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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig975  (registered. 2012)
Contig Information
Length 875 bp
Clones alternative view 113 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 6
Wh_dL Crown of seedling 4
Wh_e Seed DPA10 5
Wh_r Root 2
Wh_yd Spikelet at late flowering 3
Wh_CSEC Callus 3
Wh_DPA20 Seed DPA20 2
Wh_EMI Dormant seed with water absorption after breaking 2
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 2
Wh_MS Seed DPA5 of DT3DL CS wheat 5
Wh_OKCS Seed DPA5 5
Wh_RDr Root of dessiccated seed 9
Wh_SHC Shoot grown with cold treatment 1
Wh_V4816 Shoot grown under cold condition for 16days 1
Wh_VHS Shoot with heat shock treatment 2
Wh_VSCB Liquid cultured tissue 6
Wh_VWD Shoot grown with dessication 1
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 1
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 1
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 2
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 1
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 2
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 3
WH_XR Roots, 18 day old plants were grown hydroponically 2
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 1
WH_XT Roots, 18 day old plants were grown hydroponically 2
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_SP 1
WH_XA Root 3
WH_XC Root, treated at 50 microM Al for 6h 21
WH_XE Seedling, infected with leaf rust 3
WH_XF Seedling, infected with leaf rust 5
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 2
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115462319|ref|NP_001054759.1|| Os05g0169100 [Oryza sativa (japonica cultivar-group)]
Score 428
Evalue 3.00E-118
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig975
CTTCCGTCTCCTCCCGCCGCCGCCGCAGCCGCCGCCTGCCTCGAGCCGCCGTCGCCATGGGGAGAAGACCTGCGAGGTGCTATCGGCAGATCAAGAACAA
GCCGTACCCCAAGTCAAGGTACTGCCGTGGTGTGCCTGACCCTAAGATCAGGATCTATGATGTTGGCATGAAGAAGAAGGGTGTCGACGAGTTCTCTCAC
TGTGTTCACCTTGTCTCATGGGAGAAGGAGAATGTGTCCAGTGAGGCTCTTGAGGCTGCCCGTATTGCTTGCAATAAGTACATGACCAAGCATGCAGGAA
AGGATGCCTTCCACCTCAGGGTCAGGGTTCACCCGTTCCATGTGCTCCGTATCAACAAGATGCTTTCGTGTGCCGGGGCTGATAGGCTCCAGACTGGTAT
GAGGGGTGCTTTTGGGAAGCCGCAGGGAGTCTGTGCCCGTGTTGCCATTGGGCAGGTCCTCCTTTCTGTGCGGTGCAAGCCCAACAATGCCATCCATGCC
ACTGAGGCCCTTCGTCGTGCCAAGTTCAAGTTCCCTGGCCGCCAAAAGATCATTGAGAGCAGGAAGTGGGGCTTCACCAAGTTCAACCGCAACGACTACC
TCAAGTTCAAGAGTGAGGGCAGGATCTTGCCTGATGGAGTCAACGCTAAGCTGCTCGGATGCCATGGCCGCCTTGCGAACCGTGCCCCTGGACAAGCTTT
CCTGTCTGCCGCATAATCTAGCAGAAGAAGTCTATCCGTTCTATCAGAACTTATTTTACTGTGTGGAACTTAGATTCCAAGTGCCTGTGGTGCTATGTTA
TTTTGTCTGAATGTTGTGTCGAACCTTGTTATGGAAGATATTATCTATTTTGTGATGATGGTACTAATATAAAAA
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