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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

whsh_all.Contig1255
Contig Information
Length 464 bp
Tissue -
Clones 18 Clones [Download: CSV  ,  FASTA ]
whsh12n22    rwhsh12n22    rwhsh16n11    whsh16n11    whsh1b17    rwhsh1b17    rwhsh18f08    whsh16i18    rwhsh10e11    rwhsh16i18    whsh10e11    whsh8k04    rwhsh13m19    whsh13m19    rwhsh8k04    rwhsh15i05    whsh15i05    whsh18f08   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os06g0101600 [Oryza sativa (japonica cultivar-group)] >gi|122168719|sp|Q0DFC9|PLAS_ORYSJ RecName: Full=Plastocyanin, chloroplastic; Flags: Precursor >gi|152032655|sp|A2Y886|PLAS_ORYSI RecName: Full=Plastocyanin, chloroplastic; Flags: Precursor >gi|3885896|gb|AAC78108.1| plastocyanin precursor [Oryza sativa] >gi|55296746|dbj|BAD67938.1| plastocyanin, chloroplast precursor [Oryza sativa Japonica Group] >gi|113594570|dbj|BAF18444.1| Os06g0101600 [Oryza sativa (japonica cultivar-group)] >gi|125553691|gb|EAY99296.1| hypothetical protein OsI_21262 [Oryza sativa Indica Group] >gi|215697765|dbj|BAG91958.1| unnamed protein product [Oryza sativa Japonica Group]
Score 481
Evalue 4.94892e-47
Total Hit Count 427
Registered year
Contig Sequence     [ Download ]
>whsh_all.Contig1255 
GAGGCGCCAACGGCGGCGTGCTGGTGTTCGAGCCCAACGAATTCAGCGTCAAGTCCGGCGAGACCATCACCTTCAAGAACAACGCCGGGTTCCCGCACAA
CGTGGTGTTCGACGAGGACGCCGTGCCGTCCGGCGTGGACGTCTCCAAGATCTCCCAGGAGGAGTACCTCAACGCCCCAGGCGAGACCTTCTCAGTCACG
CTCACCGTCCCCGGCACCTACGGCTTCTACTGCGAGCCGCACGCCGGGGCCGGCATGGTCGGAAAGGTCACCGTCAACTAAGCTATCTTCTAGTAGCTCC
CTGTCCTGTCCTTGAGAATTTGGGTCCATTGTTGATCGGTCAGACCGGAGGTGTGTCATGCATGCATATTGATTAATTGTACGAACGTACGCTATATGTA
TATGTTTTCTATAAGATGAGATGAGGCTCTTGATGATAAGTAATCCTTCTTCTTAAAAAAAAAA
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