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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_EMC_all.Contig30
Contig Information
Length 417 bp
Tissue Dormant seed with cold treatment after water absorption
Clones 2 Clones [Download: CSV  ,  FASTA ]
whec14p16    rwhec14p16   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os01g0644000 [Oryza sativa (japonica cultivar-group)] >gi|55295960|dbj|BAD68000.1| unknown protein [Oryza sativa Japonica Group] >gi|55297115|dbj|BAD68759.1| unknown protein [Oryza sativa Japonica Group] >gi|113533227|dbj|BAF05610.1| Os01g0644000 [Oryza sativa (japonica cultivar-group)] >gi|215686630|dbj|BAG88883.1| unnamed protein product [Oryza sativa Japonica Group] >gi|215768597|dbj|BAH00826.1| unnamed protein product [Oryza sativa Japonica Group] >gi|218188747|gb|EEC71174.1| hypothetical protein OsI_03044 [Oryza sativa Indica Group]
Score 230
Evalue 6.30449e-18
Total Hit Count 8
Registered year 2003
Contig Sequence     [ Download ]
>Wh_EMC_all.Contig30 
ATGGCCGCGCCCGCACAAGGGTCAAGGGCTACTCTGCTTAGCTGCAAACACAACCAGTCAACCATTGTCCAAGTAGCGAGTAGGACATCTCGTAGAAGTA
CCCTGGCATACATTTCGTCTGCCTTCTTTGCAATGTTCCTGCTGGCTGAACATGCTGAAGCCAGAACCTCGAGACAAGAGAACAAGAGGAAAGTAATGGA
GAAGCTGGAGATGGTCCGGGAGGAGGCCCTGGGCTCGAAGGAGAAGAAAGAGAACACGAACAAGGAGTCTGTGGCAAACTTGTTGATCCCTCCTACTTTG
GTCGATGCTTACATCTGAAAGGCATCGTGTCGCTGTAAATTTTATGTTTATGCTAAGTGCTACTTAACCTTGCAAAAATTCTGAATGTACTAATAACAAC
TGGAACCAAAAAAAAAA
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