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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_V4816_all.Contig1631
Contig Information
Length 1529 bp
Tissue Shoot grown under cold condition for 16days
Clones 8 Clones [Download: CSV  ,  FASTA ]
whv16n19g03    whv16n19g04    whv16n17j10    rwhv16n11n22    rwhv16n19g03    rwhv16n19g04    rwhv16n15m17    rwhv16n17j10   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit hypothetical protein NitaMp027 [Nicotiana tabacum] >gi|57014030|ref|YP_173501.1| hypothetical protein NitaMp164 [Nicotiana tabacum] >gi|56806536|dbj|BAD83437.1| hypothetical protein [Nicotiana tabacum] >gi|56806666|dbj|BAD83567.1| hypothetical protein [Nicotiana tabacum]
Score 250
Evalue 1.7595e-21
Total Hit Count 65
Registered year 2003
Contig Sequence     [ Download ]
>Wh_V4816_all.Contig1631 
CATCGGACGGCAGCCCTTTCGGGGGTTCCTTAGGGACCGATTCACTCTGCGTAGATTGACTGAACGCAGAAAGCCTTCCACTGGCAGGCGATCGTGTTTT
TCACAGGATTTCTCGTTACTCATGTCAGCATTCTCACTTCTGATATCTCCAGGTCTTGTCACCAAAAACCTTCCCCGATTGACAGAACGTCCCGCTACTG
ACACTTGAAAAAGCTGCTTTCAAGGTCTCGTCGCTTCGGTGAATCACTTGAGCCCTGAGACATTTTCGGTGCCATGGAGCTAGACCAGTGAGCTATTACG
CTTTCTTCAAAGGATGGCTGCTTCCAAGCCCACCTCCTGGTTGTCATCGCTCGATCACTTCCTTTTCCACTAAGTGATTGCTTAGGGACCTTAGCGTACG
ATCTGGGCTGTTTCCCTCTCGACTTTGGATCTTAGCACCCAATCAGTCTGTCTGTACTAAGGATGACGGCCTGTATTCGGAGTTTCCCTGGGGTTGGTAA
AGCGAAATGGGGGCCACCCTAGCCCATTGAGTGCTCTACCTCGGGCCATCGACATCATACGCTCTACTGAAATAGATTTCGCGGAAAACCAGCTATATCC
GATCTTGGTTGGCCTTTCACCCCTAGCCACAAGTCATCCCCGTATTTTGCCACATACGTGGGTTCGGTCCTCCAAGGCCTGTTAGAGCTCTCTTCAACCT
GCTCATGGCTAGATCGATCGGTTTCGGGTCAAATAGGAAGAACGTAAATCTTCCACCTCTGGAAAGCGCCTACACCTAATGGCTTAAGCCGCTGTTCCCA
TTTCCTCGCTGACCCATCATGCGAAAGGTACGCCGTTAGAGTGAGTGCGCCCGCGCTCCGCTCCTTCGACTGATTGTTCGCATCGGATCTCAGGTTCTCT
ATTGCACTCCCCGATTGGGGTTCTTTTCACCTTTCCCTCACGGTACTTGTACGCTATCGGTCATTGAGGAATACTTAGGCTTAGAGGGTGGTCCCCCTTT
CTCGCGTAAAAGCGATCATCATTCGAACACGCCGCGTTTTACTGGGAAGGATCGAACCATGGGAACGAATGAACAGGGCTATCACCTTCTTTGGCCGGAT
CTTCCAATCTTTTTAGAAAACCAGTTCACTGCGCGCCCCACCCCGTCATCAGTCCTGTGTTGCCTATGCTTGCGCCCCAAAACGGTTGCTGACTTTGTAC
AACTCCGTAGGGCGCGCTACGGCAACTTTTCTAACTACGCTTGCTGCTTGCTGGTTTTTCCATCATCCAATCCACAACAAATCGAATGAAACCGCTTCGG
ATTTCTTTTGATGAAAACCCTTGTTCCGCTCTCGCTCGCCGCTANTAACGGGGTCTCGGTTGATTTTCCTTCCTTTAGCTACTCAGATGTTTCAGTTCGN
TAAGTTNGAAAAGTCCAAAGAGCGCAGACTAGCCACGGAGCTTGGATACGGTTTCCCGATCGGAGATCCATGGATCACAGAAAAATCTCTCCCCATGGCC
TNTCGCCTNNGAAAGCGTCCTTCCTTCTC
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