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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 9938
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whei_1015_a01f 2012 5' Dormant seed with water absorption after breaking 253bp       LOC568678protein[Daniorerio] 39 0.595333
whei_12015_a01f 2012 5' Dormant seed with water absorption after breaking 326bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 218 7.0559e-55
whei_13015_a01f 2012 5' Dormant seed with water absorption after breaking 494bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 309 3.0241e-82
whei_14015_a01f 2012 5' Dormant seed with water absorption after breaking 484bp       PREDICTED:proteinFAR1-RELATEDSEQUENCE6-like[Brachypodiumdistachyon] 44 0.0137232
whei_15015_a01f 2012 5' Dormant seed with water absorption after breaking 466bp Contig10840       glutathioneS-transferase[Triticumaestivum] 298 4.14691e-79
whei_19015_a01f 2012 5' Dormant seed with water absorption after breaking 484bp       hypotheticalprotein[Triticumaestivum] 309 3.06574e-82
whei_20015_a01f 2012 5' Dormant seed with water absorption after breaking 53bp            
whei_2015_a01f 2012 5' Dormant seed with water absorption after breaking 333bp       RNA-bindingprotein[Synechococcussp.RCC307] 63 2.19913e-08
whei_3015_a01f 2012 5' Dormant seed with water absorption after breaking 455bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 9.78567e-49
whei_5015_a01f 2012 5' Dormant seed with water absorption after breaking 420bp       hypotheticalproteinBra471DRAFT_04713[Bradyrhizobiumsp.WSM471] 50 0.00019702
whei_6015_a01f 2012 5' Dormant seed with water absorption after breaking 246bp Contig1071       predictedprotein[MicromonaspusillaCCMP1545] 88 6.37718e-16
whei_9015_a01f 2012 5' Dormant seed with water absorption after breaking 400bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 3.28747e-68
whei_1015_a01r 2012 3' Dormant seed with water absorption after breaking 634bp Contig1036       FlagellarRadialspokeprotein,putative[Pediculushumanuscorporis] 44 0.019778
whei_12015_a01r 2012 3' Dormant seed with water absorption after breaking 579bp       hypotheticalproteinSORBIDRAFT_01g030080[Sorghumbicolor] 140 2.07578e-31
whei_13015_a01r 2012 3' Dormant seed with water absorption after breaking 32bp            
whei_14015_a01r 2012 3' Dormant seed with water absorption after breaking 450bp       PREDICTED:proteinFAR1-RELATEDSEQUENCE6-like[Brachypodiumdistachyon] 44 0.0139671
whei_15015_a01r 2012 3' Dormant seed with water absorption after breaking 617bp Contig10840       glutathioneS-transferase[Triticumaestivum] 323 2.7044e-86
whei_18015_a01r 2012 3' Dormant seed with water absorption after breaking 38bp            
whei_19015_a01r 2012 3' Dormant seed with water absorption after breaking 622bp       hypotheticalprotein[Triticumaestivum] 336 3.17403e-90
whei_20015_a01r 2012 3' Dormant seed with water absorption after breaking 276bp       hypotheticalproteinEQVG_00108[Emilianiahuxleyivirus207] 45 0.00620645
whei_2015_a01r 2012 3' Dormant seed with water absorption after breaking 570bp       HeterogeneousnuclearribonucleoproteinA0[Salmosalar] 74 1.3277e-11
whei_3015_a01r 2012 3' Dormant seed with water absorption after breaking 526bp Contig26260       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.07726e-48
whei_5015_a01r 2012 3' Dormant seed with water absorption after breaking 39bp            
whei_6015_a01r 2012 3' Dormant seed with water absorption after breaking 215bp Contig1071       PREDICTED:uncharacterizedproteinLOC100803147[Glycinemax] 102 5.54806e-20
whei_8015_a01r 2012 3' Dormant seed with water absorption after breaking 72bp Contig29298       unknown[Medicagotruncatula] 46 0.00259815
whei_9015_a01r 2012 3' Dormant seed with water absorption after breaking 545bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 296 3.22158e-78
whei_10015_a02f 2012 5' Dormant seed with water absorption after breaking 442bp       Af10-protein[Avenafatua] 226 1.94746e-57
whei_1015_a02f 2012 5' Dormant seed with water absorption after breaking 584bp       relatedtocarbonrepressorprotein1(N-terminalfragment),partial[Ustilagohordei] 43 0.000154924
whei_12015_a02f 2012 5' Dormant seed with water absorption after breaking 350bp       11-beta-hydroxysteroiddehydrogenase-likeprotein[Triticumaestivum] 203 1.80603e-50
whei_14015_a02f 2012 5' Dormant seed with water absorption after breaking 437bp Contig2337       predictedprotein[Hordeumvulgaresubsp.vulgare] 177 1.7772e-42
whei_18015_a02f 2012 5' Dormant seed with water absorption after breaking 377bp Contig1060       ES1A[Hordeumvulgare] 44 0.0182874
whei_20015_a02f 2012 5' Dormant seed with water absorption after breaking 170bp       conservedexportedhypotheticalprotein[PhaeospirillummolischianumDSM120] 41 0.153203
whei_2015_a02f 2012 5' Dormant seed with water absorption after breaking 386bp Contig1779       PREDICTED:zincfingerCCCHdomain-containingprotein49-like[Brachypodiumdistachyon] 269 2.02472e-70
whei_3015_a02f 2012 5' Dormant seed with water absorption after breaking 419bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 257 1.38599e-66
whei_4015_a02f 2012 5' Dormant seed with water absorption after breaking 318bp Contig28195       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.21709e-54
whei_6015_a02f 2012 5' Dormant seed with water absorption after breaking 504bp       uncharacterizedproteinLOC100381827[Zeamays] 40 0.202926
whei_7015_a02f 2012 5' Dormant seed with water absorption after breaking 408bp Contig4519       predictedprotein[Hordeumvulgaresubsp.vulgare] 156 1.92153e-36
whei_8015_a02f 2012 5' Dormant seed with water absorption after breaking 379bp       PREDICTED:probableS-acyltransferaseAt3g26935-like[Brachypodiumdistachyon] 120 2.62239e-25
whei_9015_a02f 2012 5' Dormant seed with water absorption after breaking 401bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 176 2.36276e-42
whei_10015_a02r 2012 3' Dormant seed with water absorption after breaking 586bp Contig4917       PREDICTED:clathrininteractorEPSIN1-like[Brachypodiumdistachyon] 185 5.91282e-45
whei_1015_a02r 2012 3' Dormant seed with water absorption after breaking 569bp       preproMP73[Cucurbitamaxima] 51 0.000157201
whei_12015_a02r 2012 3' Dormant seed with water absorption after breaking 619bp       11-beta-hydroxysteroiddehydrogenase-likeprotein[Triticumaestivum] 316 1.5282e-84
whei_14015_a02r 2012 3' Dormant seed with water absorption after breaking 584bp Contig5127       predictedprotein[Hordeumvulgaresubsp.vulgare] 255 5.97838e-66
whei_15015_a02r 2012 3' Dormant seed with water absorption after breaking 123bp       glutathioneS-transferase[Triticumaestivum] 79 3.00285e-13
whei_18015_a02r 2012 3' Dormant seed with water absorption after breaking 329bp Contig1060       ES1A[Hordeumvulgare] 44 0.0181684
whei_20015_a02r 2012 3' Dormant seed with water absorption after breaking 607bp       PREDICTED:serine/argininerepetitivematrix1isoform2[Oryctolaguscuniculus] 38 0.0171897
whei_2015_a02r 2012 3' Dormant seed with water absorption after breaking 159bp       PREDICTED:zincfingerCCCHdomain-containingprotein49-like[Brachypodiumdistachyon] 91 7.66468e-17
whei_3015_a02r 2012 3' Dormant seed with water absorption after breaking 117bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 82 4.66091e-14
whei_4015_a02r 2012 3' Dormant seed with water absorption after breaking 658bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 213 3.51112e-53
whei_6015_a02r 2012 3' Dormant seed with water absorption after breaking 604bp Contig19209       putativesheathprotein[Pseudomonassavastanoipv.savastanoiNCPPB3335] 41 0.193704
whei_7015_a02r 2012 3' Dormant seed with water absorption after breaking 445bp Contig4519       predictedprotein[Hordeumvulgaresubsp.vulgare] 180 2.1392e-43
whei_8015_a02r 2012 3' Dormant seed with water absorption after breaking 578bp       PREDICTED:probableS-acyltransferaseAt3g26935-like[Brachypodiumdistachyon] 150 2.0059e-34
whei_9015_a02r 2012 3' Dormant seed with water absorption after breaking 64bp            
whei_10016_a03f 2012 5' Dormant seed with water absorption after breaking 503bp Contig12916       PREDICTED:uncharacterizedproteinLOC100826288[Brachypodiumdistachyon] 309 2.98245e-82
whei_12016_a03f 2012 5' Dormant seed with water absorption after breaking 404bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 258 4.70849e-67
whei_13016_a03f 2012 5' Dormant seed with water absorption after breaking 514bp Contig35916       MBD1[Triticumaestivum] 329 2.2209e-88
whei_14016_a03f 2012 5' Dormant seed with water absorption after breaking 489bp Contig17298       heatshockprotein90[Triticumaestivum] 200 1.16519e-49
whei_15016_a03f 2012 5' Dormant seed with water absorption after breaking 357bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 240 1.00899e-61
whei_16016_a03f 2012 5' Dormant seed with water absorption after breaking 483bp Contig30486       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 316 2.50793e-84
whei_17016_a03f 2012 5' Dormant seed with water absorption after breaking 315bp Contig5332       predictedprotein[Hordeumvulgaresubsp.vulgare] 202 5.29159e-50
whei_19016_a03f 2012 5' Dormant seed with water absorption after breaking 497bp Contig339       PREDICTED:transcriptionfactorBTF3-likeisoform1[Brachypodiumdistachyon] 288 4.21016e-76
whei_3016_a03f 2012 5' Dormant seed with water absorption after breaking 589bp Contig12054       hypotheticalproteinBP354A_1954[Burkholderiapseudomallei354a] 36 7.56698
whei_6016_a03f 2012 5' Dormant seed with water absorption after breaking 382bp       predictedprotein[PostiaplacentaMad-698-R] 43 0.0237893
whei_9016_a03f 2012 5' Dormant seed with water absorption after breaking 517bp Contig12301       Chain6,StructureOfSignalRecognitionParticleReceptor(Sr)InComplexWithSignalRecognitionParticle(Srp)AndRibosomeNascentChainComplex 248 6.66567e-64
whei_10016_a03r 2012 3' Dormant seed with water absorption after breaking 665bp Contig2619       PREDICTED:uncharacterizedproteinLOC100826288[Brachypodiumdistachyon] 286 3.38148e-75
whei_1016_a03r 2012 3' Dormant seed with water absorption after breaking 571bp Contig5962       ribosomalproteinS7[Triticumaestivum] 304 1.3696e-80
whei_12016_a03r 2012 3' Dormant seed with water absorption after breaking 44bp            
whei_13016_a03r 2012 3' Dormant seed with water absorption after breaking 652bp Contig35916       MBD1[Triticumaestivum] 340 1.85851e-91
whei_14016_a03r 2012 3' Dormant seed with water absorption after breaking 384bp Contig17298       heatshockprotein90[Triticumaestivum] 108 5.99758e-22
whei_15016_a03r 2012 3' Dormant seed with water absorption after breaking 338bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 145 4.38369e-33
whei_16016_a03r 2012 3' Dormant seed with water absorption after breaking 608bp Contig30486       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 294 1.28845e-77
whei_17016_a03r 2012 3' Dormant seed with water absorption after breaking 503bp Contig5332       PREDICTED:40SribosomalproteinS5-2-like[Brachypodiumdistachyon] 275 4.77262e-72
whei_19016_a03r 2012 3' Dormant seed with water absorption after breaking 624bp Contig339       PREDICTED:transcriptionfactorBTF3-likeisoform1[Brachypodiumdistachyon] 308 9.38325e-82
whei_3016_a03r 2012 3' Dormant seed with water absorption after breaking 581bp Contig12054       unknown[Zeamays] 46 0.00541818
whei_6016_a03r 2012 3' Dormant seed with water absorption after breaking 583bp       PREDICTED:ubiquitin-conjugatingenzymeE228-like[Brachypodiumdistachyon] 228 7.02919e-59
whei_9016_a03r 2012 3' Dormant seed with water absorption after breaking 520bp       Chain6,StructureOfSignalRecognitionParticleReceptor(Sr)InComplexWithSignalRecognitionParticle(Srp)AndRibosomeNascentChainComplex 248 6.66567e-64
whei_10016_a04f 2012 5' Dormant seed with water absorption after breaking 576bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 355 5.36216e-96
whei_13016_a04f 2012 5' Dormant seed with water absorption after breaking 263bp Contig1037       predictedprotein[Hordeumvulgaresubsp.vulgare] 108 6.05447e-22
whei_14016_a04f 2012 5' Dormant seed with water absorption after breaking 490bp       HSP70,partial[Triticumaestivum] 312 2.76029e-83
whei_17016_a04f 2012 5' Dormant seed with water absorption after breaking 314bp       predictedprotein[ThalassiosirapseudonanaCCMP1335] 42 0.0678888
whei_18016_a04f 2012 5' Dormant seed with water absorption after breaking 501bp       PREDICTED:probableleucine-richrepeatreceptor-likeproteinkinaseAt5g63930-like[Brachypodiumdistachyon] 298 4.0309e-79
whei_19016_a04f 2012 5' Dormant seed with water absorption after breaking 561bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 360 1.53289e-97
whei_20016_a04f 2012 5' Dormant seed with water absorption after breaking 362bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 206 2.10055e-51
whei_2016_a04f 2012 5' Dormant seed with water absorption after breaking 485bp Contig10794       predictedprotein[Hordeumvulgaresubsp.vulgare] 341 5.57415e-92
whei_3016_a04f 2012 5' Dormant seed with water absorption after breaking 367bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 213 2.23548e-53
whei_4016_a04f 2012 5' Dormant seed with water absorption after breaking 461bp       putativedolichyl-phosphate-mannose-proteinmannosyltransferase[AchromobacterxylosoxidansAXX-A] 38 0.753122
whei_5016_a04f 2012 5' Dormant seed with water absorption after breaking 576bp Contig12688       14-3-3protein[Triticumaestivum] 337 1.13742e-90
whei_6016_a04f 2012 5' Dormant seed with water absorption after breaking 408bp       unnamedproteinproduct[Vitisvinifera] 104 9.84536e-30
whei_7016_a04f 2012 5' Dormant seed with water absorption after breaking 474bp       gamma-thionin[Hordeumvulgaresubsp.vulgare] 142 3.73622e-32
whei_9016_a04f 2012 5' Dormant seed with water absorption after breaking 371bp Contig16204       hypotheticalprotein[Zeamays] 116 2.23761e-24
whei_10016_a04r 2012 3' Dormant seed with water absorption after breaking 640bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 226 3.76649e-57
whei_1016_a04r 2012 3' Dormant seed with water absorption after breaking 555bp Contig5962       ribosomalproteinS7[Triticumaestivum] 298 6.88868e-79
whei_12016_a04r 2012 3' Dormant seed with water absorption after breaking 315bp Contig11275       cyclophilinA-1[Triticumaestivum] 79 5.01143e-13
whei_13016_a04r 2012 3' Dormant seed with water absorption after breaking 667bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 275 1.02997e-71
whei_14016_a04r 2012 3' Dormant seed with water absorption after breaking 622bp       HSP70,partial[Triticumaestivum] 311 1.09343e-82
whei_17016_a04r 2012 3' Dormant seed with water absorption after breaking 610bp       PREDICTED:uncharacterizedproteinC3orf54-like[Susscrofa] 42 0.0685625
whei_18016_a04r 2012 3' Dormant seed with water absorption after breaking 642bp       PREDICTED:probableleucine-richrepeatreceptor-likeproteinkinaseAt5g63930-like[Brachypodiumdistachyon] 282 4.42863e-74
whei_19016_a04r 2012 3' Dormant seed with water absorption after breaking 620bp Contig2090       predictedprotein[Hordeumvulgaresubsp.vulgare] 303 2.24871e-80
whei_20016_a04r 2012 3' Dormant seed with water absorption after breaking 538bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 199 4.03908e-49
whei_2016_a04r 2012 3' Dormant seed with water absorption after breaking 540bp Contig10794       predictedprotein[Hordeumvulgaresubsp.vulgare] 273 2.20095e-71
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