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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 5916
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whsl_14001_a01r 2012 3' Seed DPA30 359bp Contig32411       predictedprotein[Hordeumvulgaresubsp.vulgare] 146 2.58977e-33
whsl_19002_a01r 2012 3' Seed DPA30 32bp            
whsl_31001_a01r 2012 3' Seed DPA30 543bp Contig955       predictedprotein[Hordeumvulgaresubsp.vulgare] 337 1.26098e-90
whsl_32002_a01r 2012 3' Seed DPA30 249bp Contig955       predictedprotein[Hordeumvulgaresubsp.vulgare] 170 2.16912e-40
whsl_4001_a01r 2012 3' Seed DPA30 338bp       gamma-thionin[Hordeumvulgaresubsp.vulgare] 114 1.08225e-23
whsl_5001_a01r 2012 3' Seed DPA30 493bp Contig4732       putativemixedbetaglucansynthase[Triticumaestivum] 88 1.10075e-15
whsl_10001_a01r 2012 3' Seed DPA30 469bp Contig12182       predictedprotein[Hordeumvulgaresubsp.vulgare] 198 7.56063e-49
whsl_11001_a01r 2012 3' Seed DPA30 483bp Contig10183       predictedprotein[Hordeumvulgaresubsp.vulgare] 256 2.2978e-66
whsl_23001_a01r 2012 3' Seed DPA30 421bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 190 1.21474e-46
whsl_24001_a01r 2012 3' Seed DPA30 375bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 221 6.42493e-56
whsl_25002_a01r 2012 3' Seed DPA30 235bp Contig10163       putativeTdLFC69protein[Triticumdurum] 87 1.87461e-15
whsl_28002_a01r 2012 3' Seed DPA30 467bp Contig11798       PREDICTED:probablecalcium-bindingproteinCML13-like[Brachypodiumdistachyon] 227 1.52665e-57
whsl_8001_a01r 2012 3' Seed DPA30 126bp            
whsl_9001_a01r 2012 3' Seed DPA30 538bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 95 8.21431e-18
whsl_14017_a02r 2012 3' Seed DPA30 483bp Contig10329       predictedprotein[Hordeumvulgaresubsp.vulgare] 284 6.03284e-75
whsl_31017_a02r 2012 3' Seed DPA30 465bp Contig955       predictedprotein[Hordeumvulgaresubsp.vulgare] 297 7.04237e-79
whsl_32018_a02r 2012 3' Seed DPA30 435bp Contig30486       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 216 2.64338e-54
whsl_5017_a02r 2012 3' Seed DPA30 485bp       hypotheticalproteinPTT_08669[Pyrenophorateresf.teres0-1] 192 3.20211e-47
whsl_11017_a02r 2012 3' Seed DPA30 491bp       lipidtransferprotein1precursor[Triticumaestivum] 195 4.89541e-48
whsl_17018_a02r 2012 3' Seed DPA30 555bp Contig5903       predictedprotein[Hordeumvulgaresubsp.vulgare] 135 7.72306e-30
whsl_23017_a02r 2012 3' Seed DPA30 377bp       ChainA,TheCrystalStructureOfWheatNon-SpecificTransferProteinComplexedWithTwoMoleculesOfPhospholipidAt2.1AResolution 116 2.89939e-24
whsl_28018_a02r 2012 3' Seed DPA30 524bp Contig5904       predictedprotein[Hordeumvulgaresubsp.vulgare] 191 9.85368e-47
whsl_29018_a02r 2012 3' Seed DPA30 94bp Contig5904       unknown[Zeamays] 38 0.755611
whsl_7017_a02r 2012 3' Seed DPA30 200bp Contig5332       PREDICTED:40SribosomalproteinS5-1-like[Brachypodiumdistachyon] 125 6.22194e-27
whsl_14033_a03r 2012 3' Seed DPA30 536bp Contig25852       vacuolarprocessingenzyme2[Aegilopsspeltoides] 234 1.10939e-59
whsl_15033_a03r 2012 3' Seed DPA30 569bp Contig5176       RecName:Full=Ubiquitin-40SribosomalproteinS27a;Contains:RecName:Full=Ubiquitin;Contains:RecName:Full=40SribosomalproteinS27a;Flags:Precursor 317 1.53597e-84
whsl_19034_a03r 2012 3' Seed DPA30 412bp Contig3250       expansinprotein[Triticumaestivum] 133 2.25636e-29
whsl_2033_a03r 2012 3' Seed DPA30 338bp       PREDICTED:uncharacterizedproteinLOC100844536[Brachypodiumdistachyon] 94 1.15897e-17
whsl_30033_a03r 2012 3' Seed DPA30 495bp       elongationfactor-1alpha,partial[Triticumaestivum] 183 1.46723e-44
whsl_3034_a03r 2012 3' Seed DPA30 324bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 110 1.59249e-22
whsl_4033_a03r 2012 3' Seed DPA30 560bp Contig1979       cyclophilinA-1[Triticumaestivum] 236 2.55615e-60
whsl_5033_a03r 2012 3' Seed DPA30 572bp Contig5906       hypotheticalproteinOsI_15702[OryzasativaIndicaGroup] 225 6.19078e-57
whsl_6033_a03r 2012 3' Seed DPA30 505bp       hypotheticalproteinPTT_08160[Pyrenophorateresf.teres0-1] 202 3.08744e-50
whsl_17034_a03r 2012 3' Seed DPA30 496bp       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 215 4.55047e-54
whsl_20033_a03r 2012 3' Seed DPA30 463bp       expansinprotein[Triticumaestivum] 144 1.27277e-32
whsl_21033_a03r 2012 3' Seed DPA30 36bp            
whsl_22033_a03r 2012 3' Seed DPA30 529bp       plamamembraneprotein[Triticumaestivum] 129 4.70543e-28
whsl_23033_a03r 2012 3' Seed DPA30 535bp Contig17083       ATP/ADPcarrierprotein[Triticumturgidum] 195 4.37269e-48
whsl_28034_a03r 2012 3' Seed DPA30 502bp       GlydMald3-likeprotein[Glycyphagusdomesticus] 198 5.70351e-49
whsl_7033_a03r 2012 3' Seed DPA30 36bp            
whsl_9033_a03r 2012 3' Seed DPA30 545bp Contig1156       wali6[Triticumaestivum] 125 5.76631e-27
whsl_12050_a04r 2012 3' Seed DPA30 484bp Contig27226       PREDICTED:probableCCR4-associatedfactor1homolog7-like[Brachypodiumdistachyon] 284 8.08648e-75
whsl_15049_a04r 2012 3' Seed DPA30 502bp Contig5332       PREDICTED:40SribosomalproteinS5-2-like[Brachypodiumdistachyon] 222 2.81098e-56
whsl_2049_a04r 2012 3' Seed DPA30 525bp Contig18014       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 310 1.45546e-82
whsl_30049_a04r 2012 3' Seed DPA30 510bp Contig3421       Chaini,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 236 1.91141e-60
whsl_31049_a04r 2012 3' Seed DPA30 493bp       LOC100280744precursor[Zeamays] 120 2.60195e-25
whsl_32050_a04r 2012 3' Seed DPA30 472bp Contig314       PREDICTED:UDP-glucose6-dehydrogenase-like[Brachypodiumdistachyon] 170 1.68074e-40
whsl_4049_a04r 2012 3' Seed DPA30 512bp       LOC100280744precursor[Zeamays] 117 1.69008e-24
whsl_6049_a04r 2012 3' Seed DPA30 533bp       PREDICTED:uncharacterizedproteinLOC100834865[Brachypodiumdistachyon] 240 1.51509e-61
whsl_13049_a04r 2012 3' Seed DPA30 97bp Contig5907            
whsl_17050_a04r 2012 3' Seed DPA30 446bp Contig23617       predictedprotein[Hordeumvulgaresubsp.vulgare] 280 1.16298e-73
whsl_18050_a04r 2012 3' Seed DPA30 366bp Contig18331       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 187 1.00185e-45
whsl_21049_a04r 2012 3' Seed DPA30 501bp Contig7011       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 237 1.10796e-60
whsl_22049_a04r 2012 3' Seed DPA30 443bp Contig7011       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 201 6.89524e-50
whsl_23049_a04r 2012 3' Seed DPA30 428bp Contig31851       RecName:Full=Elongationfactor1-alpha;Short=EF-1-alpha 192 5.40708e-47
whsl_24049_a04r 2012 3' Seed DPA30 376bp Contig10804       glycoprotein[Humanmetapneumovirus] 42 0.069768
whsl_25050_a04r 2012 3' Seed DPA30 256bp Contig10732       hypotheticalproteinSORBIDRAFT_03g040880[Sorghumbicolor] 81 1.36139e-13
whsl_28050_a04r 2012 3' Seed DPA30 52bp Contig22704       predictedprotein[Hordeumvulgaresubsp.vulgare] 35 5.78208
whsl_8049_a04r 2012 3' Seed DPA30 441bp       hypotheticalproteinPTRG_02466[Pyrenophoratritici-repentisPt-1C-BFP] 180 2.09036e-43
whsl_15065_a05r 2012 3' Seed DPA30 483bp       highmolecularweightgluteninsubunit1Dx5.3t[Aegilopstauschii] 267 1.30175e-69
whsl_16065_a05r 2012 3' Seed DPA30 517bp Contig804       predictedprotein[Hordeumvulgaresubsp.vulgare] 176 3.21909e-42
whsl_19066_a05r 2012 3' Seed DPA30 163bp Contig19786            
whsl_2065_a05r 2012 3' Seed DPA30 584bp       alpha-gliadin[Aegilopstauschii] 307 1.01504e-81
whsl_30065_a05r 2012 3' Seed DPA30 382bp Contig14171       predictedprotein[Hordeumvulgaresubsp.vulgare] 160 2.26853e-37
whsl_3066_a05r 2012 3' Seed DPA30 488bp Contig10736       predictedprotein[Hordeumvulgaresubsp.vulgare] 273 1.42093e-71
whsl_32066_a05r 2012 3' Seed DPA30 437bp Contig22559       predictedprotein[Hordeumvulgaresubsp.vulgare] 231 7.94056e-59
whsl_4065_a05r 2012 3' Seed DPA30 343bp Contig10736       PREDICTED:40SribosomalproteinS4-like[Brachypodiumdistachyon] 164 9.08467e-39
whsl_6065_a05r 2012 3' Seed DPA30 409bp Contig3762       PREDICTED:40SribosomalproteinS28-like[Brachypodiumdistachyon] 155 5.56776e-36
whsl_11065_a05r 2012 3' Seed DPA30 501bp       lipidtransferprotein1precursor[Triticumaestivum] 205 4.66576e-51
whsl_13065_a05r 2012 3' Seed DPA30 86bp            
whsl_18066_a05r 2012 3' Seed DPA30 424bp       unknown[Lotusjaponicus] 36 3.81303
whsl_20065_a05r 2012 3' Seed DPA30 107bp Contig19786            
whsl_21065_a05r 2012 3' Seed DPA30 508bp Contig8584       ribosomalPr117,partial[Triticumaestivum] 263 1.46698e-68
whsl_22065_a05r 2012 3' Seed DPA30 453bp       GlydMald3-likeprotein[Glycyphagusdomesticus] 165 7.05988e-39
whsl_24065_a05r 2012 3' Seed DPA30 458bp Contig7310       predictedprotein[Hordeumvulgaresubsp.vulgare] 232 4.66175e-59
whsl_8065_a05r 2012 3' Seed DPA30 465bp       RecName:Full=Aldosereductase;Short=AR;AltName:Full=Aldehydereductase 215 3.53508e-54
whsl_9065_a05r 2012 3' Seed DPA30 326bp       PREDICTED:aldosereductase-like[Brachypodiumdistachyon] 146 3.40755e-33
whsl_12082_a06r 2012 3' Seed DPA30 495bp Contig8149       RecName:Full=60SribosomalproteinL30 224 7.50061e-57
whsl_14081_a06r 2012 3' Seed DPA30 496bp       LOC100280744precursor[Zeamays] 117 1.67879e-24
whsl_15081_a06r 2012 3' Seed DPA30 501bp       GlydMald3-likeprotein[Glycyphagusdomesticus] 202 3.94981e-50
whsl_16081_a06r 2012 3' Seed DPA30 505bp Contig6075       predictedprotein[Hordeumvulgaresubsp.vulgare] 211 6.64654e-53
whsl_19082_a06r 2012 3' Seed DPA30 379bp Contig9960       PREDICTED:40SribosomalproteinS5-1-like[Brachypodiumdistachyon] 129 4.32253e-28
whsl_2081_a06r 2012 3' Seed DPA30 556bp Contig19922       UDP-glucosyltransferaseHvUGT5876[Hordeumvulgaresubsp.vulgare] 300 1.84768e-79
whsl_30081_a06r 2012 3' Seed DPA30 441bp Contig11275       cyclophilinA-2[Triticumaestivum] 231 7.90661e-59
whsl_31081_a06r 2012 3' Seed DPA30 363bp Contig11275       cyclophilinA-1[Triticumaestivum] 192 4.08346e-47
whsl_11081_a06r 2012 3' Seed DPA30 524bp Contig30800       RecName:Full=Translationally-controlledtumorproteinhomolog;Short=TCTP 290 1.55864e-76
whsl_17082_a06r 2012 3' Seed DPA30 483bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 172 5.69919e-41
whsl_18082_a06r 2012 3' Seed DPA30 430bp Contig751       PREDICTED:HMG1/2-likeprotein-like[Brachypodiumdistachyon] 99 2.79638e-19
whsl_20081_a06r 2012 3' Seed DPA30 188bp Contig18736       PREDICTED:40SribosomalproteinS5-1-like[Brachypodiumdistachyon] 118 7.7056e-25
whsl_21081_a06r 2012 3' Seed DPA30 511bp Contig8584       ribosomalPr117,partial[Triticumaestivum] 247 8.29108e-64
whsl_24081_a06r 2012 3' Seed DPA30 516bp Contig34530       predictedprotein[Hordeumvulgaresubsp.vulgare] 277 1.30807e-72
whsl_26082_a06r 2012 3' Seed DPA30 468bp Contig753       aquaporin[Triticumaestivum] 190 1.5835e-46
whsl_28082_a06r 2012 3' Seed DPA30 218bp Contig9105       predictedprotein[Hordeumvulgaresubsp.vulgare] 140 1.83225e-31
whsl_7081_a06r 2012 3' Seed DPA30 75bp Contig19152            
whsl_1001_a07r 2012 3' Seed DPA30 555bp       11-beta-hydroxysteroiddehydrogenase-likeprotein[Triticumaestivum] 269 3.42676e-70
whsl_12002_a07r 2012 3' Seed DPA30 391bp Contig7511       predictedprotein[Hordeumvulgaresubsp.vulgare] 234 7.16e-60
whsl_19001_a07r 2012 3' Seed DPA30 206bp Contig5908            
whsl_3002_a07r 2012 3' Seed DPA30 152bp Contig4379       PREDICTED:extracellularmatrixprotein2-likeisoform2[Caviaporcellus] 35 6.55972
whsl_6001_a07r 2012 3' Seed DPA30 389bp Contig35124       glycinedecarboxylasePsubunit[xTritordeumsp.] 155 7.2392e-36
whsl_11001_a07r 2012 3' Seed DPA30 174bp Contig2025       PREDICTED:polyubiquitin11-like[Brachypodiumdistachyon] 49 0.000328761
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