Japanese | English  
Genome / Development
cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_EM_all.Contig2126
Contig Information
Length 875 bp
Tissue Dormant seed with water absorption
Clones 7 Clones [Download: CSV  ,  FASTA ]
whem4c12    whem5c12    whem12h24    rwhem3h05    rwhem4c12    rwhem5d13    rwhem12h24   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os02g0519900 [Oryza sativa (japonica cultivar-group)] >gi|49387779|dbj|BAD26337.1| putative elongation factor 2 [Oryza sativa Japonica Group] >gi|113536503|dbj|BAF08886.1| Os02g0519900 [Oryza sativa (japonica cultivar-group)] >gi|119395216|gb|ABL74569.1| elongation factor 2 [Oryza sativa (japonica cultivar-group)] >gi|125539668|gb|EAY86063.1| hypothetical protein OsI_07431 [Oryza sativa Indica Group] >gi|125582310|gb|EAZ23241.1| hypothetical protein OsJ_006724 [Oryza sativa (japonica cultivar-group)]
Score 1217
Evalue 8.79756e-132
Total Hit Count 500
Registered year 2003
Contig Sequence     [ Download ]
>Wh_EM_all.Contig2126
TAAGTAAAACATCCGTTACATCACCAGAACATCAAAACATAGTTCCCAGTATCACGACAAGTAGGTCATAACAGCAAGACTCATCGATACAAAATAGTGC
AGCTCTCTTTAACAACACAAGACCAGGTAAGGGATAACAGCACCAAAAATTTAGAGCTTGTCCTCGAAATCGGATAGAGGGGTCATCTGCTCCTTGAGGC
CCTTCCTCTTGCGGATATCCGTGACGAGCGTCGCCGACTGGGTGCCTGGGTCCAAAGGATCAGAAGCCATGATGTCCCAGTGGTCAAACACACACTGGGG
GAAGGCCTGGCCGGACGTCGCGGCCCTCAGGGTGCTTGAGAACCCAAAGGATTCAATGACGGGGAGGTAGGCCTTGATGTTGTAGAGCGGGGTACCTTGC
CTCTGCATCTCCTCGAACACGTGCCCTCTCTTCTGATTCAGAACACCATAGATACCACCAAGCGCATTCTCCGGGGCCTGGATCTCAACCAGGTACACAG
GCTCCAGCAGCCTTGGCTTGGCAGTCAGCTGAGAAGCATAAATGACCCTCCTGGCCGTGGGAATGACCTGACCACCACCCCTGTGGATAGCATCAGTGTG
GAGAACAACATCACAGACCTCAAAGCAAATGCCACGCATGTTCTCCTCAGCCAACGCGCCTTCCTTTGACGCCCACTGGAAACCAGCCACAACAGAGTCC
TTGATTTCATTAAGATACTGCACTCCCTTACACATGTCGACGACCATGTTGGGGCCAGTCGTCTCAGGTCCAAAGCACCAAATCTTCTTGGCAAGATCCT
TGTCCCACCCAAACTCCTCAGACAGGATCTTGGACCGCACCTTAGGATCATCACGTGGGCCAATGCGACCATCAT
page-top