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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 9869
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whdl_4002_a01r 2012 3' Crown of seedling 172bp Contig36208       hypotheticalproteinBACEGG_02117[BacteroideseggerthiiDSM20697] 39 0.444333
whdl_20001_a01f 2012 5' Crown of seedling 587bp Contig4726       predictedprotein[Hordeumvulgaresubsp.vulgare] 361 6.02028e-98
whdl_21001_a01f 2012 5' Crown of seedling 45bp Contig10085            
whdl_1001_a01f 2012 5' Crown of seedling 391bp       PREDICTED:uncharacterizedproteinLOC100831207[Brachypodiumdistachyon] 48 0.000950431
whdl_11001_a01f 2012 5' Crown of seedling 397bp Contig12983       PREDICTED:prefoldinsubunit6-like[Brachypodiumdistachyon] 96 4.09155e-18
whdl_13001_a01f 2012 5' Crown of seedling 307bp Contig36294       PREDICTED:histoneH4-like[Glycinemax] 197 1.27199e-48
whdl_14001_a01f 2012 5' Crown of seedling 425bp Contig8655       putativeelongationfactor1beta[Hordeumvulgaresubsp.vulgare] 240 1.73866e-61
whdl_2001_a01f 2012 5' Crown of seedling 395bp       mitochondrialATPsynthaseprecursor[Triticumaestivum] 178 8.18703e-43
whdl_2002_a01f 2012 5' Crown of seedling 355bp       mitochondrialATPsynthaseprecursor[Triticumaestivum] 67 2.00454e-09
whdl_23002_a01f 2012 5' Crown of seedling 332bp       PREDICTED:abscisicstress-ripeningprotein3-like[Brachypodiumdistachyon] 145 5.76883e-33
whdl_24002_a01f 2012 5' Crown of seedling 386bp Contig9367       PREDICTED:NADHdehydrogenase[ubiquinone]1betasubcomplexsubunit10-B-like[Brachypodiumdistachyon] 228 5.17278e-58
whdl_26001_a01f 2012 5' Crown of seedling 523bp Contig783       predictedprotein[Hordeumvulgaresubsp.vulgare] 215 4.879e-54
whdl_3001_a01f 2012 5' Crown of seedling 373bp Contig331       Chaint,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 211 6.64876e-53
whdl_4001_a01f 2012 5' Crown of seedling 391bp Contig36208       Os11g0211800[OryzasativaJaponicaGroup] 172 4.36402e-41
whdl_11001_a01r 2012 3' Crown of seedling 81bp Contig8664            
whdl_21001_a01r 2012 3' Crown of seedling 527bp       RecName:Full=HistoneH2B.2 232 3.02181e-59
whdl_5001_a01r 2012 3' Crown of seedling 433bp Contig1832       PREDICTED:histoneH2B.5-likeisoform1[Brachypodiumdistachyon] 203 1.78066e-50
whdl_6001_a01r 2012 3' Crown of seedling 515bp Contig32504       Os07g0150200[OryzasativaJaponicaGroup] 236 2.55878e-60
whdl_1001_a01r 2012 3' Crown of seedling 170bp Contig29294            
whdl_14001_a01r 2012 3' Crown of seedling 398bp Contig8231       putativeelongationfactor1beta[Hordeumvulgaresubsp.vulgare] 207 1.25505e-51
whdl_16001_a01r 2012 3' Crown of seedling 368bp Contig10002       predictedprotein[Hordeumvulgaresubsp.vulgare] 151 6.0921e-35
whdl_20001_a01r 2012 3' Crown of seedling 195bp Contig4726       predictedprotein[Hordeumvulgaresubsp.vulgare] 114 1.10548e-23
whdl_24002_a01r 2012 3' Crown of seedling 550bp Contig9367       PREDICTED:NADHdehydrogenase[ubiquinone]1betasubcomplexsubunit10-B-like[Brachypodiumdistachyon] 228 6.57435e-58
whdl_26001_a01r 2012 3' Crown of seedling 432bp Contig783       predictedprotein[Hordeumvulgaresubsp.vulgare] 215 4.5282e-54
whdl_3002_a01r 2012 3' Crown of seedling 366bp       Chaint,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 151 6.1161e-35
whdl_4018_a02r 2012 3' Crown of seedling 66bp Contig8997            
whdl_9017_a02f 2012 5' Crown of seedling 229bp Contig35       PREDICTED:CHD3-typechromatin-remodelingfactorPICKLE-like[Brachypodiumdistachyon] 121 6.9145e-26
whdl_1017_a02f 2012 5' Crown of seedling 401bp Contig6061       elongationfactor1alpha[Hordeumbrevisubulatum] 269 2.05077e-70
whdl_13017_a02f 2012 5' Crown of seedling 489bp Contig2272       ChainK,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 289 1.90729e-76
whdl_18017_a02f 2012 5' Crown of seedling 626bp       PREDICTED:ATP-citratesynthasebetachainprotein1-like[Brachypodiumdistachyon] 386 2.07588e-105
whdl_2018_a02f 2012 5' Crown of seedling 336bp       hypotheticalproteinOsJ_11897[OryzasativaJaponicaGroup] 52 6.62138e-05
whdl_23018_a02f 2012 5' Crown of seedling 298bp Contig11304       PREDICTED:cytochromeb5-like[Brachypodiumdistachyon] 161 1.02135e-37
whdl_24018_a02f 2012 5' Crown of seedling 325bp Contig15462       PREDICTED:heatshockcognate70kDaprotein-like[Brachypodiumdistachyon] 187 1.02124e-45
whdl_25017_a02f 2012 5' Crown of seedling 550bp Contig355       predictedprotein[Hordeumvulgaresubsp.vulgare] 349 2.50537e-94
whdl_4017_a02f 2012 5' Crown of seedling 158bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 94 9.05401e-18
whdl_5017_a02f 2012 5' Crown of seedling 388bp Contig373       Os07g0139600[OryzasativaJaponicaGroup] 57 2.05435e-06
whdl_6017_a02f 2012 5' Crown of seedling 450bp       dolichyl-diphosphooligosaccharide--proteinglycosyltransferase,putative,expressed[Triticumaestivum] 286 2.11031e-75
whdl_8017_a02f 2012 5' Crown of seedling 288bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 86 4.23634e-15
whdl_6017_a02r 2012 3' Crown of seedling 484bp Contig3224       dolichyl-diphosphooligosaccharide--proteinglycosyltransferase,putative,expressed[Triticumaestivum] 164 1.21963e-38
whdl_1017_a02r 2012 3' Crown of seedling 417bp Contig11863       elongationfactor-1alpha,partial[Triticumaestivum] 178 4.66359e-43
whdl_12017_a02r 2012 3' Crown of seedling 438bp Contig8187       trehalosesynthase,putative,expressed[Triticumaestivum] 46 0.0027738
whdl_13017_a02r 2012 3' Crown of seedling 498bp Contig2272       ChainK,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 237 8.52263e-61
whdl_14017_a02r 2012 3' Crown of seedling 414bp Contig6168       PREDICTED:histoneH4-like[Glycinemax] 205 4.65278e-51
whdl_18017_a02r 2012 3' Crown of seedling 512bp       PREDICTED:ATP-citratesynthasebetachainprotein1-like[Brachypodiumdistachyon] 161 5.98327e-38
whdl_22017_a02r 2012 3' Crown of seedling 566bp       PREDICTED:uncharacterizedproteinLOC100844407[Brachypodiumdistachyon] 239 3.13133e-61
whdl_23018_a02r 2012 3' Crown of seedling 241bp Contig11304            
whdl_24018_a02r 2012 3' Crown of seedling 492bp Contig29516       CytHSP70[Triticumaestivum] 269 2.04249e-70
whdl_25017_a02r 2012 3' Crown of seedling 492bp Contig355       predictedprotein[Hordeumvulgaresubsp.vulgare] 272 3.13672e-71
whdl_16033_a03f 2012 5' Crown of seedling 257bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 71 1.40881e-10
whdl_20033_a03f 2012 5' Crown of seedling 587bp       hypotheticalproteinSORBIDRAFT_08g016570[Sorghumbicolor] 222 5.70053e-56
whdl_21033_a03f 2012 5' Crown of seedling 580bp Contig336       predictedprotein[Hordeumvulgaresubsp.vulgare] 328 5.37461e-88
whdl_1033_a03f 2012 5' Crown of seedling 416bp Contig3200       RecName:Full=70kDapeptidyl-prolylisomerase;AltName:Full=Peptidyl-prolylcis-transisomerase;Short=PPIase;AltName:Full=Rotamase 269 3.42665e-70
whdl_12033_a03f 2012 5' Crown of seedling 572bp Contig6148       cyc07[Triticumaestivum] 329 3.9757e-88
whdl_13033_a03f 2012 5' Crown of seedling 574bp Contig5055       predictedprotein[Hordeumvulgaresubsp.vulgare] 336 2.49022e-90
whdl_14033_a03f 2012 5' Crown of seedling 507bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 219 4.16313e-55
whdl_17033_a03f 2012 5' Crown of seedling 265bp Contig122       predictedprotein[Hordeumvulgaresubsp.vulgare] 78 5.14851e-28
whdl_18033_a03f 2012 5' Crown of seedling 444bp Contig338       predictedprotein[Hordeumvulgaresubsp.vulgare] 294 5.98475e-78
whdl_19033_a03f 2012 5' Crown of seedling 228bp Contig12266       RecName:Full=DehydrinCOR410;AltName:Full=Cold-inducedCOR410protein 109 2.72824e-22
whdl_23034_a03f 2012 5' Crown of seedling 489bp       PREDICTED:shikimatekinase,chloroplastic-like[Brachypodiumdistachyon] 252 4.42736e-65
whdl_26033_a03f 2012 5' Crown of seedling 565bp Contig614       reversiblyglycosylatedpolypeptide[Triticumaestivum] 390 1.09832e-106
whdl_5033_a03f 2012 5' Crown of seedling 431bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 284 1.0411e-74
whdl_7033_a03f 2012 5' Crown of seedling 210bp Contig3306       PREDICTED:T-complexprotein1subunitzeta-like[Glycinemax] 130 2.50122e-28
whdl_8033_a03f 2012 5' Crown of seedling 288bp Contig6061       elongationfactor1alpha[Hordeumbrevisubulatum] 196 2.90667e-48
whdl_5033_a03r 2012 3' Crown of seedling 502bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 221 8.21677e-56
whdl_7033_a03r 2012 3' Crown of seedling 553bp Contig3307       PREDICTED:T-complexprotein1subunitzeta-like[Brachypodiumdistachyon] 256 2.29854e-66
whdl_1033_a03r 2012 3' Crown of seedling 287bp       RecName:Full=70kDapeptidyl-prolylisomerase;AltName:Full=Peptidyl-prolylcis-transisomerase;Short=PPIase;AltName:Full=Rotamase 62 5.01585e-08
whdl_12033_a03r 2012 3' Crown of seedling 592bp Contig28346       PREDICTED:40SribosomalproteinS3a-like[Brachypodiumdistachyon] 272 6.47588e-71
whdl_13033_a03r 2012 3' Crown of seedling 479bp Contig25358       predictedprotein[Hordeumvulgaresubsp.vulgare] 191 6.98212e-47
whdl_14033_a03r 2012 3' Crown of seedling 544bp Contig337       PREDICTED:uncharacterizedproteinLOC100831688[Brachypodiumdistachyon] 84 1.92404e-14
whdl_16033_a03r 2012 3' Crown of seedling 119bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 46 0.00282568
whdl_17033_a03r 2012 3' Crown of seedling 251bp Contig122       60SribosomalproteinL18-likeprotein[Miscanthussinensis] 71 8.01168e-11
whdl_18033_a03r 2012 3' Crown of seedling 532bp Contig338       predictedprotein[Hordeumvulgaresubsp.vulgare] 99 5.45157e-19
whdl_19033_a03r 2012 3' Crown of seedling 556bp Contig12266       RecName:Full=DehydrinCOR410;AltName:Full=Cold-inducedCOR410protein 273 2.37311e-71
whdl_20033_a03r 2012 3' Crown of seedling 190bp Contig6053            
whdl_22033_a03r 2012 3' Crown of seedling 360bp Contig339       PREDICTED:transcriptionfactorBTF3-likeisoform1[Brachypodiumdistachyon] 59 4.1473e-07
whdl_23034_a03r 2012 3' Crown of seedling 494bp       PREDICTED:shikimatekinase,chloroplastic-like[Brachypodiumdistachyon] 142 4.8957e-32
whdl_26033_a03r 2012 3' Crown of seedling 503bp Contig570       reversiblyglycosylatedpolypeptide[Triticumaestivum] 283 1.34187e-74
whdl_8033_a03r 2012 3' Crown of seedling 547bp Contig11863       elongationfactor-1alpha,partial[Triticumaestivum] 253 1.87099e-65
whdl_15049_a04f 2012 5' Crown of seedling 40bp Contig70            
whdl_16049_a04f 2012 5' Crown of seedling 336bp       predictedprotein[Hordeumvulgaresubsp.vulgare] 176 9.06236e-51
whdl_20049_a04f 2012 5' Crown of seedling 450bp Contig698       PREDICTED:uncharacterizedproteinLOC100828544[Brachypodiumdistachyon] 292 2.25467e-77
whdl_11049_a04f 2012 5' Crown of seedling 293bp       PREDICTED:UDP-glucuronate4-epimerase1-like[Brachypodiumdistachyon] 98 1.06957e-18
whdl_12049_a04f 2012 5' Crown of seedling 429bp Contig23497       predictedprotein[Hordeumvulgaresubsp.vulgare] 174 1.16672e-41
whdl_13049_a04f 2012 5' Crown of seedling 406bp Contig9084       RecName:Full=ADP,ATPcarrierprotein1,mitochondrial;AltName:Full=ADP/ATPtranslocase1;AltName:Full=Adeninenucleotidetranslocator1;Short=ANT1;Flags:Precursor 164 1.20357e-38
whdl_14049_a04f 2012 5' Crown of seedling 437bp Contig187       predictedprotein[Hordeumvulgaresubsp.vulgare] 291 8.4445e-77
whdl_17049_a04f 2012 5' Crown of seedling 598bp Contig1638       PREDICTED:smallnuclearribonucleoproteinSmD3-like[Brachypodiumdistachyon] 264 1.04504e-68
whdl_19049_a04f 2012 5' Crown of seedling 67bp       60SribosomalproteinL31B[Heveabrasiliensis] 40 0.222034
whdl_22049_a04f 2012 5' Crown of seedling 544bp Contig9033       PREDICTED:proteinmagonashihomolog[Brachypodiumdistachyon] 326 2.2364e-87
whdl_23050_a04f 2012 5' Crown of seedling 234bp Contig37067       PREDICTED:macrodomain-containingproteinVPA0103-like[Brachypodiumdistachyon] 143 2.88852e-32
whdl_3049_a04f 2012 5' Crown of seedling 378bp       PREDICTED:proteasomesubunitbetatype-3-like[Brachypodiumdistachyon] 203 1.38087e-50
whdl_6049_a04f 2012 5' Crown of seedling 440bp Contig3783       unnamedproteinproduct[Vitisvinifera] 307 6.64694e-82
whdl_8049_a04f 2012 5' Crown of seedling 477bp Contig8873       predictedprotein[Hordeumvulgaresubsp.vulgare] 326 2.38275e-87
whdl_6049_a04r 2012 3' Crown of seedling 490bp Contig4042       beta-tubulin2[Hordeumvulgaresubsp.vulgare] 197 1.28827e-48
whdl_9049_a04r 2012 3' Crown of seedling 149bp Contig22987       hypotheticalprotein[MonosigabrevicollisMX1] 44 0.018501
whdl_12049_a04r 2012 3' Crown of seedling 526bp Contig23497       predictedprotein[Hordeumvulgaresubsp.vulgare] 191 1.00828e-46
whdl_13049_a04r 2012 3' Crown of seedling 430bp Contig9084       RecName:Full=ADP,ATPcarrierprotein1,mitochondrial;AltName:Full=ADP/ATPtranslocase1;AltName:Full=Adeninenucleotidetranslocator1;Short=ANT1;Flags:Precursor 107 1.74415e-21
whdl_14049_a04r 2012 3' Crown of seedling 108bp            
whdl_15049_a04r 2012 3' Crown of seedling 43bp            
whdl_16049_a04r 2012 3' Crown of seedling 542bp Contig31319       predictedprotein[Hordeumvulgaresubsp.vulgare] 202 3.7293e-50
whdl_17049_a04r 2012 3' Crown of seedling 522bp Contig9739       PREDICTED:smallnuclearribonucleoproteinSmD3-like[Brachypodiumdistachyon] 216 2.13915e-54
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