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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_DPA20_all.Contig1683
Contig Information
Length 902 bp
Tissue Seed DPA20
Clones 3 Clones [Download: CSV  ,  FASTA ]
whdp6l08    rwhdp6l08    rwhdp11e14   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os01g0848200 [Oryza sativa (japonica cultivar-group)] >gi|15408889|dbj|BAB64280.1| putative delta-1-pyrroline-5-carboxylate synthetase [Oryza sativa Japonica Group] >gi|113534333|dbj|BAF06716.1| Os01g0848200 [Oryza sativa (japonica cultivar-group)] >gi|215715215|dbj|BAG94966.1| unnamed protein product [Oryza sativa Japonica Group] >gi|218189375|gb|EEC71802.1| hypothetical protein OsI_04432 [Oryza sativa Indica Group]
Score 948
Evalue 1.44845e-100
Total Hit Count 500
Registered year 2003
Contig Sequence     [ Download ]
>Wh_DPA20_all.Contig1683
GATGTACCGATGCAATTCTACAGTTACAACAACTAGTGCCATAACTACGACATTGTATGGATAAATCATTGTACACGAACAATCACGGAACTAGATAGCG
ACATAGTAACAACAATGCTCTCTTGTCTTCCTTCATTCCTCGCACAGAGAGAAGGGGGGCTTTGAAGAGGATTCTTCTACAAAAATTGCTCTACAGCAGG
AATCCTCTACCTGCAAACATAGTAACAACAATGCTCTCTTGTCTTCCTTCATTCCTCGCACAGAGAGAAGGGGGGCTTTGAAGAGGATTCTTCTACAAAA
ATTGCTCTACAGCAGGAATCCTCTACCCTCATTGCAAAGGAAGATCCTTGTGGGTGTACACAACTCCCTTGTCGCCGTTCACTACTTGTCCACTCCCTCG
CAGAATGCACCGAGTGGTTAAAAGACCGTCGACGCCAACAGGTCCACGAGCATGTATGCGCCCTGTACTTATGCCAACCTCTGCACCTAGACCGAAGCGA
GTCCCATCACAGAACCTTGTGCTTGCATTATGGAACACAGCAGCACTGTCAACTTGTTGTAGAAAAGTATCTGCTGACTTCTTATCAGTTGTGATAATAC
AATCTGTGTGTGCACTTCCATAACGATTGATATGGTCAATCGCTGACTGCACATCATCAACAAATTCGAGGGTGCATGCCATTGAGCTATACTCATGATG
AAATGAATCTACCTTTGGTACTTTCAGTGTGTCATGTGCGACAGGCCCACCATAAATAACAACTCCTTCTTTCGCAAGTTCCATCAATAAATCATCAAGA
CCCTCTGTCTTGTTCAGATCTTTATGAACAAGTAGTGTTTCCATAGCATTACACGCTGCAGGATAATCAACCTTTGCATCCAATACGATACGTTTTGCCA
TG
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