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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_VWD_all.Contig1853
Contig Information
Length 1170 bp
Tissue Shoot grown with dessication
Clones 13 Clones [Download: CSV  ,  FASTA ]
whvd12l18    whvd3i05    whvd6n16    whvd8k11    whvd13k05    rwhvd10k18    rwhvd12l18    rwhvd1l02    rwhvd3i05    rwhvd6n16    rwhvd8k11    rwhvd13k05    rwhvd14c13   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os01g0848200 [Oryza sativa (japonica cultivar-group)] >gi|15408889|dbj|BAB64280.1| putative delta-1-pyrroline-5-carboxylate synthetase [Oryza sativa Japonica Group] >gi|113534333|dbj|BAF06716.1| Os01g0848200 [Oryza sativa (japonica cultivar-group)] >gi|215715215|dbj|BAG94966.1| unnamed protein product [Oryza sativa Japonica Group] >gi|218189375|gb|EEC71802.1| hypothetical protein OsI_04432 [Oryza sativa Indica Group]
Score 1316
Evalue 4.61228e-143
Total Hit Count 500
Registered year 2003
Contig Sequence     [ Download ]
>Wh_VWD_all.Contig1853
CCGATACATTCATTTCAGGTGCTCTTTGCCATAGAAAGACAACATGACAACGGATTCGAGAATTCATCAGAAACAGTACAGCTACTTCATATATGTAGCA
TAGATGTACCGATGCAATTCTACAGTTACAACAGCTAGTGCCATAACTACGACATTGTATGGATAAATCATTGTACACGAATAATCACGGAACTAGATAG
CGACATAGTAACAACAATGCTCTCTTGTCTTTCTTCATTCCTCGCACAGAGAGAAGGGGGCTTTGAAGAGGATTATTCTATAAAAATTGCTCTACAGCAG
GAATCCTCTACCCTCATTGCAAAGGAAGATCCTTGTGGGTGTACACAACTCCCTTGTCACCGTTCACTACTTGTCCACTCCCTCGCAGAATGCACCGAGT
GGTTAAAAGACCGTCGACGCCAACAGGTCCACGGGCATGTATGCGCCCTGTACTTATGCCAACCTCTGCACCTAGACCAAAGCGAGTCCCATCACAGAAC
CTTGTGCTTGCATTATGGAACACAGCAGCACTGTCAACTTGTTGTAGAAAAGTATCCGCTGACTTCTTATCAGTTGTGATAATACAATCTGTGTGTGCAC
TTCCATAACGATTTATATGGTCAATCGCTGACTGCACATCATCAACAAATTCGAGGGTGCATGCCATTGAGCTATACTCATGATGAAATGAATCTACCTT
CGGTACTTTCAATGTGTCATGTGCGACAGGCCCACCATAAATAACAACTCCTTCTTTCGCAAGTTCCATCAATAAATCATCAAGACCCTCTGTCTTGTTC
AGATCTTTATGAACAAGCAGTGTTTCCATAGCATTACACGCTGCAGGATAATCAACCTTTGCATCCAATACTATACGTTTTGCCATGTCCATGTCAGCTG
ATTTATCAATATAAACATGGCAGATACCATCAGCATGACCCAGAACGGGAATCTTGGTTTGTGCTTTGATTTGAGAAACAAGCCTGTTACTGCCTCTTGG
AATAACAAGATCAATCACATCGTCAAGCTTTAGAAGATCAGCAATTTCATCTTTGCTTTTCACAAGGCCAATAAGCTTTTTACCAACAGCATCTGGAATC
ACACTGGTTATGACCTTATGTAATATTGTGTTTGATCTCATAGCTTCTTTTCCTCCTTTCAGAAGAAGGC
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