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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 10270
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whsc_11015_a01f 2012 5' Shoot grown with cold treatment 595bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 389 3.69163e-106
whsc_14015_a01f 2012 5' Shoot grown with cold treatment 608bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 370 1.41468e-100
whsc_15015_a01f 2012 5' Shoot grown with cold treatment 589bp Contig10584       PREDICTED:uncharacterizedproteinLOC100826321[Brachypodiumdistachyon] 162 7.00083e-38
whsc_16015_a01f 2012 5' Shoot grown with cold treatment 549bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 368 6.9431e-100
whsc_17015_a01f 2012 5' Shoot grown with cold treatment 204bp       hypotheticalproteinSORBIDRAFT_07g024460[Sorghumbicolor] 107 1.74767e-21
whsc_18015_a01f 2012 5' Shoot grown with cold treatment 552bp Contig5133       glutathione-S-transferase28e45[Triticumaestivum] 321 9.73335e-86
whsc_19015_a01f 2012 5' Shoot grown with cold treatment 467bp Contig28116       histoneH4[Zeamays] 211 6.63748e-53
whsc_20015_a01f 2012 5' Shoot grown with cold treatment 85bp Contig21495       MBD2[Triticumaestivum] 61 8.40914e-08
whsc_3015_a01f 2012 5' Shoot grown with cold treatment 601bp       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 232 4.46853e-59
whsc_7015_a01f 2012 5' Shoot grown with cold treatment 582bp Contig569       ribosomalRNA-processingprotein46[Hordeumvulgaresubsp.vulgare] 340 1.8153e-91
whsc_9015_a01f 2012 5' Shoot grown with cold treatment 260bp Contig425       putative40SribosomalproteinS8[Prunusdulcis] 171 7.63243e-41
whsc_11015_a01r 2012 3' Shoot grown with cold treatment 561bp Contig23558       predictedprotein[Hordeumvulgaresubsp.vulgare] 157 2.00734e-36
whsc_14015_a01r 2012 3' Shoot grown with cold treatment 608bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 321 9.8425e-86
whsc_16015_a01r 2012 3' Shoot grown with cold treatment 633bp Contig6671       RecName:Full=T-complexprotein1subunitepsilon;Short=TCP-1-epsilon;AltName:Full=CCT-epsilon;AltName:Full=TCP-K19 278 1.04885e-72
whsc_18015_a01r 2012 3' Shoot grown with cold treatment 581bp Contig5133       glutathioneS-transferase1[Triticummonococcum] 351 7.87418e-95
whsc_19015_a01r 2012 3' Shoot grown with cold treatment 438bp Contig28116       histoneH4[Zeamays] 211 6.51087e-53
whsc_20015_a01r 2012 3' Shoot grown with cold treatment 59bp Contig21495       MBD2[Triticumaestivum] 37 0.996994
whsc_3015_a01r 2012 3' Shoot grown with cold treatment 576bp Contig9712       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 7.95029e-60
whsc_7015_a01r 2012 3' Shoot grown with cold treatment 581bp Contig569       ribosomalRNA-processingprotein46[Hordeumvulgaresubsp.vulgare] 209 4.83282e-52
whsc_9015_a01r 2012 3' Shoot grown with cold treatment 607bp Contig425       predictedprotein[Hordeumvulgaresubsp.vulgare] 284 1.00589e-74
whsc_11015_a02f 2012 5' Shoot grown with cold treatment 632bp Contig24983       putativeSETdomain-containingprotein[NeosporacaninumLiverpool] 51 0.000272349
whsc_12015_a02f 2012 5' Shoot grown with cold treatment 507bp Contig26393       PREDICTED:zincfingerprotein7-like[Brachypodiumdistachyon] 290 1.47043e-76
whsc_13015_a02f 2012 5' Shoot grown with cold treatment 610bp Contig24524       PREDICTED:DEAD-boxATP-dependentRNAhelicase56-like[Brachypodiumdistachyon] 361 8.70876e-98
whsc_14015_a02f 2012 5' Shoot grown with cold treatment 601bp       U1snRNP-interacting70kDaprotein[Triticumaestivum] 406 1.7289e-111
whsc_15015_a02f 2012 5' Shoot grown with cold treatment 573bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 298 5.75422e-79
whsc_17015_a02f 2012 5' Shoot grown with cold treatment 518bp Contig33734       UDP-D-glucoseepimerase3[Hordeumvulgare] 300 1.13173e-79
whsc_18015_a02f 2012 5' Shoot grown with cold treatment 524bp       dehydrin[Triticumdurum] 293 1.40973e-77
whsc_19015_a02f 2012 5' Shoot grown with cold treatment 522bp Contig3411       PREDICTED:adenosinekinase2-like[Brachypodiumdistachyon] 294 1.07939e-77
whsc_20015_a02f 2012 5' Shoot grown with cold treatment 477bp Contig9597       PREDICTED:UDP-glucose6-dehydrogenase-like[Brachypodiumdistachyon] 117 1.2871e-24
whsc_2015_a02f 2012 5' Shoot grown with cold treatment 651bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.71053e-98
whsc_3015_a02f 2012 5' Shoot grown with cold treatment 572bp Contig23967       RecName:Full=Translationally-controlledtumorproteinhomolog;Short=TCTP 341 5.92713e-92
whsc_6015_a02f 2012 5' Shoot grown with cold treatment 328bp Contig28610       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 6.15811e-51
whsc_8015_a02f 2012 5' Shoot grown with cold treatment 181bp       PREDICTED:transcriptioninitiationfactorIIAsubunit2-like[Brachypodiumdistachyon] 99 2.74368e-19
whsc_9015_a02f 2012 5' Shoot grown with cold treatment 36bp            
whsc_11015_a02r 2012 3' Shoot grown with cold treatment 658bp Contig5134       hypotheticalproteinAND_02159[Anophelesdarlingi] 47 0.0025515
whsc_12015_a02r 2012 3' Shoot grown with cold treatment 596bp Contig26393       PREDICTED:zincfingerprotein7-like[Brachypodiumdistachyon] 208 6.83784e-52
whsc_13015_a02r 2012 3' Shoot grown with cold treatment 578bp Contig24524       PREDICTED:DEAD-boxATP-dependentRNAhelicase56-like[Brachypodiumdistachyon] 314 1.04892e-83
whsc_14015_a02r 2012 3' Shoot grown with cold treatment 599bp Contig36244       U1snRNP-interacting70kDaprotein[Triticumaestivum] 293 2.10081e-77
whsc_15015_a02r 2012 3' Shoot grown with cold treatment 388bp       PREDICTED:uncharacterizedproteinLOC100824418[Brachypodiumdistachyon] 175 3.96308e-42
whsc_17015_a02r 2012 3' Shoot grown with cold treatment 577bp Contig33734       UDP-D-glucoseepimerase3[Hordeumvulgare] 267 1.92047e-69
whsc_18015_a02r 2012 3' Shoot grown with cold treatment 462bp       dehydrin[Triticumdurum] 178 7.95365e-43
whsc_19015_a02r 2012 3' Shoot grown with cold treatment 541bp Contig3411       PREDICTED:adenosinekinase2-like[Brachypodiumdistachyon] 277 1.52421e-72
whsc_20015_a02r 2012 3' Shoot grown with cold treatment 535bp Contig9597       PREDICTED:UDP-glucose6-dehydrogenase-like[Brachypodiumdistachyon] 203 2.09708e-50
whsc_2015_a02r 2012 3' Shoot grown with cold treatment 692bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 349 4.62074e-94
whsc_3015_a02r 2012 3' Shoot grown with cold treatment 668bp Contig23967       RecName:Full=Translationally-controlledtumorproteinhomolog;Short=TCTP 343 2.35802e-92
whsc_8015_a02r 2012 3' Shoot grown with cold treatment 370bp       PREDICTED:transcriptioninitiationfactorIIAsubunit2-like[Brachypodiumdistachyon] 120 2.64321e-25
whsc_10016_a03f 2012 5' Shoot grown with cold treatment 575bp       conservedhypotheticalprotein[LeishmaniamajorstrainFriedlin] 42 0.0579082
whsc_12016_a03f 2012 5' Shoot grown with cold treatment 655bp       beta-glucosidase[Triticumaestivum] 219 8.25636e-55
whsc_14016_a03f 2012 5' Shoot grown with cold treatment 564bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 309 2.4199e-82
whsc_15016_a03f 2012 5' Shoot grown with cold treatment 391bp Contig12266       dehydrin[Triticumdurum] 62 1.5748e-18
whsc_16016_a03f 2012 5' Shoot grown with cold treatment 621bp       hypotheticalproteinOsJ_03106[OryzasativaJaponicaGroup] 75 1.30081e-11
whsc_17016_a03f 2012 5' Shoot grown with cold treatment 502bp Contig34878       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 294 9.92846e-78
whsc_18016_a03f 2012 5' Shoot grown with cold treatment 192bp            
whsc_20016_a03f 2012 5' Shoot grown with cold treatment 53bp Contig18577            
whsc_2016_a03f 2012 5' Shoot grown with cold treatment 555bp       PREDICTED:cystathioninegamma-synthase,chloroplastic-like[Brachypodiumdistachyon] 189 3.45068e-46
whsc_4016_a03f 2012 5' Shoot grown with cold treatment 667bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 430 1.46673e-118
whsc_7016_a03f 2012 5' Shoot grown with cold treatment 305bp       smalluORF[Leymuschinensis] 96 3.06701e-18
whsc_8016_a03f 2012 5' Shoot grown with cold treatment 312bp       hypotheticalprotein[EntamoebadisparSAW760] 31 0.318219
whsc_10016_a03r 2012 3' Shoot grown with cold treatment 545bp       conservedhypotheticalprotein[LeishmaniamajorstrainFriedlin] 42 0.0491555
whsc_12016_a03r 2012 3' Shoot grown with cold treatment 593bp Contig5194       beta-glucosidase[Triticumaestivum] 181 1.50336e-43
whsc_14016_a03r 2012 3' Shoot grown with cold treatment 640bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 182 6.23723e-44
whsc_15016_a03r 2012 3' Shoot grown with cold treatment 381bp Contig12266       dehydrin[Triticumdurum] 82 1.81877e-24
whsc_16016_a03r 2012 3' Shoot grown with cold treatment 604bp       hypotheticalproteinOsJ_03106[OryzasativaJaponicaGroup] 51 0.000141182
whsc_17016_a03r 2012 3' Shoot grown with cold treatment 459bp Contig34878       PREDICTED:LOWQUALITYPROTEIN:polyubiquitin-C-like[Brachypodiumdistachyon] 168 6.30206e-40
whsc_18016_a03r 2012 3' Shoot grown with cold treatment 43bp            
whsc_19016_a03r 2012 3' Shoot grown with cold treatment 412bp Contig5135       predictedprotein[Hordeumvulgaresubsp.vulgare] 126 2.76967e-27
whsc_2016_a03r 2012 3' Shoot grown with cold treatment 530bp Contig13057       PREDICTED:cystathioninegamma-synthase,chloroplastic-like[Brachypodiumdistachyon] 217 1.75488e-54
whsc_4016_a03r 2012 3' Shoot grown with cold treatment 729bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 237 2.84477e-60
whsc_7016_a03r 2012 3' Shoot grown with cold treatment 616bp Contig9283       S-adenosylmethioninedecarboxylase[Triticumaestivum] 316 3.30591e-84
whsc_8016_a03r 2012 3' Shoot grown with cold treatment 282bp Contig6337       PREDICTED:NADHdehydrogenase[ubiquinone]1betasubcomplexsubunit7-likeisoform1[Brachypodiumdistachyon] 46 0.00361274
whsc_10016_a04f 2012 5' Shoot grown with cold treatment 276bp       unnamedproteinproduct[PseudomonasfluorescensPf-5] 35 6.42267
whsc_1016_a04f 2012 5' Shoot grown with cold treatment 256bp       putativeTdLSC37protein[Triticumdurum] 118 5.91205e-25
whsc_12016_a04f 2012 5' Shoot grown with cold treatment 569bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 364 6.42333e-99
whsc_13016_a04f 2012 5' Shoot grown with cold treatment 628bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 396 3.4217e-108
whsc_15016_a04f 2012 5' Shoot grown with cold treatment 550bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 362 2.85987e-98
whsc_16016_a04f 2012 5' Shoot grown with cold treatment 422bp Contig15046       RecName:Full=UTP--glucose-1-phosphateuridylyltransferase;AltName:Full=UDP-glucosepyrophosphorylase;Short=UDPGP;Short=UGPase 113 1.88717e-23
whsc_17016_a04f 2012 5' Shoot grown with cold treatment 618bp Contig8602       beta-glucosidase[Triticumaestivum] 433 1.8817e-119
whsc_18016_a04f 2012 5' Shoot grown with cold treatment 576bp Contig22065       14-3-3protein[Triticumaestivum] 230 1.49936e-58
whsc_19016_a04f 2012 5' Shoot grown with cold treatment 620bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 257 2.41371e-66
whsc_20016_a04f 2012 5' Shoot grown with cold treatment 561bp Contig9597       PREDICTED:UDP-glucose6-dehydrogenase-like[Brachypodiumdistachyon] 167 2.48735e-39
whsc_2016_a04f 2012 5' Shoot grown with cold treatment 494bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 193 1.85176e-47
whsc_3016_a04f 2012 5' Shoot grown with cold treatment 217bp Contig24067            
whsc_4016_a04f 2012 5' Shoot grown with cold treatment 86bp       PREDICTED:tubulinalpha-1chain-like[Brachypodiumdistachyon] 63 2.89018e-08
whsc_6016_a04f 2012 5' Shoot grown with cold treatment 614bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 401 7.704e-110
whsc_9016_a04f 2012 5' Shoot grown with cold treatment 485bp Contig1213       metallothionein-likeproteintype3[Hordeumvulgaresubsp.vulgare] 135 6.067e-30
whsc_1016_a04r 2012 3' Shoot grown with cold treatment 610bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 151 1.36873e-34
whsc_11016_a04r 2012 3' Shoot grown with cold treatment 471bp Contig14370       predictedprotein[Hordeumvulgaresubsp.vulgare] 250 1.67654e-64
whsc_12016_a04r 2012 3' Shoot grown with cold treatment 576bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 332 3.72204e-89
whsc_13016_a04r 2012 3' Shoot grown with cold treatment 570bp Contig11666       PREDICTED:microtubule-actincross-linkingfactor1-like[Nasoniavitripennis] 35 8.92639
whsc_14016_a04r 2012 3' Shoot grown with cold treatment 37bp            
whsc_15016_a04r 2012 3' Shoot grown with cold treatment 583bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 151 9.30928e-35
whsc_16016_a04r 2012 3' Shoot grown with cold treatment 387bp Contig15046       RecName:Full=UTP--glucose-1-phosphateuridylyltransferase;AltName:Full=UDP-glucosepyrophosphorylase;Short=UDPGP;Short=UGPase 141 8.31613e-32
whsc_17016_a04r 2012 3' Shoot grown with cold treatment 611bp Contig9237       ChainA,CrystalStructureOfAMutantBeta-GlucosidaseInWheatComplexedWithDimboa-Glc 170 2.84736e-40
whsc_18016_a04r 2012 3' Shoot grown with cold treatment 346bp Contig22065       14-3-3protein[Triticumaestivum] 59 3.23753e-07
whsc_19016_a04r 2012 3' Shoot grown with cold treatment 580bp Contig8342       predictedprotein[Hordeumvulgaresubsp.vulgare] 252 3.81155e-65
whsc_20016_a04r 2012 3' Shoot grown with cold treatment 507bp Contig9597       PREDICTED:UDP-glucose6-dehydrogenase-like[Brachypodiumdistachyon] 184 8.7008e-45
whsc_2016_a04r 2012 3' Shoot grown with cold treatment 527bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 193 2.03162e-47
whsc_3016_a04r 2012 3' Shoot grown with cold treatment 188bp Contig24067            
whsc_6016_a04r 2012 3' Shoot grown with cold treatment 654bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 312 7.16613e-83
whsc_8016_a04r 2012 3' Shoot grown with cold treatment 254bp       PREDICTED:NADHdehydrogenase[ubiquinone]1betasubcomplexsubunit7-likeisoform1[Brachypodiumdistachyon] 46 0.00372893
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