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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 4848
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whsp_10015_a01r 2012 3' 729bp       PREDICTED:uncharacterizedproteinLOC100827317[Brachypodiumdistachyon] 199 8.58525e-49
whsp_1015_a01r 2012 3' 600bp Contig890       RecName:Full=UTP--glucose-1-phosphateuridylyltransferase;AltName:Full=UDP-glucosepyrophosphorylase;Short=UDPGP;Short=UGPase 241 1.23734e-61
whsp_11015_a01r 2012 3' 608bp       PREDICTED:uncharacterizedproteinAt3g03773-likeisoform1[Brachypodiumdistachyon] 271 1.16806e-70
whsp_12015_a01r 2012 3' 629bp       hypotheticalproteinDAPPUDRAFT_304724[Daphniapulex] 117 2.38075e-24
whsp_15015_a01r 2012 3' 549bp Contig37015       predictedprotein[Hordeumvulgaresubsp.vulgare] 262 4.02781e-68
whsp_17015_a01r 2012 3' 535bp Contig6129       PREDICTED:acyl-CoA-bindingprotein-like[Brachypodiumdistachyon] 161 1.19356e-37
whsp_18015_a01r 2012 3' 544bp Contig7088       aquaporin[Hordeumvulgare] 171 1.20246e-40
whsp_4015_a01r 2012 3' 396bp Contig12866       predictedprotein[Hordeumvulgaresubsp.vulgare] 105 6.71686e-21
whsp_5015_a01r 2012 3' 577bp Contig30301       predictedprotein[Hordeumvulgaresubsp.vulgare] 253 2.86976e-65
whsp_6015_a01r 2012 3' 88bp Contig6310       PREDICTED:translocon-associatedproteinsubunitalpha-like[Brachypodiumdistachyon] 65 5.80638e-09
whsp_7015_a01r 2012 3' 692bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 376 2.70266e-102
whsp_8015_a01r 2012 3' 721bp Contig29320       predictedprotein[Hordeumvulgaresubsp.vulgare] 292 7.23869e-77
whsp_9015_a01r 2012 3' 697bp Contig9088       predictedprotein[Hordeumvulgaresubsp.vulgare] 346 3.0588e-93
whsp_11015_a02r 2012 3' 77bp Contig4289            
whsp_12015_a02r 2012 3' 590bp Contig36281       predictedprotein[Hordeumvulgaresubsp.vulgare] 328 9.78923e-88
whsp_14015_a02r 2012 3' 65bp Contig7759            
whsp_16015_a02r 2012 3' 518bp Contig5729       hypotheticalproteinOsI_06649[OryzasativaIndicaGroup] 270 1.25418e-70
whsp_20015_a02r 2012 3' 639bp Contig5166       predictedprotein[Hordeumvulgaresubsp.vulgare] 288 1.04057e-75
whsp_4015_a02r 2012 3' 560bp Contig20373       predictedprotein[Hordeumvulgaresubsp.vulgare] 354 1.09854e-95
whsp_5015_a02r 2012 3' 671bp Contig6130       hypotheticalproteinOsI_27060[OryzasativaIndicaGroup] 114 2.3155e-23
whsp_8015_a02r 2012 3' 532bp Contig18054       PREDICTED:uncharacterizedproteinLOC100845483[Brachypodiumdistachyon] 171 8.64322e-41
whsp_10016_a03r 2012 3' 765bp       91Aprotein,partial[Triticumaestivum] 357 2.70826e-96
whsp_1016_a03r 2012 3' 462bp Contig17815       S28ribosomalprotein,partial[Triticumaestivum] 165 5.33501e-39
whsp_11016_a03r 2012 3' 633bp Contig2932       predictedprotein[Hordeumvulgaresubsp.vulgare] 287 2.25794e-75
whsp_12016_a03r 2012 3' 599bp Contig3215       predictedprotein[Hordeumvulgaresubsp.vulgare] 373 2.72472e-101
whsp_14016_a03r 2012 3' 560bp       predictedprotein[MicromonaspusillaCCMP1545] 45 0.0109152
whsp_15016_a03r 2012 3' 573bp       Indolesynthase[Triticumaestivum] 267 1.88792e-69
whsp_16016_a03r 2012 3' 566bp Contig1970       predictedprotein[Hordeumvulgaresubsp.vulgare] 208 5.91914e-52
whsp_3016_a03r 2012 3' 460bp Contig19104       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.18302e-54
whsp_5016_a03r 2012 3' 569bp Contig17248       predictedprotein[Hordeumvulgaresubsp.vulgare] 267 1.39568e-69
whsp_8016_a03r 2012 3' 710bp Contig4431       PREDICTED:elongationfactor1-gamma2-like[Brachypodiumdistachyon] 387 2.12733e-105
whsp_1016_a04r 2012 3' 621bp       PREDICTED:PHDfingerproteinAt1g33420-like[Brachypodiumdistachyon] 361 9.0874e-98
whsp_11016_a04r 2012 3' 36bp            
whsp_12016_a04r 2012 3' 604bp Contig4167       predictedprotein[Hordeumvulgaresubsp.vulgare] 319 3.68514e-85
whsp_13016_a04r 2012 3' 495bp       GJ13976[Drosophilavirilis] 39 0.446925
whsp_15016_a04r 2012 3' 619bp       PREDICTED:serinecarboxypeptidaseII-1-like[Brachypodiumdistachyon] 287 1.2769e-75
whsp_17016_a04r 2012 3' 31bp            
whsp_18016_a04r 2012 3' 459bp Contig6308       PREDICTED:40SribosomalproteinS21-like[Brachypodiumdistachyon] 162 3.4733e-38
whsp_20016_a04r 2012 3' 647bp       Os02g0492500[OryzasativaJaponicaGroup] 183 4.89814e-44
whsp_3016_a04r 2012 3' 465bp Contig19104       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.21499e-54
whsp_6016_a04r 2012 3' 406bp Contig4899       predictedprotein[Hordeumvulgaresubsp.vulgare] 270 1.19736e-70
whsp_8016_a04r 2012 3' 645bp Contig1979       cyclophilinA-1[Triticumaestivum] 326 2.70861e-87
whsp_9016_a04r 2012 3' 274bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 62 4.92368e-08
whsp_10031_a05r 2012 3' 60bp Contig2710       putativechlorophyllA-BbindingproteintypeI[Cupressussempervirens] 39 0.360697
whsp_11031_a05r 2012 3' 99bp            
whsp_12031_a05r 2012 3' 425bp Contig7933       fructose-bisphosphatealdolase[Triticumaestivum] 150 1.81179e-34
whsp_16031_a05r 2012 3' 289bp       PREDICTED:lysine-specificdemethylaseREF6-like[Brachypodiumdistachyon] 49 0.000571829
whsp_17031_a05r 2012 3' 169bp Contig13100       predictedprotein[PostiaplacentaMad-698-R] 38 0.9962
whsp_18031_a05r 2012 3' 301bp Contig1096       RRNAintron-encodedhomingendonuclease[Medicagotruncatula] 158 6.59609e-37
whsp_3031_a05r 2012 3' 619bp       PREDICTED:translocaseofchloroplast34,chloroplastic-like[Brachypodiumdistachyon] 293 2.32705e-77
whsp_4031_a05r 2012 3' 584bp Contig3359       predictedprotein[Hordeumvulgaresubsp.vulgare] 324 1.04797e-86
whsp_5031_a05r 2012 3' 136bp       unknown[Lotusjaponicus] 87 1.42261e-15
whsp_6031_a05r 2012 3' 397bp Contig28372       predictedprotein[Hordeumvulgaresubsp.vulgare] 106 2.30855e-21
whsp_8031_a05r 2012 3' 724bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 374 1.47683e-101
whsp_9031_a05r 2012 3' 695bp Contig9861       60SribosomalproteinL5[Triticumaestivum] 337 2.39839e-90
whsp_10031_a06r 2012 3' 524bp Contig6606       RecName:Full=RuBisCOlargesubunit-bindingproteinsubunitalpha,chloroplastic;AltName:Full=60kDachaperoninsubunitalpha;AltName:Full=CPN-60alpha;Flags:Precursor 222 5.21277e-56
whsp_11031_a06r 2012 3' 504bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 187 1.0021e-45
whsp_12031_a06r 2012 3' 584bp Contig36558       predictedprotein[Hordeumvulgaresubsp.vulgare] 299 3.61018e-79
whsp_13031_a06r 2012 3' 625bp Contig26097       PREDICTED:polyadenylate-bindingprotein2-like[Brachypodiumdistachyon] 314 1.29163e-83
whsp_14031_a06r 2012 3' 550bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 285 4.44295e-75
whsp_16031_a06r 2012 3' 287bp       PREDICTED:lysine-specificdemethylaseREF6-like[Brachypodiumdistachyon] 49 0.000573887
whsp_18031_a06r 2012 3' 680bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 82 1.00872e-13
whsp_20031_a06r 2012 3' 650bp Contig36202       predictedprotein[Hordeumvulgaresubsp.vulgare] 292 7.58055e-77
whsp_2031_a06r 2012 3' 492bp Contig26905       predictedprotein[Hordeumvulgaresubsp.vulgare] 171 7.57008e-41
whsp_3031_a06r 2012 3' 573bp       PREDICTED:translocaseofchloroplast34,chloroplastic-like[Brachypodiumdistachyon] 267 1.88792e-69
whsp_4031_a06r 2012 3' 573bp Contig3359       predictedprotein[Hordeumvulgaresubsp.vulgare] 325 4.39565e-87
whsp_5031_a06r 2012 3' 568bp Contig21873       reversiblyglycosylatedpolypeptide[Triticumaestivum] 292 3.10205e-77
whsp_6031_a06r 2012 3' 637bp Contig9090       predictedprotein[Hordeumvulgaresubsp.vulgare] 235 8.00443e-60
whsp_7031_a06r 2012 3' 708bp Contig10620       predictedprotein[Hordeumvulgaresubsp.vulgare] 289 4.57611e-76
whsp_8031_a06r 2012 3' 671bp Contig2293       RecName:Full=60SribosomalproteinL24 325 6.61323e-87
whsp_9031_a06r 2012 3' 519bp Contig32954       PREDICTED:stomatin-likeprotein2-like[Brachypodiumdistachyon] 66 3.59229e-09
whsp_10032_a07r 2012 3' 278bp Contig13385       proteinphosphatase2Astructuralsubunit[Triticumaestivum] 150 1.36502e-34
whsp_12032_a07r 2012 3' 618bp Contig24253       predictedprotein[Hordeumvulgaresubsp.vulgare] 329 3.77368e-88
whsp_13032_a07r 2012 3' 377bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 64 1.00114e-08
whsp_15032_a07r 2012 3' 194bp       novelproteinsimilartoMAP/microtubuleaffinity-regulatingkinaseproteinfamily[Daniorerio] 37 1.71742
whsp_16032_a07r 2012 3' 542bp Contig21487       predictedprotein[Hordeumvulgaresubsp.vulgare] 203 2.18632e-50
whsp_17032_a07r 2012 3' 112bp       60SribosomalproteinL5[Triticumaestivum] 70 2.40824e-10
whsp_18032_a07r 2012 3' 331bp Contig11974       predictedprotein[Hordeumvulgaresubsp.vulgare] 81 1.33612e-13
whsp_20032_a07r 2012 3' 607bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 54 2.93092e-05
whsp_2032_a07r 2012 3' 560bp       PREDICTED:uncharacterizedproteinLOC100838550[Brachypodiumdistachyon] 190 1.60852e-46
whsp_3032_a07r 2012 3' 511bp       hypotheticalproteinOsJ_35848[OryzasativaJaponicaGroup] 111 1.21119e-22
whsp_4032_a07r 2012 3' 269bp Contig29018       predictedprotein[Hordeumvulgaresubsp.vulgare] 55 6.04007e-06
whsp_6032_a07r 2012 3' 398bp Contig10914       PREDICTED:60SribosomalproteinL38-like[Brachypodiumdistachyon] 140 1.44263e-31
whsp_8032_a07r 2012 3' 689bp Contig30800       RecName:Full=Translationally-controlledtumorproteinhomolog;Short=TCTP 344 1.12602e-92
whsp_9032_a07r 2012 3' 212bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 121 8.86658e-26
whsp_10032_a08r 2012 3' 764bp Contig167       GH17073[Drosophilagrimshawi] 41 0.429616
whsp_1032_a08r 2012 3' 601bp Contig12853       predictedprotein[Hordeumvulgaresubsp.vulgare] 221 1.03016e-55
whsp_11032_a08r 2012 3' 632bp Contig11925       putativegda-1[Triticumurartu] 188 1.42747e-45
whsp_12032_a08r 2012 3' 575bp Contig7110       predictedprotein[Hordeumvulgaresubsp.vulgare] 264 1.59822e-68
whsp_13032_a08r 2012 3' 360bp       heatshockprotein90[Triticumaestivum] 145 7.53509e-33
whsp_14032_a08r 2012 3' 565bp       PREDICTED:monoglyceridelipase-likeisoform2[Brachypodiumdistachyon] 223 2.32224e-56
whsp_15032_a08r 2012 3' 578bp Contig30486       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 294 1.12328e-77
whsp_16032_a08r 2012 3' 551bp Contig9084       unnamedproteinproduct[Zeamays] 193 1.79452e-47
whsp_18032_a08r 2012 3' 553bp Contig6131       PREDICTED:uncharacterizedproteinLOC100844245[Brachypodiumdistachyon] 131 1.4285e-28
whsp_20032_a08r 2012 3' 537bp Contig6257       Ran-relatedGTP-bindingprotein[Festucaarundinacea] 240 1.54803e-61
whsp_3032_a08r 2012 3' 619bp Contig4043       alpha-tubulin[Alopecurusaequalis] 359 3.45321e-97
whsp_4032_a08r 2012 3' 293bp Contig6196       Os07g0139600[OryzasativaJaponicaGroup] 59 4.21572e-07
whsp_6032_a08r 2012 3' 398bp Contig10914       PREDICTED:60SribosomalproteinL38-like[Brachypodiumdistachyon] 140 1.44263e-31
whsp_7032_a08r 2012 3' 789bp Contig22437       predictedprotein[Hordeumvulgaresubsp.vulgare] 416 5.25157e-114
whsp_8032_a08r 2012 3' 746bp Contig23768       cytosolicCu/Znsuperoxidedismutase[Triticumaestivum] 318 1.75084e-84
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