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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_SHC_all.Contig2367
Contig Information
Length 565 bp
Tissue Shoot grown with cold treatment
Clones 8 Clones [Download: CSV  ,  FASTA ]
whsc1f08    whsc2e07    whsc13d14    whsc8b05    rwhsc2e07    rwhsc13d14    rwhsc1f08    rwhsc8b05   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit RecName: Full=40S ribosomal protein S27; AltName: Full=Manganese efficiency-related protein 1 >gi|14140095|emb|CAA59732.2| putative zinc finger protein [Hordeum vulgare subsp. vulgare] >gi|14495006|emb|CAC42134.1| putative ribosomal protein S27 [Hordeum vulgare subsp. vulgare] >gi|14495008|emb|CAC42162.1| putative ribosomal protein S27 [Hordeum vulgare subsp. vulgare] >gi|14495010|emb|CAC42163.1| putative ribosomal protein S27 [Hordeum vulgare subsp. vulgare]
Score 403
Evalue 8.50221e-38
Total Hit Count 346
Registered year 2003
Contig Sequence     [ Download ]
>Wh_SHC_all.Contig2367
AGCCGCCGCCGCCGCCTCCTCTTCGGATTGCCGCTGCTGGAGACCAGAGAGCGCGGTTCCCGAGCAAACCCTAGCCTCCCACGATGGTGCTGCAGAACGA
CATCGACCTGCTGAACCCGCCGGCGGAGCTCGAGAAGCTCAAGCACAAGAAGAAGCGCCTCGTCCAGTCCCCCAATTCCTTCTTCATGGACGTCAAGTGC
CAGGGCTGCTTCAACATCACTACTGTGTTCAGCCACTCACAGACTGTTGTGGTGTGCCCAGGCTGCCAAACAGTGCTCTGCCAGCCAACGGGTGGTAAGG
CCAGGCTCACCGAGGGTTGCTCCTTCCGCCGCAAGGGCGACTAAACCGAAGGCTATCTTAAAAAGCAAGCTGTTGTTGAACTCGTTAGTTTTTCAAGGGT
GTTGGTCTGAAAATTTTGCAATGTCGGCAAATTGAATCCATCTTTGGTAATTTGGTATCTAGCTCGAGCAATATTACTATGACACTGTACTATGTTCTGT
TTGGCCTGTGAGATCAGACTAGTAGTTCCTGCCAGGAAATATGGTTGTCTGGTGAAAAAAAAAAA
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