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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_SHC_all.Contig65
Contig Information
Length 547 bp
Tissue Shoot grown with cold treatment
Clones 2 Clones [Download: CSV  ,  FASTA ]
whsc15m24    rwhsc15m24   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os08g0564500 [Oryza sativa (japonica cultivar-group)] >gi|113624500|dbj|BAF24445.1| Os08g0564500 [Oryza sativa (japonica cultivar-group)] >gi|125562592|gb|EAZ08040.1| hypothetical protein OsI_30304 [Oryza sativa Indica Group] >gi|125604358|gb|EAZ43683.1| hypothetical protein OsJ_027166 [Oryza sativa (japonica cultivar-group)] >gi|215769144|dbj|BAH01373.1| unnamed protein product [Oryza sativa Japonica Group]
Score 544
Evalue 3.56188e-54
Total Hit Count 317
Registered year 2003
Contig Sequence     [ Download ]
>Wh_SHC_all.Contig65 
CCACACCGCAAGGTGAAGAAGCGCCGTCTCAACTGCAAGCAGGTGCGCCGCGGCAAGTTCCTCGTCAAAGCCGACGACGCCGTCTACGACGAGCTCGTCA
AGCTGGCCGACCAGGGCAAGGATTCCGAGGGCAAGGCGCTACCCGTCGACGAGGACCTCCCCGGCATGGGCCAGTTCTACTGCCTCCACTGCGATCGGTA
CTTCGCGGATGAGACCGTAAAGGAGGATCACTACCGCTCAAAGCGCCACAAGAAAAGGGTCAAGCAGTTGTCTGGGCCAGCCCCACACACGCAAATAGAT
GCCGATCTCGCTGGTGGAATGGGAATGCCGGACAATGGCTTGAAGCTCATGTCTTCCTGAACTTCATGATCGTTGTTTGATGTTTTATTGCTGCTGCTAT
ACATCTGTACCAACTTTGCTTGATTTGTAACTTGCAAATAGTCTCTTTGGTCGAAGAGGTTAGGATTTTACATTGCTGTATCTGCCTCATGGTTGCCAAC
TTTTATCTAAATTGAGAACGAGTGACTTATCTGCGTCAAAAAAAAAA
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