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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 11540
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whyd_21002_a01f 2012 5' Spikelet at late flowering 356bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 133 1.74389e-29
whyd_23001_a01f 2012 5' Spikelet at late flowering 250bp       PREDICTED:uncharacterizedproteinLOC100839346[Brachypodiumdistachyon] 141 8.2333e-32
whyd_1001_a01f 2012 5' Spikelet at late flowering 533bp Contig9057       alphatubulin-2A[Triticumaestivum] 310 1.19216e-82
whyd_11001_a01f 2012 5' Spikelet at late flowering 252bp Contig35783       PREDICTED:uncharacterizedproteinLOC100826726[Brachypodiumdistachyon] 140 1.83419e-31
whyd_14001_a01f 2012 5' Spikelet at late flowering 409bp Contig9223       PREDICTED:40SribosomalproteinS3-3-like[Brachypodiumdistachyon] 222 2.85143e-56
whyd_18001_a01f 2012 5' Spikelet at late flowering 375bp Contig3227       RecName:Full=HMG1/2-likeprotein 242 2.68246e-62
whyd_19001_a01f 2012 5' Spikelet at late flowering 491bp Contig5328       predictedprotein[Hordeumvulgaresubsp.vulgare] 294 5.92898e-78
whyd_20002_a01f 2012 5' Spikelet at late flowering 489bp Contig35784       predictedprotein[Hordeumvulgaresubsp.vulgare] 323 2.04233e-86
whyd_2001_a01f 2012 5' Spikelet at late flowering 523bp Contig35785       predictedprotein[Hordeumvulgaresubsp.vulgare] 339 2.85782e-91
whyd_24002_a01f 2012 5' Spikelet at late flowering 229bp Contig8229            
whyd_25001_a01f 2012 5' Spikelet at late flowering 48bp Contig35653       PREDICTED:V-typeprotonATPasesubunitB1-like[Brachypodiumdistachyon] 34 6.66321
whyd_16002_a01f 2012 5' Spikelet at late flowering 521bp Contig3825       RecName:Full=HistoneH2A.2.2 288 4.42948e-76
whyd_22002_a01f 2012 5' Spikelet at late flowering 457bp Contig35786       predictedprotein[Hordeumvulgaresubsp.vulgare] 292 3.81256e-77
whyd_1001_a01r 2012 3' Spikelet at late flowering 437bp Contig36430       alphatubulin-2A[Triticumaestivum] 206 2.09448e-51
whyd_18002_a01r 2012 3' Spikelet at late flowering 490bp Contig36577       RecName:Full=HMG1/2-likeprotein 135 7.85199e-30
whyd_23001_a01r 2012 3' Spikelet at late flowering 191bp       PREDICTED:uncharacterizedproteinLOC100839346[Brachypodiumdistachyon] 108 7.94823e-22
whyd_11001_a01r 2012 3' Spikelet at late flowering 517bp Contig7640       PREDICTED:uncharacterizedproteinLOC100826726[Brachypodiumdistachyon] 204 1.10382e-50
whyd_13001_a01r 2012 3' Spikelet at late flowering 31bp            
whyd_14001_a01r 2012 3' Spikelet at late flowering 444bp Contig9223       predictedprotein[Hordeumvulgaresubsp.vulgare] 236 2.52612e-60
whyd_15001_a01r 2012 3' Spikelet at late flowering 385bp       proteophosphoglycanppg4[LeishmaniabraziliensisMHOM/BR/75/M2904] 31 0.0356778
whyd_16001_a01r 2012 3' Spikelet at late flowering 554bp Contig3825       RecName:Full=HistoneH2A.2.2 271 1.17776e-70
whyd_17001_a01r 2012 3' Spikelet at late flowering 429bp Contig10049       predictedprotein[Hordeumvulgaresubsp.vulgare] 98 8.10188e-19
whyd_19001_a01r 2012 3' Spikelet at late flowering 535bp Contig5328       predictedprotein[Hordeumvulgaresubsp.vulgare] 291 9.98761e-77
whyd_20002_a01r 2012 3' Spikelet at late flowering 104bp Contig35787            
whyd_2002_a01r 2012 3' Spikelet at late flowering 498bp Contig10197       predictedprotein[Hordeumvulgaresubsp.vulgare] 259 2.73528e-67
whyd_21002_a01r 2012 3' Spikelet at late flowering 561bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 191 1.2316e-46
whyd_24001_a01r 2012 3' Spikelet at late flowering 190bp Contig35788       HvB12D[Hordeumvulgaresubsp.vulgare] 52 3.97588e-05
whyd_25001_a01r 2012 3' Spikelet at late flowering 365bp Contig10944       PREDICTED:V-typeprotonATPasesubunitB1-like[Brachypodiumdistachyon] 221 8.20883e-56
whyd_7001_a01r 2012 3' Spikelet at late flowering 486bp Contig7643       PREDICTED:26Sproteaseregulatorysubunit6Ahomolog[Brachypodiumdistachyon] 236 1.93366e-60
whyd_17018_a02f 2012 5' Spikelet at late flowering 482bp Contig25921       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.18285e-54
whyd_21018_a02f 2012 5' Spikelet at late flowering 435bp Contig1200       predictedprotein[Hordeumvulgaresubsp.vulgare] 275 3.67146e-72
whyd_23017_a02f 2012 5' Spikelet at late flowering 161bp       hypotheticalproteinSORBIDRAFT_02g040700[Sorghumbicolor] 96 3.10203e-18
whyd_5018_a02f 2012 5' Spikelet at late flowering 596bp       PREDICTED:solubleinorganicpyrophosphatase-like[Brachypodiumdistachyon] 307 1.84493e-81
whyd_10017_a02f 2012 5' Spikelet at late flowering 348bp Contig4043       putativetubulinalpha-3chain[Miscanthussinensis] 245 5.43346e-63
whyd_1017_a02f 2012 5' Spikelet at late flowering 434bp Contig36294       PREDICTED:histoneH4-like[Glycinemax] 210 1.90247e-52
whyd_13017_a02f 2012 5' Spikelet at late flowering 340bp Contig9374       Chaino,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 84 1.56639e-14
whyd_14017_a02f 2012 5' Spikelet at late flowering 478bp       RecName:Full=ProteinH2A.7;AltName:Full=wcH2A-10;AltName:Full=wcH2A-4 252 3.33304e-65
whyd_19017_a02f 2012 5' Spikelet at late flowering 469bp Contig35789       histoneH4[Zeamays] 157 2.71345e-40
whyd_24018_a02f 2012 5' Spikelet at late flowering 333bp Contig1935       unnamedproteinproduct[Tetraodonnigroviridis] 42 0.0401706
whyd_26017_a02f 2012 5' Spikelet at late flowering 404bp Contig35790       PREDICTED:uncharacterizedproteinLOC100822449[Brachypodiumdistachyon] 78 6.67769e-13
whyd_27018_a02f 2012 5' Spikelet at late flowering 517bp Contig1801       predictedprotein[Hordeumvulgaresubsp.vulgare] 197 3.40166e-60
whyd_29017_a02f 2012 5' Spikelet at late flowering 507bp Contig2646       PREDICTED:eukaryotictranslationinitiationfactor3subunitH-like[Brachypodiumdistachyon] 329 2.1871e-88
whyd_16018_a02f 2012 5' Spikelet at late flowering 243bp            
whyd_22018_a02f 2012 5' Spikelet at late flowering 418bp Contig17992       PREDICTED:U5smallnuclearribonucleoprotein200kDahelicase[Brachypodiumdistachyon] 252 2.61386e-65
whyd_10017_a02r 2012 3' Spikelet at late flowering 345bp Contig4043       alpha-tubulin[Alopecurusaequalis] 154 9.69495e-36
whyd_13017_a02r 2012 3' Spikelet at late flowering 362bp Contig9374       PREDICTED:60SribosomalproteinL39-like[Brachypodiumdistachyon] 116 2.18891e-24
whyd_14017_a02r 2012 3' Spikelet at late flowering 505bp Contig4289       RecName:Full=ProteinH2A.7;AltName:Full=wcH2A-10;AltName:Full=wcH2A-4 217 1.181e-54
whyd_16017_a02r 2012 3' Spikelet at late flowering 185bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 35 8.6068
whyd_17017_a02r 2012 3' Spikelet at late flowering 513bp Contig25921       predictedprotein[Hordeumvulgaresubsp.vulgare] 206 2.83564e-51
whyd_19017_a02r 2012 3' Spikelet at late flowering 417bp Contig35789       histoneH4[Zeamays] 157 2.73409e-40
whyd_21018_a02r 2012 3' Spikelet at late flowering 505bp Contig26918       predictedprotein[Hordeumvulgaresubsp.vulgare] 241 7.83313e-62
whyd_24017_a02r 2012 3' Spikelet at late flowering 532bp Contig3362       predictedprotein[Hordeumvulgaresubsp.vulgare] 110 2.31331e-22
whyd_26017_a02r 2012 3' Spikelet at late flowering 349bp Contig35790       PREDICTED:uncharacterizedproteinLOC100822449[Brachypodiumdistachyon] 93 2.01541e-17
whyd_27017_a02r 2012 3' Spikelet at late flowering 507bp Contig1801       predictedprotein[Hordeumvulgaresubsp.vulgare] 102 2.71559e-33
whyd_29017_a02r 2012 3' Spikelet at late flowering 477bp Contig742       PREDICTED:eukaryotictranslationinitiationfactor3subunitH-like[Brachypodiumdistachyon] 260 1.59848e-67
whyd_17034_a03f 2012 5' Spikelet at late flowering 435bp Contig4726       predictedprotein[Hordeumvulgaresubsp.vulgare] 278 5.68848e-73
whyd_23033_a03f 2012 5' Spikelet at late flowering 216bp Contig35791       PREDICTED:uncharacterizedproteinLOC100835709[Brachypodiumdistachyon] 115 4.84908e-24
whyd_5034_a03f 2012 5' Spikelet at late flowering 182bp Contig25144       PREDICTED:heatshockcognateprotein80-like[Glycinemax] 114 1.40585e-23
whyd_1033_a03f 2012 5' Spikelet at late flowering 252bp       extracellulardeoxyribonuclease[MobiluncuscurtisiiATCC51333] 40 0.267233
whyd_18033_a03f 2012 5' Spikelet at late flowering 561bp Contig23037       predictedprotein[Hordeumvulgaresubsp.vulgare] 356 2.25447e-96
whyd_25033_a03f 2012 5' Spikelet at late flowering 350bp Contig13241       predictedprotein[Hordeumvulgaresubsp.vulgare] 201 6.86289e-50
whyd_26033_a03f 2012 5' Spikelet at late flowering 556bp Contig35793       predictedprotein[Hordeumvulgaresubsp.vulgare] 190 2.06188e-46
whyd_27034_a03f 2012 5' Spikelet at late flowering 424bp Contig24253       predictedprotein[Hordeumvulgaresubsp.vulgare] 279 3.3775e-73
whyd_28033_a03f 2012 5' Spikelet at late flowering 546bp Contig35792       PREDICTED:40SribosomalproteinS14-like[Brachypodiumdistachyon] 290 1.76774e-76
whyd_3033_a03f 2012 5' Spikelet at late flowering 568bp Contig10661       alphatubulin-2A[Triticumaestivum] 329 2.30079e-88
whyd_7033_a03f 2012 5' Spikelet at late flowering 498bp Contig564       predictedprotein[Hordeumvulgaresubsp.vulgare] 220 1.83899e-55
whyd_9034_a03f 2012 5' Spikelet at late flowering 529bp       PREDICTED:HEATrepeat-containingprotein5B-like[Brachypodiumdistachyon] 119 3.72834e-25
whyd_16034_a03f 2012 5' Spikelet at late flowering 487bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 212 5.10041e-53
whyd_22034_a03f 2012 5' Spikelet at late flowering 32bp            
whyd_1033_a03r 2012 3' Spikelet at late flowering 242bp            
whyd_18034_a03r 2012 3' Spikelet at late flowering 514bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 250 1.71236e-64
whyd_11033_a03r 2012 3' Spikelet at late flowering 208bp Contig26081       SNF2familyDNA-dependentATPase[Physcomitrellapatenssubsp.patens] 37 2.21378
whyd_16033_a03r 2012 3' Spikelet at late flowering 406bp Contig3563       hypotheticalproteinOsI_38995[OryzasativaIndicaGroup] 91 1.30021e-16
whyd_17033_a03r 2012 3' Spikelet at late flowering 523bp Contig4726       predictedprotein[Hordeumvulgaresubsp.vulgare] 264 7.01266e-69
whyd_25033_a03r 2012 3' Spikelet at late flowering 523bp Contig13241       predictedprotein[Hordeumvulgaresubsp.vulgare] 272 2.5751e-71
whyd_26033_a03r 2012 3' Spikelet at late flowering 550bp Contig35793       predictedprotein[Hordeumvulgaresubsp.vulgare] 61 1.81545e-07
whyd_27033_a03r 2012 3' Spikelet at late flowering 527bp Contig24253       predictedprotein[Hordeumvulgaresubsp.vulgare] 260 1.76745e-67
whyd_28033_a03r 2012 3' Spikelet at late flowering 514bp       PREDICTED:40SribosomalproteinS14-like[Brachypodiumdistachyon] 226 2.02745e-57
whyd_3034_a03r 2012 3' Spikelet at late flowering 489bp Contig36430       alphatubulin-2A[Triticumaestivum] 250 1.28817e-64
whyd_7033_a03r 2012 3' Spikelet at late flowering 406bp Contig564       predictedprotein[Hordeumvulgaresubsp.vulgare] 220 1.84824e-55
whyd_9034_a03r 2012 3' Spikelet at late flowering 458bp       LysRfamilytranscriptionalregulator[MycobacteriumcolombienseCECT3035] 36 4.90311
whyd_22033_a03r 2012 3' Spikelet at late flowering 169bp            
whyd_21050_a04f 2012 5' Spikelet at late flowering 500bp Contig3305       Pyrrolo-quinolinequinone[RhodopseudomonaspalustrisHaA2] 40 0.259607
whyd_6050_a04f 2012 5' Spikelet at late flowering 449bp Contig8959       hypotheticalproteinPANDA_018576[Ailuropodamelanoleuca] 209 3.27847e-52
whyd_10049_a04f 2012 5' Spikelet at late flowering 468bp Contig35795       predictedprotein[Hordeumvulgaresubsp.vulgare] 292 2.95877e-77
whyd_1049_a04f 2012 5' Spikelet at late flowering 610bp Contig1868       predictedprotein[Hordeumvulgaresubsp.vulgare] 291 1.09074e-76
whyd_12049_a04f 2012 5' Spikelet at late flowering 593bp Contig4035       cyclophilinA-2[Triticumaestivum] 259 5.67315e-67
whyd_13049_a04f 2012 5' Spikelet at late flowering 506bp Contig879       predictedprotein[Hordeumvulgaresubsp.vulgare] 316 1.91599e-84
whyd_14049_a04f 2012 5' Spikelet at late flowering 533bp Contig12832       PREDICTED:heatshockcognate70kDaprotein2-like[Brachypodiumdistachyon] 353 2.09462e-95
whyd_15049_a04f 2012 5' Spikelet at late flowering 449bp Contig35794       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 4.7341e-51
whyd_18049_a04f 2012 5' Spikelet at late flowering 536bp Contig127       predictedprotein[Hordeumvulgaresubsp.vulgare] 345 4.46249e-93
whyd_2049_a04f 2012 5' Spikelet at late flowering 581bp Contig2467       RecName:Full=HistoneH2A.2.1 288 6.26809e-76
whyd_24050_a04f 2012 5' Spikelet at late flowering 205bp Contig26843       predictedprotein[Hordeumvulgaresubsp.vulgare] 135 7.80102e-30
whyd_29049_a04f 2012 5' Spikelet at late flowering 537bp Contig10661       alphatubulin-2A[Triticumaestivum] 327 9.83389e-88
whyd_3049_a04f 2012 5' Spikelet at late flowering 573bp Contig36528       predictedprotein[Hordeumvulgaresubsp.vulgare] 397 9.10193e-109
whyd_7049_a04f 2012 5' Spikelet at late flowering 460bp Contig821       PREDICTED:60SribosomalproteinL27a-3-like[Brachypodiumdistachyon] 217 3.62842e-71
whyd_8049_a04f 2012 5' Spikelet at late flowering 516bp Contig4728       predictedprotein[Hordeumvulgaresubsp.vulgare] 312 2.15112e-83
whyd_16050_a04f 2012 5' Spikelet at late flowering 435bp Contig30183       predictedprotein[Hordeumvulgaresubsp.vulgare] 155 4.25798e-36
whyd_22050_a04f 2012 5' Spikelet at late flowering 445bp Contig8820       RecName:Full=Elongationfactor1-beta;Short=EF-1-beta;AltName:Full=Elongationfactor1-beta';Short=EF-1-beta';AltName:Full=Elongationfactor1B-alpha2;AltName:Full=eEF-1Balpha2 284 1.05641e-74
whyd_1049_a04r 2012 3' Spikelet at late flowering 336bp Contig5993       predictedprotein[Hordeumvulgaresubsp.vulgare] 96 2.34412e-18
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