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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_RDr_all.Contig2617
Contig Information
Length 1909 bp
Tissue Root of dessiccated seed
Clones 11 Clones [Download: CSV  ,  FASTA ]
whrd1p23    whrd6h03    whrd8c08    whrd13a03    whrd15f02    whrd15g13    whrd16c18    whrd16k03    whrd16p13    whrd19j21    whrd20n12   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os02g0519900 [Oryza sativa (japonica cultivar-group)] >gi|49387779|dbj|BAD26337.1| putative elongation factor 2 [Oryza sativa Japonica Group] >gi|113536503|dbj|BAF08886.1| Os02g0519900 [Oryza sativa (japonica cultivar-group)] >gi|119395216|gb|ABL74569.1| elongation factor 2 [Oryza sativa (japonica cultivar-group)] >gi|125539668|gb|EAY86063.1| hypothetical protein OsI_07431 [Oryza sativa Indica Group] >gi|125582310|gb|EAZ23241.1| hypothetical protein OsJ_006724 [Oryza sativa (japonica cultivar-group)]
Score 2894
Evalue 0
Total Hit Count 500
Registered year 2003
Contig Sequence     [ Download ]
>Wh_RDr_all.Contig2617
CGGATCGGGAGCGCCGCCGCTTCCCCACCTCGTCTCTCGGCGAACCCCCAAGGAACTATATTCCCAGTGTGATATCCAAAACCAGTCAAGATGGTGAAGT
TTACAGCGGAGGAGCTCCGCGGAATTATGGACAAGAAAAATAATATTCGTAACATGTCTGTTATTGCTCATGTTGACCACGGCAAGTCTACGCTTACGGA
TTCCCTTGTGGCAGCTGCTGGGATTATCGCCCAGGAAGTTGCTGGTGATGTTCGCATGACTGATACCCGTGCAGATGAGGCAGAGCGTGGTATTACAATC
AAATCCACGGGTATCTCTCTTTTCTATCAGATGACTCCTGAATCACTCGAGATGTACAAGGGCGACAGGGATGGGGATGAATACCTGATCAACCTTATTG
ATTCACCTGGCCACGTTGACTTTTCTTCGGAGGTCACAGCTGCTCTTCGTATCACTGATGGTGCTTTGGTGGTGGTTGACTGTATTGAGGGTGTCTGTGT
GCAGACCGAAACTGTGCTGCGCCAAGCTCTTGGTGAGAGGATTAGGCCTGTCCTCACCGTGAACAAGATGGACAGATGCTTCCTTGAGCTTCAAGTGGAA
GGTGAGGAAGCATACCAGACTTTCTCCCGTGTCATTGAAAATGCCAATGTCATCATGGCAACATATGAAGATGTGCTCCTTGGTGATGTCCAAGTGTACC
CGGAGAAAGGGACTGTTGCATTCTCTGCTGGTTTGCATGGGTGGGCTTTCACCCTTACAAACTTTGCTAAGATGTATGCCTCCAAGTTTGGTGTTGATGA
GGTGAAGATGATGGAGAGGCTGTGGGGTGAGAACTTCTTTGACCCAGCCACAAAGAAATGGACCTCCAAGAACACTGGCACAGCTACCTGCAAGAGAGGT
TTTGTTCAGTTCTGCTACGAGCCAATCAAGCAAATCATAGCCACCTGCATGAATGATCAGAAGGATAAGTTGTGGCCTATGTTGAAGAAGCTTGGTGTGA
CGATGAAGAATGATGAGAAGGACTTGATGGGCAAGGCTCTCATGAAGCGTGTGATGCAAACTTGGCTGCCTGCCAGTCGTGCTCTGCTTGAGATGATGAT
ATTTCACCTCCCCTCTCCCTCGAAGGCACAGAGGTATCGTGTGGAGAACTTGTACGAGGGTCCCCTTGATGATATATATGCTAATGCTATCAGAAACTGC
GACCCTGATGGTCCTCTTATGCTGTATGTCTCCAAGATGATTCCAGCATCTGACAAGGGTAGATTCTTTGCCTTTGGACGCGTTTTTGCCGGGAGGGTCG
CAACTGGCATGAAGGTCCGTATCATGGGTCCCAACTTTGTTCCTGGCCAGAAGAAGGATCTATATGTGAAGAGTGTCCAGCGGACTGTTATCTGGATGGG
AAAGAAGCAAGAGTCTGTTGAGGATGTTCCCTGTGGTAACACTGTTGCTTTGGTTGGTTTGGATCAGTTCATCACCAAGAATGCAACCCTGACAAATGAG
AAGGAAGTTGATGCCTGCCCAATCAGGGCTATGAAGTTCTCTGTGTCCCCTGTTGTGCGTGTTGCCGTTCAGTGCAAGGTGGCATCTGATCTTCCTAAGC
TTGTTGAGGGTTTGAAGCGGCTGGCGAAGTCTGACCCTATGGTTCTCTGTAGCATTGAAGAGTCTGGTGAGCATATCATTGCTGGAGCTGGAGAGCTTCA
CCTTGAAATCTGTTTGAAGGATCTGCAGGAGGACTTCATGGGTGGTGCTGAAATTATTGTTTCCCCTCCCGTCGTCTCCTTCCGTGAGACTGTTCTTGAG
AAGTCCTGTCGCACTGTCATGAGCAAGTCCCCCAACAAGCATAACCGTCTTTACATGGAAGCTCGCCCATTGGAGGAGGGATTGGCTGAGGCTATTGATG
ATGGCCGCA
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