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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 9639
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whvd_10015_a01f 2012 5' Shoot grown with dessication 708bp Contig5834       putativecarbonicanhydrase[Triticumturgidumsubsp.durumxSecalecereale] 434 1.50232e-119
whvd_16015_a01f 2012 5' Shoot grown with dessication 511bp       fructose-1,6-bisphosphatase,cytosolic,putative,expressed[Triticumaestivum] 343 1.45681e-92
whvd_18015_a01f 2012 5' Shoot grown with dessication 291bp       predictedprotein[Populustrichocarpa] 37 1.72173
whvd_3015_a01f 2012 5' Shoot grown with dessication 112bp Contig11523       vacuolarATPsynthase16kDaproteolipidsubunit[Zeamays] 64 1.72068e-08
whvd_4015_a01f 2012 5' Shoot grown with dessication 36bp            
whvd_8015_a01f 2012 5' Shoot grown with dessication 573bp Contig7266       predictedprotein[Hordeumvulgaresubsp.vulgare] 172 8.12301e-41
whvd_9015_a01f 2012 5' Shoot grown with dessication 116bp Contig6435            
whvd_10015_a01r 2012 3' Shoot grown with dessication 612bp Contig5834       putativecarbonicanhydrase[Triticumturgidumsubsp.durumxSecalecereale] 241 1.02027e-61
whvd_12015_a01r 2012 3' Shoot grown with dessication 237bp Contig7773       predictedprotein[Hordeumvulgaresubsp.vulgare] 151 6.17615e-35
whvd_15015_a01r 2012 3' Shoot grown with dessication 42bp            
whvd_16015_a01r 2012 3' Shoot grown with dessication 99bp Contig11955       fructose-1,6-bisphosphatase,cytosolic,putative,expressed[Triticumaestivum] 72 6.13036e-11
whvd_18015_a01r 2012 3' Shoot grown with dessication 290bp       predictedprotein[Populustrichocarpa] 36 3.83562
whvd_19015_a01r 2012 3' Shoot grown with dessication 168bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 57 1.21109e-06
whvd_3015_a01r 2012 3' Shoot grown with dessication 608bp Contig11523       vacuolarH+-ATPase16kDaproteolipidsubunitc[Aeluropuslittoralis] 245 5.25538e-63
whvd_8015_a01r 2012 3' Shoot grown with dessication 547bp Contig7266       predictedprotein[Hordeumvulgaresubsp.vulgare] 195 4.53724e-48
whvd_9015_a01r 2012 3' Shoot grown with dessication 55bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 41 0.111573
whvd_10015_a02f 2012 5' Shoot grown with dessication 728bp Contig30086       predictedprotein[Hordeumvulgaresubsp.vulgare] 487 1.57832e-135
whvd_11015_a02f 2012 5' Shoot grown with dessication 656bp Contig6899       predictedprotein[Hordeumvulgaresubsp.vulgare] 408 5.69424e-112
whvd_12015_a02f 2012 5' Shoot grown with dessication 681bp Contig2244       RecName:Full=S-adenosylmethioninesynthase3;Short=AdoMetsynthase3;AltName:Full=Methionineadenosyltransferase3;Short=MAT3 429 4.39344e-118
whvd_14015_a02f 2012 5' Shoot grown with dessication 417bp       PREDICTED:glycerol-3-phosphatedehydrogenase[NAD(P)+]-like[Brachypodiumdistachyon] 147 1.54667e-33
whvd_15015_a02f 2012 5' Shoot grown with dessication 754bp Contig7694       putativecarbonicanhydrase[Triticumturgidumsubsp.durumxSecalecereale] 492 5.32691e-137
whvd_16015_a02f 2012 5' Shoot grown with dessication 96bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 71 1.37386e-10
whvd_17015_a02f 2012 5' Shoot grown with dessication 707bp Contig6460       phosphoethanolaminemethyltransferase[Triticumaestivum] 494 1.59766e-137
whvd_4015_a02f 2012 5' Shoot grown with dessication 537bp Contig7295       ribulose-1,5-bisphosphatecarboxylaseactivase[Triticumaestivum] 145 5.76315e-52
whvd_5015_a02f 2012 5' Shoot grown with dessication 493bp Contig22239       predictedprotein[Hordeumvulgaresubsp.vulgare] 238 5.01948e-61
whvd_7015_a02f 2012 5' Shoot grown with dessication 545bp Contig14117       serinehydroxymethyltransferase[Triticummonococcum] 198 5.35968e-49
whvd_8015_a02f 2012 5' Shoot grown with dessication 641bp Contig6895       predictedprotein[Hordeumvulgaresubsp.vulgare] 411 8.25574e-113
whvd_9015_a02f 2012 5' Shoot grown with dessication 733bp Contig13223       predictedprotein[Hordeumvulgaresubsp.vulgare] 463 3.21796e-128
whvd_10015_a02r 2012 3' Shoot grown with dessication 678bp Contig30086       putativehistoneacetyltransferaseELP3[Hordeumvulgare] 396 2.38951e-108
whvd_1015_a02r 2012 3' Shoot grown with dessication 579bp Contig1683       predictedprotein[Hordeumvulgaresubsp.vulgare] 282 3.38209e-74
whvd_11015_a02r 2012 3' Shoot grown with dessication 480bp Contig6899       morphogenesisprotein[Leymussecalinus] 238 4.95812e-61
whvd_12015_a02r 2012 3' Shoot grown with dessication 578bp Contig2244       S-adenosylmethioninesynthetase2[Triticummonococcum] 316 2.1135e-84
whvd_14015_a02r 2012 3' Shoot grown with dessication 353bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 105 5.10544e-21
whvd_15015_a02r 2012 3' Shoot grown with dessication 466bp Contig5834       putativecarbonicanhydrase[Triticumturgidumsubsp.durumxSecalecereale] 136 2.7136e-30
whvd_17015_a02r 2012 3' Shoot grown with dessication 276bp Contig6460       PREDICTED:phosphoethanolamineN-methyltransferase1-like[Brachypodiumdistachyon] 87 1.86006e-15
whvd_3015_a02r 2012 3' Shoot grown with dessication 87bp            
whvd_4015_a02r 2012 3' Shoot grown with dessication 229bp Contig20503       ribulose-1,5-bisphosphatecarboxylaseactivase[Triticumaestivum] 86 4.21884e-15
whvd_5015_a02r 2012 3' Shoot grown with dessication 455bp Contig22239       predictedprotein[Hordeumvulgaresubsp.vulgare] 251 5.71035e-65
whvd_7015_a02r 2012 3' Shoot grown with dessication 514bp Contig14117       serinehydroxymethyltransferase[Triticummonococcum] 210 1.50358e-52
whvd_8015_a02r 2012 3' Shoot grown with dessication 614bp Contig6895       PREDICTED:chlorophylla-bbindingprotein3C,chloroplastic-likeisoform1[Brachypodiumdistachyon] 399 3.82345e-109
whvd_9015_a02r 2012 3' Shoot grown with dessication 703bp Contig13223       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 4.16748e-98
whvd_1016_a03f 2012 5' Shoot grown with dessication 258bp Contig35491       ChainK,ImprovedModelOfPlantPhotosystemI 56 3.59092e-06
whvd_11016_a03f 2012 5' Shoot grown with dessication 532bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 79 4.37285e-13
whvd_12016_a03f 2012 5' Shoot grown with dessication 314bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 99 3.58311e-19
whvd_13016_a03f 2012 5' Shoot grown with dessication 682bp Contig7587       PREDICTED:uncharacterizedproteinLOC100821847[Brachypodiumdistachyon] 380 1.79201e-103
whvd_14016_a03f 2012 5' Shoot grown with dessication 51bp Contig32969       chloroplastglutaminesynthetaseisoform2-1[Secalecereale] 46 0.00308297
whvd_15016_a03f 2012 5' Shoot grown with dessication 748bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 483 2.43103e-134
whvd_16016_a03f 2012 5' Shoot grown with dessication 34bp            
whvd_17016_a03f 2012 5' Shoot grown with dessication 673bp Contig5630       RecName:Full=Magnesium-protoporphyrinIXmonomethylester[oxidative]cyclase,chloroplastic;Short=Mg-protoporphyrinIXmonomethylesteroxidativecyclase;AltName:Full=ProteinXantha-l;Flags:Precursor 428 1.31737e-120
whvd_18016_a03f 2012 5' Shoot grown with dessication 578bp       PREDICTED:preproteintranslocasesubunitsecY,chloroplastic-like[Brachypodiumdistachyon] 339 2.33133e-91
whvd_5016_a03f 2012 5' Shoot grown with dessication 733bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.50287e-98
whvd_7016_a03f 2012 5' Shoot grown with dessication 564bp Contig6840       ATPsynthasesubunit[Triticumaestivum] 227 1.20937e-57
whvd_8016_a03f 2012 5' Shoot grown with dessication 723bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 259 6.85752e-67
whvd_9016_a03f 2012 5' Shoot grown with dessication 752bp       granule-boundstarchsynthaseI[Oryzarufipogon] 47 0.0034403
whvd_1016_a03r 2012 3' Shoot grown with dessication 242bp Contig35491       ChainK,ImprovedModelOfPlantPhotosystemI 73 2.78217e-11
whvd_11016_a03r 2012 3' Shoot grown with dessication 503bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 79 3.84347e-13
whvd_12016_a03r 2012 3' Shoot grown with dessication 70bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 52 3.62542e-05
whvd_13016_a03r 2012 3' Shoot grown with dessication 280bp Contig7587       shoot1protein[Loliumperenne] 130 2.48456e-28
whvd_15016_a03r 2012 3' Shoot grown with dessication 699bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 332 7.87778e-89
whvd_17016_a03r 2012 3' Shoot grown with dessication 620bp Contig5630       RecName:Full=Magnesium-protoporphyrinIXmonomethylester[oxidative]cyclase,chloroplastic;Short=Mg-protoporphyrinIXmonomethylesteroxidativecyclase;AltName:Full=ProteinXantha-l;Flags:Precursor 235 9.8223e-60
whvd_18016_a03r 2012 3' Shoot grown with dessication 692bp Contig7267       PREDICTED:preproteintranslocasesubunitsecY,chloroplastic-like[Brachypodiumdistachyon] 251 1.31128e-64
whvd_19016_a03r 2012 3' Shoot grown with dessication 399bp       PREDICTED:photosystemII22kDaprotein,chloroplastic-like[Brachypodiumdistachyon] 189 3.53689e-46
whvd_5016_a03r 2012 3' Shoot grown with dessication 679bp Contig6435       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 349 4.42411e-94
whvd_7016_a03r 2012 3' Shoot grown with dessication 543bp Contig6840       ATPsynthasesubunit[Triticumaestivum] 256 2.84221e-66
whvd_8016_a03r 2012 3' Shoot grown with dessication 692bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.54897e-65
whvd_9016_a03r 2012 3' Shoot grown with dessication 697bp       predictedprotein[Nematostellavectensis] 42 0.123392
whvd_1016_a04f 2012 5' Shoot grown with dessication 32bp            
whvd_11016_a04f 2012 5' Shoot grown with dessication 707bp Contig2567       methioninesynthase1enzyme[Hordeumvulgaresubsp.vulgare] 472 3.81152e-131
whvd_12016_a04f 2012 5' Shoot grown with dessication 665bp Contig13085       aminoacidselectivechannelprotein[Hordeumvulgaresubsp.vulgare] 283 3.73866e-74
whvd_13016_a04f 2012 5' Shoot grown with dessication 518bp Contig24981       predictedprotein[Hordeumvulgaresubsp.vulgare] 208 7.64421e-52
whvd_15016_a04f 2012 5' Shoot grown with dessication 752bp Contig7252       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.6993e-98
whvd_16016_a04f 2012 5' Shoot grown with dessication 709bp Contig7269       hypotheticalproteinOsJ_13849[OryzasativaJaponicaGroup] 42 0.0984144
whvd_17016_a04f 2012 5' Shoot grown with dessication 55bp Contig5630       unknown[Lotusjaponicus] 41 0.0617763
whvd_18016_a04f 2012 5' Shoot grown with dessication 312bp Contig12395       predictedprotein[NectriahaematococcampVI77-13-4] 36 4.88327
whvd_20016_a04f 2012 5' Shoot grown with dessication 696bp Contig4571       glutathione-S-transferase19E50[Triticumaestivum] 402 6.13475e-110
whvd_4016_a04f 2012 5' Shoot grown with dessication 724bp       phosphoethanolaminemethyltransferase[Triticumaestivum] 270 5.26509e-71
whvd_5016_a04f 2012 5' Shoot grown with dessication 443bp Contig7268       hypotheticalproteinPGTG_12186[Pucciniagraminisf.sp.triticiCRL75-36-700-3] 37 1.72216
whvd_6016_a04f 2012 5' Shoot grown with dessication 714bp       conservedhypotheticalprotein[AjellomycescapsulatusG186AR] 40 0.0330095
whvd_1016_a04r 2012 3' Shoot grown with dessication 321bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 64 6.81433e-13
whvd_11016_a04r 2012 3' Shoot grown with dessication 555bp Contig2567       cobalamin-independentmethioninesynthase[Triticummonococcum] 256 2.29854e-66
whvd_12016_a04r 2012 3' Shoot grown with dessication 631bp Contig13085       aminoacidselectivechannelprotein[Hordeumvulgaresubsp.vulgare] 283 3.26046e-74
whvd_13016_a04r 2012 3' Shoot grown with dessication 462bp Contig24981       predictedprotein[Hordeumvulgaresubsp.vulgare] 229 2.30345e-58
whvd_15016_a04r 2012 3' Shoot grown with dessication 653bp Contig7252       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 314 1.88583e-83
whvd_16016_a04r 2012 3' Shoot grown with dessication 699bp Contig7269       AlNc14C23G2375[AlbugolaibachiiNc14] 37 5.18417
whvd_17016_a04r 2012 3' Shoot grown with dessication 567bp Contig5630       RecName:Full=Magnesium-protoporphyrinIXmonomethylester[oxidative]cyclase,chloroplastic;Short=Mg-protoporphyrinIXmonomethylesteroxidativecyclase;AltName:Full=ProteinXantha-l;Flags:Precursor 205 8.50668e-51
whvd_18016_a04r 2012 3' Shoot grown with dessication 281bp Contig12395            
whvd_20016_a04r 2012 3' Shoot grown with dessication 597bp Contig4571       glutathione-S-transferase19E50[Triticumaestivum] 306 3.14697e-81
whvd_2016_a04r 2012 3' Shoot grown with dessication 56bp Contig5761       PREDICTED:uncharacterizedproteinLOC100840579[Brachypodiumdistachyon] 42 0.0293613
whvd_4016_a04r 2012 3' Shoot grown with dessication 684bp       phosphoethanolaminemethyltransferase[Triticumaestivum] 270 2.66981e-70
whvd_5016_a04r 2012 3' Shoot grown with dessication 170bp Contig7268            
whvd_6016_a04r 2012 3' Shoot grown with dessication 671bp Contig3784       PREDICTED:hypotheticalprotein[Rattusnorvegicus] 51 0.000240731
whvd_7016_a04r 2012 3' Shoot grown with dessication 386bp       translationally-controlledtumorprotein[Triticumaestivum] 185 6.55877e-45
whvd_10031_a05f 2012 5' Shoot grown with dessication 53bp Contig22065       PREDICTED:14-3-3-likeproteinA-like[Brachypodiumdistachyon] 38 0.683017
whvd_11031_a05f 2012 5' Shoot grown with dessication 612bp       type1nonspecificlipidtransferproteinprecursor[Triticumaestivum] 208 9.57163e-52
whvd_12031_a05f 2012 5' Shoot grown with dessication 657bp       PREDICTED:ATP-dependentDNAhelicaseQ-like2-like[Brachypodiumdistachyon] 255 1.05228e-65
whvd_13031_a05f 2012 5' Shoot grown with dessication 712bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 255 9.61382e-66
whvd_14031_a05f 2012 5' Shoot grown with dessication 718bp Contig11085       predictedprotein[Hordeumvulgaresubsp.vulgare] 440 2.80719e-121
whvd_17031_a05f 2012 5' Shoot grown with dessication 351bp Contig20206       PREDICTED:uncharacterizedproteinC2orf16[Musmusculus] 36 3.81856
whvd_18031_a05f 2012 5' Shoot grown with dessication 624bp Contig6670       chlorophylla-bbindingprotein[Triticumaestivum] 427 1.36725e-117
whvd_20031_a05f 2012 5' Shoot grown with dessication 669bp Contig1979       cyclophilinA-1[Triticumaestivum] 361 1.0928e-97
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