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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 5812
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whyd_1001_a01r 2012 3' Spikelet at late flowering 437bp Contig36430       alphatubulin-2A[Triticumaestivum] 206 2.09448e-51
whyd_18002_a01r 2012 3' Spikelet at late flowering 490bp Contig36577       RecName:Full=HMG1/2-likeprotein 135 7.85199e-30
whyd_23001_a01r 2012 3' Spikelet at late flowering 191bp       PREDICTED:uncharacterizedproteinLOC100839346[Brachypodiumdistachyon] 108 7.94823e-22
whyd_11001_a01r 2012 3' Spikelet at late flowering 517bp Contig7640       PREDICTED:uncharacterizedproteinLOC100826726[Brachypodiumdistachyon] 204 1.10382e-50
whyd_13001_a01r 2012 3' Spikelet at late flowering 31bp            
whyd_14001_a01r 2012 3' Spikelet at late flowering 444bp Contig9223       predictedprotein[Hordeumvulgaresubsp.vulgare] 236 2.52612e-60
whyd_15001_a01r 2012 3' Spikelet at late flowering 385bp       proteophosphoglycanppg4[LeishmaniabraziliensisMHOM/BR/75/M2904] 31 0.0356778
whyd_16001_a01r 2012 3' Spikelet at late flowering 554bp Contig3825       RecName:Full=HistoneH2A.2.2 271 1.17776e-70
whyd_17001_a01r 2012 3' Spikelet at late flowering 429bp Contig10049       predictedprotein[Hordeumvulgaresubsp.vulgare] 98 8.10188e-19
whyd_19001_a01r 2012 3' Spikelet at late flowering 535bp Contig5328       predictedprotein[Hordeumvulgaresubsp.vulgare] 291 9.98761e-77
whyd_20002_a01r 2012 3' Spikelet at late flowering 104bp Contig35787            
whyd_2002_a01r 2012 3' Spikelet at late flowering 498bp Contig10197       predictedprotein[Hordeumvulgaresubsp.vulgare] 259 2.73528e-67
whyd_21002_a01r 2012 3' Spikelet at late flowering 561bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 191 1.2316e-46
whyd_24001_a01r 2012 3' Spikelet at late flowering 190bp Contig35788       HvB12D[Hordeumvulgaresubsp.vulgare] 52 3.97588e-05
whyd_25001_a01r 2012 3' Spikelet at late flowering 365bp Contig10944       PREDICTED:V-typeprotonATPasesubunitB1-like[Brachypodiumdistachyon] 221 8.20883e-56
whyd_7001_a01r 2012 3' Spikelet at late flowering 486bp Contig7643       PREDICTED:26Sproteaseregulatorysubunit6Ahomolog[Brachypodiumdistachyon] 236 1.93366e-60
whyd_10017_a02r 2012 3' Spikelet at late flowering 345bp Contig4043       alpha-tubulin[Alopecurusaequalis] 154 9.69495e-36
whyd_13017_a02r 2012 3' Spikelet at late flowering 362bp Contig9374       PREDICTED:60SribosomalproteinL39-like[Brachypodiumdistachyon] 116 2.18891e-24
whyd_14017_a02r 2012 3' Spikelet at late flowering 505bp Contig4289       RecName:Full=ProteinH2A.7;AltName:Full=wcH2A-10;AltName:Full=wcH2A-4 217 1.181e-54
whyd_16017_a02r 2012 3' Spikelet at late flowering 185bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 35 8.6068
whyd_17017_a02r 2012 3' Spikelet at late flowering 513bp Contig25921       predictedprotein[Hordeumvulgaresubsp.vulgare] 206 2.83564e-51
whyd_19017_a02r 2012 3' Spikelet at late flowering 417bp Contig35789       histoneH4[Zeamays] 157 2.73409e-40
whyd_21018_a02r 2012 3' Spikelet at late flowering 505bp Contig26918       predictedprotein[Hordeumvulgaresubsp.vulgare] 241 7.83313e-62
whyd_24017_a02r 2012 3' Spikelet at late flowering 532bp Contig3362       predictedprotein[Hordeumvulgaresubsp.vulgare] 110 2.31331e-22
whyd_26017_a02r 2012 3' Spikelet at late flowering 349bp Contig35790       PREDICTED:uncharacterizedproteinLOC100822449[Brachypodiumdistachyon] 93 2.01541e-17
whyd_27017_a02r 2012 3' Spikelet at late flowering 507bp Contig1801       predictedprotein[Hordeumvulgaresubsp.vulgare] 102 2.71559e-33
whyd_29017_a02r 2012 3' Spikelet at late flowering 477bp Contig742       PREDICTED:eukaryotictranslationinitiationfactor3subunitH-like[Brachypodiumdistachyon] 260 1.59848e-67
whyd_1033_a03r 2012 3' Spikelet at late flowering 242bp            
whyd_18034_a03r 2012 3' Spikelet at late flowering 514bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 250 1.71236e-64
whyd_11033_a03r 2012 3' Spikelet at late flowering 208bp Contig26081       SNF2familyDNA-dependentATPase[Physcomitrellapatenssubsp.patens] 37 2.21378
whyd_16033_a03r 2012 3' Spikelet at late flowering 406bp Contig3563       hypotheticalproteinOsI_38995[OryzasativaIndicaGroup] 91 1.30021e-16
whyd_17033_a03r 2012 3' Spikelet at late flowering 523bp Contig4726       predictedprotein[Hordeumvulgaresubsp.vulgare] 264 7.01266e-69
whyd_25033_a03r 2012 3' Spikelet at late flowering 523bp Contig13241       predictedprotein[Hordeumvulgaresubsp.vulgare] 272 2.5751e-71
whyd_26033_a03r 2012 3' Spikelet at late flowering 550bp Contig35793       predictedprotein[Hordeumvulgaresubsp.vulgare] 61 1.81545e-07
whyd_27033_a03r 2012 3' Spikelet at late flowering 527bp Contig24253       predictedprotein[Hordeumvulgaresubsp.vulgare] 260 1.76745e-67
whyd_28033_a03r 2012 3' Spikelet at late flowering 514bp       PREDICTED:40SribosomalproteinS14-like[Brachypodiumdistachyon] 226 2.02745e-57
whyd_3034_a03r 2012 3' Spikelet at late flowering 489bp Contig36430       alphatubulin-2A[Triticumaestivum] 250 1.28817e-64
whyd_7033_a03r 2012 3' Spikelet at late flowering 406bp Contig564       predictedprotein[Hordeumvulgaresubsp.vulgare] 220 1.84824e-55
whyd_9034_a03r 2012 3' Spikelet at late flowering 458bp       LysRfamilytranscriptionalregulator[MycobacteriumcolombienseCECT3035] 36 4.90311
whyd_22033_a03r 2012 3' Spikelet at late flowering 169bp            
whyd_1049_a04r 2012 3' Spikelet at late flowering 336bp Contig5993       predictedprotein[Hordeumvulgaresubsp.vulgare] 96 2.34412e-18
whyd_18050_a04r 2012 3' Spikelet at late flowering 550bp Contig127       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.97948e-54
whyd_10049_a04r 2012 3' Spikelet at late flowering 479bp Contig35795       predictedprotein[Hordeumvulgaresubsp.vulgare] 193 2.39972e-47
whyd_12049_a04r 2012 3' Spikelet at late flowering 478bp Contig11275       cyclophilinA-1[Triticumaestivum] 225 5.72419e-57
whyd_14049_a04r 2012 3' Spikelet at late flowering 388bp Contig12832       predictedprotein[Hordeumvulgaresubsp.vulgare] 200 1.15505e-49
whyd_15049_a04r 2012 3' Spikelet at late flowering 510bp Contig3077       predictedprotein[Hordeumvulgaresubsp.vulgare] 194 1.09299e-47
whyd_16049_a04r 2012 3' Spikelet at late flowering 338bp Contig24198       predictedprotein[Hordeumvulgaresubsp.vulgare] 162 4.52589e-38
whyd_2050_a04r 2012 3' Spikelet at late flowering 480bp Contig2467       RecName:Full=HistoneH2A.2.2 209 2.47757e-52
whyd_21050_a04r 2012 3' Spikelet at late flowering 496bp Contig3305       Pyrrolo-quinolinequinone[RhodopseudomonaspalustrisHaA2] 40 0.260809
whyd_24049_a04r 2012 3' Spikelet at late flowering 409bp Contig26843       predictedprotein[Hordeumvulgaresubsp.vulgare] 245 3.14532e-63
whyd_29049_a04r 2012 3' Spikelet at late flowering 429bp Contig36430       alphatubulin-2A[Triticumaestivum] 250 1.28102e-64
whyd_3050_a04r 2012 3' Spikelet at late flowering 518bp Contig36528       predictedprotein[Hordeumvulgaresubsp.vulgare] 272 4.31055e-71
whyd_6049_a04r 2012 3' Spikelet at late flowering 503bp Contig8959       hypotheticalproteinPANDA_018576[Ailuropodamelanoleuca] 209 3.21618e-52
whyd_7049_a04r 2012 3' Spikelet at late flowering 446bp Contig821       PREDICTED:60SribosomalproteinL27a-3-like[Brachypodiumdistachyon] 171 3.01158e-58
whyd_8049_a04r 2012 3' Spikelet at late flowering 523bp Contig19500       predictedprotein[Hordeumvulgaresubsp.vulgare] 151 8.65229e-35
whyd_22049_a04r 2012 3' Spikelet at late flowering 516bp Contig8820       predictedprotein[Hordeumvulgaresubsp.vulgare] 214 1.35993e-53
whyd_1065_a05r 2012 3' Spikelet at late flowering 255bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 69 5.37209e-10
whyd_18066_a05r 2012 3' Spikelet at late flowering 484bp Contig7027       plastidglutaminesynthetase2[Triticumaestivum] 203 2.36923e-50
whyd_4066_a05r 2012 3' Spikelet at late flowering 486bp Contig9370       predictedprotein[Hordeumvulgaresubsp.vulgare] 207 1.25059e-51
whyd_10065_a05r 2012 3' Spikelet at late flowering 94bp Contig5005            
whyd_11065_a05r 2012 3' Spikelet at late flowering 481bp Contig4240       PREDICTED:uncharacterizedproteinLOC100844886[Brachypodiumdistachyon] 200 1.95425e-49
whyd_12065_a05r 2012 3' Spikelet at late flowering 524bp Contig618       OSIGBa0096P03.8[OryzasativaIndicaGroup] 127 1.33796e-27
whyd_13065_a05r 2012 3' Spikelet at late flowering 512bp Contig8606       PREDICTED:40SribosomalproteinS13-1-like[Brachypodiumdistachyon] 155 4.2879e-36
whyd_14065_a05r 2012 3' Spikelet at late flowering 405bp Contig35796       predictedprotein[Hordeumvulgaresubsp.vulgare] 210 1.92051e-52
whyd_15065_a05r 2012 3' Spikelet at late flowering 528bp Contig2953       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 6.74752e-51
whyd_19065_a05r 2012 3' Spikelet at late flowering 433bp Contig10936       predictedprotein[Hordeumvulgaresubsp.vulgare] 216 2.04127e-54
whyd_2066_a05r 2012 3' Spikelet at late flowering 423bp Contig22645       predictedprotein[Hordeumvulgaresubsp.vulgare] 190 1.21474e-46
whyd_21066_a05r 2012 3' Spikelet at late flowering 490bp Contig10794       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 6.17837e-51
whyd_26065_a05r 2012 3' Spikelet at late flowering 381bp Contig917       heat-shockprotein[Secalecereale] 243 1.56012e-62
whyd_28065_a05r 2012 3' Spikelet at late flowering 446bp Contig3335       histoneH4[Zeamays] 211 8.66493e-53
whyd_29065_a05r 2012 3' Spikelet at late flowering 523bp Contig7490       PREDICTED:autophagy-relatedprotein8C-like[Brachypodiumdistachyon] 227 9.4999e-58
whyd_6065_a05r 2012 3' Spikelet at late flowering 512bp Contig8278       predictedprotein[Hordeumvulgaresubsp.vulgare] 277 7.48159e-73
whyd_8065_a05r 2012 3' Spikelet at late flowering 535bp Contig35797       Os05g0523300[OryzasativaJaponicaGroup] 244 1.04924e-62
whyd_9066_a05r 2012 3' Spikelet at late flowering 480bp       hypotheticalproteinPTSG_04670[Salpingoecasp.ATCC50818] 39 0.443461
whyd_22065_a05r 2012 3' Spikelet at late flowering 562bp Contig36667       predictedprotein[Hordeumvulgaresubsp.vulgare] 279 2.68172e-73
whyd_23081_a06r 2012 3' Spikelet at late flowering 444bp Contig9281       PREDICTED:histoneH2B.2-likeisoform1[Brachypodiumdistachyon] 223 1.69442e-56
whyd_10081_a06r 2012 3' Spikelet at late flowering 517bp Contig8453       predictedprotein[Hordeumvulgaresubsp.vulgare] 94 9.20695e-18
whyd_11081_a06r 2012 3' Spikelet at late flowering 527bp Contig8774       predictedprotein[Hordeumvulgaresubsp.vulgare] 372 3.1913e-101
whyd_13081_a06r 2012 3' Spikelet at late flowering 413bp Contig35800       saltstress-responsiveprotein[Triticumaestivum] 172 3.28798e-44
whyd_16081_a06r 2012 3' Spikelet at late flowering 472bp Contig35804       PREDICTED:uncharacterizedproteinLOC100830069[Brachypodiumdistachyon] 44 0.0139097
whyd_19081_a06r 2012 3' Spikelet at late flowering 154bp Contig10936       PREDICTED:aspartyl-tRNAsynthetase,cytoplasmic-like[Brachypodiumdistachyon] 61 1.11284e-07
whyd_20082_a06r 2012 3' Spikelet at late flowering 571bp Contig35805       predictedprotein[Hordeumvulgaresubsp.vulgare] 299 3.37344e-79
whyd_21082_a06r 2012 3' Spikelet at late flowering 548bp Contig35806       predictedprotein[Hordeumvulgaresubsp.vulgare] 226 3.19884e-57
whyd_25081_a06r 2012 3' Spikelet at late flowering 417bp Contig36756       MADS-boxtranscriptionfactorTaAGL14[Triticumaestivum] 190 1.54889e-46
whyd_28081_a06r 2012 3' Spikelet at late flowering 474bp Contig35802       PREDICTED:26Sproteasomenon-ATPaseregulatorysubunitRPN12A-like[Brachypodiumdistachyon] 210 1.12216e-52
whyd_29081_a06r 2012 3' Spikelet at late flowering 477bp Contig2842       RecName:Full=HistoneH2B.3;AltName:Full=wcH2B-8 230 1.03851e-58
whyd_5082_a06r 2012 3' Spikelet at late flowering 425bp Contig17558       PREDICTED:uncharacterizedproteinLOC100832863[Brachypodiumdistachyon] 154 9.60695e-36
whyd_6081_a06r 2012 3' Spikelet at late flowering 574bp Contig3215       predictedprotein[Hordeumvulgaresubsp.vulgare] 257 1.14536e-66
whyd_9082_a06r 2012 3' Spikelet at late flowering 280bp Contig35803       predictedprotein[Hordeumvulgaresubsp.vulgare] 69 5.20471e-10
whyd_1001_a07r 2012 3' Spikelet at late flowering 397bp       Receptor-likeproteinkinase[Medicagotruncatula] 36 5.02483
whyd_4002_a07r 2012 3' Spikelet at late flowering 345bp Contig19982       hypotheticalproteinSORBIDRAFT_08g016540[Sorghumbicolor] 133 1.76418e-29
whyd_10001_a07r 2012 3' Spikelet at late flowering 155bp Contig18806       predictedprotein[Hordeumvulgaresubsp.vulgare] 50 0.000256551
whyd_11001_a07r 2012 3' Spikelet at late flowering 551bp Contig18793       NAC-domaintranscriptionfactor[Triticumaestivum] 101 1.58305e-19
whyd_16001_a07r 2012 3' Spikelet at late flowering 525bp Contig9372       PREDICTED:uncharacterizedproteinDDB_G0288155-like[Brachypodiumdistachyon] 163 1.72386e-38
whyd_17001_a07r 2012 3' Spikelet at late flowering 469bp Contig11103       predictedprotein[Hordeumvulgaresubsp.vulgare] 41 0.0905625
whyd_21002_a07r 2012 3' Spikelet at late flowering 427bp Contig21812       PREDICTED:ubiquitin-60SribosomalproteinL40-2-like[Brachypodiumdistachyon] 252 2.59206e-65
whyd_26001_a07r 2012 3' Spikelet at late flowering 423bp Contig17532       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 1.69504e-48
whyd_27001_a07r 2012 3' Spikelet at late flowering 476bp Contig14983       predictedprotein[Hordeumvulgaresubsp.vulgare] 139 8.84886e-38
whyd_6001_a07r 2012 3' Spikelet at late flowering 460bp Contig26097       PREDICTED:polyadenylate-bindingprotein2-like[Brachypodiumdistachyon] 183 2.47247e-44
whyd_22001_a07r 2012 3' Spikelet at late flowering 261bp Contig35808            
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