zea mays] 560 9.78574e-56
CJ773393 whatl10o03 5' Root 401bp       unknown [Zea mays] 201 1.38731e-14
CJ773394 whatl10o07 5' Root 381bp       hypothetical protein OsI_016405 [Oryza sativa (indica cultivar-group)] 186 7.67585e-13
CJ773395 whatl10o09 5' Root 389bp       hypothetical protein OsI_001348 [Oryza sativa (indica cultivar-group)] 732 1.10253e-75
CJ773396 whatl10o11 5' Root 443bp       hypothetical protein OsI_025983 [Oryza sativa (indica cultivar-group)] 801 9.83351e-84
CJ773397 whatl10o13 5' Root 460bp       hypothetical protein OsI_027109 [Oryza sativa (indica cultivar-group)] 369 1.38658e-33
CJ773398 whatl10o15 5' Root 424bp       unknown [Zea mays] 596 6.79205e-60
CJ773399 whatl10o21 5' Root 459bp            
CJ773400 whatl10o23 5' Root 398bp            
CJ773401 whatl10b03 5' Root 322bp       hypothetical protein OsI_022953 [Oryza sativa (indica cultivar-group)] 825 1.8131e-86
CJ773402 whatl10b05 5' Root 432bp       acidic ribosomal protein P2 [Triticum aestivum] 312 2.5983e-27
CJ773403 whatl10b07 5' Root 341bp       hypothetical protein OsJ_029688 [Oryza sativa (japonica cultivar-group)] 489 9.73865e-48
CJ773404 whatl10b13 5' Root 195bp       putative senescence-associated protein [Trichosanthes dioica] 135 6.35303e-07
CJ773405 whatl10b15 5' Root 349bp       mitochondrial 2-oxoglutarate/malate translocator [Saccharum officinarum] 837 7.61063e-88
CJ773406 whatl10b21 5' Root 415bp       Os05g0160200 [Oryza sativa (japonica cultivar-group)] 630 5.38929e-64
CJ773407 whatl10b23 5' Root 399bp       hypothetical protein OsJ_004520 [Oryza sativa (japonica cultivar-group)] 326 1.29824e-28
CJ773408 whatl10d01 5' Root 521bp       unknown [Zea mays] 683 4.85071e-70
CJ773409 whatl10d05 5' Root 407bp       nucleoside diphosphate kinase [Lolium perenne] 750 6.48032e-78
CJ773410 whatl10d07 5' Root 411bp       unknown [Zea mays] 632 3.62589e-64
CJ773411 whatl10d09 5' Root 238bp            
CJ773412 whatl10d11 5' Root 198bp       beta-D-glucan exohydrolase, isoenzyme ExoII 639 2.58149e-65
CJ773413 whatl10d13 5' Root 425bp       Nitrate reductase [NADH] (NR) 667 3.57281e-68
CJ773414 whatl10d15 5' Root 414bp       unknown [Zea mays] 607 3.47242e-61
CJ773415 whatl10d19 5' Root 467bp       unknown [Zea mays] 997 2.09499e-106
CJ773416 whatl10d21 5' Root 473bp       growth regulating factor 1 [Oryza sativa (indica cultivar-group)] 424 5.81205e-40
CJ773417 whatl10d23 5' Root 413bp       Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 1024 1.70999e-109
CJ773418 whatl10f03 5' Root 514bp       ribosomal protein L15 [Homo sapiens] 856 4.72792e-90
CJ773419 whatl10f09 5' Root 421bp       PREDICTED: similar to histone 1, H2ai (predicted) [Canis familiaris] 443 1.19711e-42
CJ773420 whatl10f13 5' Root 498bp       hypothetical protein OsI_030292 [Oryza sativa (indica cultivar-group)] 890 5.63812e-94
CJ773421 whatl10f17 5' Root 539bp       Elongation factor 1-alpha (EF-1-alpha) 905 9.91677e-96
CJ773422 whatl10f19 5' Root 418bp            
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