Japanese | English  
Genome / Development
cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_VABA_all.Contig1149
Contig Information
Length 688 bp
Tissue Shoot with ABA treatment
Clones 4 Clones [Download: CSV  ,  FASTA ]
whva11f03    whva11f04    rwhva11f03    rwhva11f04   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os02g0190900 [Oryza sativa (japonica cultivar-group)] >gi|46390968|dbj|BAD16481.1| phytoene dehydrogenase-like protein [Oryza sativa Japonica Group] >gi|50726398|dbj|BAD34009.1| phytoene dehydrogenase-like protein [Oryza sativa Japonica Group] >gi|113535685|dbj|BAF08068.1| Os02g0190900 [Oryza sativa (japonica cultivar-group)] >gi|125538425|gb|EAY84820.1| hypothetical protein OsI_06187 [Oryza sativa Indica Group] >gi|125581115|gb|EAZ22046.1| hypothetical protein OsJ_005529 [Oryza sativa (japonica cultivar-group)] >gi|215766902|dbj|BAG99130.1| unnamed protein product [Oryza sativa Japonica Group]
Score 511
Evalue 4.10442e-50
Total Hit Count 311
Registered year 2003
Contig Sequence     [ Download ]
>Wh_VABA_all.Contig1149
CCAAGCCCGATTCCTACTCCGAGACAGGTGTACGGCGGGAGCGGGAGGAAGCGCCGGCGATGGCGACTCCAGCGAAGGAGGAGGCGGCGGCAGGGCAGAG
AGACGAGCTCGCCGACTCGCTGTCCGAGCTCTTCACCAACGTCTCCCTCATGGTCCGCGGCGAGCTCCAGGGAACCAACAACCAGCTCTCGCTGCTTGAA
AAGATGAACCAACGCGTGACAGAGGAGTACAGTAACCACGGAGATGTTGCATCCGGTCTGCGGGTCTTTGTAGAACAGCTGAACGAGAAAAACCAACGGT
TTGACGAGTACACAACACAGATCGACGCGATAGACCAGCAGGTGAGTGAGTTTGAGGCAGTGGTGTCCATGCTTGATAAGCATGTCTCCCTCTTGGAGAA
GAAAGTGAAGTCCGCATATCACATTGCTCCCACACAATGATTCGTCTCCCAAGCATGTTGTATATCACCCCTATCATCTTCTGTATTCTCTACAATAATT
GAGCATATCTCTAGTAGCCAAACACGTTTGGATGGGAAACTTAACACTCTAGTCCTAATGTTTCCACCATTGTTGTACTTGTAGTGTCACTGAATGGCCA
AGTCGTGGTGTTACTTCCAGGTACTTGTTGATACAGTACTATCTTTGCTATAATGCACAGCGCTGTAAGATTGTCCCCAAAAAAAAAA
page-top