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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_OKCS_all.Contig2020
Contig Information
Length 826 bp
Tissue Seed DPA5
Clones 4 Clones [Download: CSV  ,  FASTA ]
whok10e01    whok1i01    rwhok10e01    rwhok1i01   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os08g0500000 [Oryza sativa (japonica cultivar-group)] >gi|42407349|dbj|BAD08810.1| putative COP9 complex subunit 6 [Oryza sativa Japonica Group] >gi|89267201|emb|CAJ81251.1| COP9 signalosome subunit 6 [Oryza sativa] >gi|113624121|dbj|BAF24066.1| Os08g0500000 [Oryza sativa (japonica cultivar-group)] >gi|215764935|dbj|BAG86632.1| unnamed protein product [Oryza sativa Japonica Group]
Score 696
Evalue 2.07116e-71
Total Hit Count 183
Registered year 2003
Contig Sequence     [ Download ]
>Wh_OKCS_all.Contig2020
ATCAACCACTCCCAGAAGGATCTCCCTGTGACAATTTATGAGAGTGAGTTGCATGTTATTGATGGTGGCCCCCAGCTCATCTTTGTCAAATCAAATTACA
CAATTGAGACCGTAGAAGCAGAGAGGATATCTGTAGATCATGTTGCCCATCTGAAACCATCTGATGGTGGCTCTGCAGCAACTCAATTGGCTGCTCATCT
TACAGGAATACACAGTGCCATCAAGATGCTCAATAGCAGGGTTCGTGTTATCCAGCAATACCTTGGTGCCATGCAAAAGGGTGATATCCCACTGGATAAT
TCACTTCTTAGGCAAGTCTCAAGCCTCGTAAGAAGACTACCAGCTATGGAATCAGAGAAATTCCAAGATGACTTCTTAACGGAATACAATGACACCCTCC
TCATGACTTACCTTGCAATGTTCACGAACTGTTCAAGCACAATGAACGAGTTGGTCGAGAAATTTAACACCACCTATGAGAGATCCCCTGCCAGGAGAGG
AGGCCGAGGCGCTTTCATGTAGATGGGTTCCAGCCGTCCTGCTGCTGCTGAGGTTTTGGTGCTGGTTATCCATGCTGCTGAGATTTTGAAAATAGTTCTC
ATATCTAGACGCAATTTTTGCGTGCAATCAGTTAGGTGCTCTATCTTCCGGCAGTATCCGAGACTTTTCAATCTTCTTATCCTCTCTGGGTTGGATCAGT
GACACGACGTGCCTGGGATGATTGATTATCCTCTTGTCCTGAAGTTGACATGTAAAGTTCGGCTTAATAGATGTTGCTCAAGTTAACTCGTATATCGGTC
TTATCCTGCCTTTTTGAAAAAAAAAA
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