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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_EMC_all.Contig1604
Contig Information
Length 819 bp
Tissue Dormant seed with cold treatment after water absorption
Clones 3 Clones [Download: CSV  ,  FASTA ]
whec13m23    rwhec7p23    rwhec13m23   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os02g0519900 [Oryza sativa (japonica cultivar-group)] >gi|49387779|dbj|BAD26337.1| putative elongation factor 2 [Oryza sativa Japonica Group] >gi|113536503|dbj|BAF08886.1| Os02g0519900 [Oryza sativa (japonica cultivar-group)] >gi|119395216|gb|ABL74569.1| elongation factor 2 [Oryza sativa (japonica cultivar-group)] >gi|125539668|gb|EAY86063.1| hypothetical protein OsI_07431 [Oryza sativa Indica Group] >gi|125582310|gb|EAZ23241.1| hypothetical protein OsJ_006724 [Oryza sativa (japonica cultivar-group)]
Score 1052
Evalue 1.06263e-112
Total Hit Count 500
Registered year 2003
Contig Sequence     [ Download ]
>Wh_EMC_all.Contig1604
TTTTTTTTTTAGAACCAGTGGACAACAGATAGATAATCTAAGTAAAACATCCGTTACATCACCAGACATCAAAACATAGTTCCCAGTATCACGACAAGTA
GGTCATAACAGCAAGACTCATCGATACAAAATAGTGCAGCTCTCTTTAACAACACAAGACCAGGTAAGGGATAACAGCACCAAAAATTTAGAGCTTGTCC
TCGAAATCGGATAGAGGGGTCATCTGCTCCTTGAGGCCCTTCCTCTTGCGGATATCCGTGACGAGCGTCGCCGACTGGGTGCCTGGGTCCAAAGGATCAG
AAGCCATGATGTCCCAGTGGTCAAACACACACTGGGGGAAGGCCTGGCCGGACGTCGCGGCCCTCAGGGTGCTTGAGAACCCAAAGGATTCAATGACGGG
GAGGTAGGCCTTGATGTTGTAGAGCGGGGTACCTTGCCTCTGCATCTCCTCGAACACGTGCCCTCTCTTCTGATTCAGAACACCATAGATACCACCAAGC
GCATTCTCCGGGGCCTGGATCTCAACCAGGTACACAGGCTCCAGCAGCCTTGGCTTGGCAGTCAGCTGAGAAGCATAAATGACCCTCCTGGCCGTGGGAA
TGACCTGACCACCACCCCTGTGGATAGCATCAGTGTGGAGAACAACATCACAGACCTCAAAGCAAATGCCACGCATGTTCTCCTCAGCCAACGCGCCTTC
CTTTGACGCCCACTGGAAACCAGCCACAACAGAGTCCTTGATTTCATTAAGATACTGCACTCCCTTACACATGTCGACNACCATGTTGGGGCCAGTCGTC
TCAGGTCCAAAGCACCAAA
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