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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig9662  (registered. 2012)
Contig Information
Length 1408 bp
Clones alternative view 95 Clones [Download: TSV  ,  FASTA ]
Wh_dL Crown of seedling 3
Wh_e Seed DPA10 2
Wh_f Spike at flowering date 1
Wh_oh Pistil at heading date 1
Wh_r Root 5
Wh_yd Spikelet at late flowering 3
Wh_CSEC Callus 1
Wh_DPA20 Seed DPA20 2
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 2
Wh_KMP Shoot grown under continuous light 4
Wh_KMV Shoot grown with continuous light after cold treatment 2
Wh_MS Seed DPA5 of DT3DL CS wheat 1
Wh_OKCS Seed DPA5 3
Wh_PCDAM Anther at meiosis 4
Wh_RDr Root of dessiccated seed 2
Wh_SHDr Shoot grown with dessication 3
Wh_V483 Shoot grown under cold condition for 3days 1
Wh_VSCB Liquid cultured tissue 1
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 1
WH_XN Leaves, plant was grown at constant 23Ž 1
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 1
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 1
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XT Roots, 18 day old plants were grown hydroponically 2
WH_SP 4
WH_XA Root 19
WH_XB Root 5
WH_XC Root, treated at 50 microM Al for 6h 9
WH_XD Root, treated at 50 microM Al for 6h 7
WH_XF Seedling, infected with leaf rust 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115462609|ref|NP_001054904.1|| Os05g0208000 [Oryza sativa (japonica cultivar-group)]
Score 554
Evalue 1.00E-155
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig9662
GGATTTATTTTTTCGAGCCACAGATAAAATTGAGCACATACCATACAAAACAAGATGGCACAAGCAGGTACTCCCTCCGTTCCGAATTACTTGTCGTAGG
TATGGATATATTTAGATGTATTTTAGTTCTAGATACATCTATTTCTGCGACGAGTAATTTAGAACGGAGGGAGTAGTAATATTGTCTCATGGCTGTGCCC
AACCTACAGAAGTATGCCCGCCAAAAAAATTGCCCCAATTACAACAAATAATGTGATTATTGTAACAACGTCAAGAGTACCACAGCAAATGTAAGCTACG
GTAAAAATCGCTTAAAACTCTGTCTACCAAAAACAACCACGGGAGTGCAAAGCTGCTGGAAAGTTATTAAATGTGTCGAATAAGGATTGATACTCTCGTC
TCCAACTGGAGATCTTATATGCCAATCTTCTTCTGGTACTTCTGGATTTGATTCAAGAAGAGCCACGTCATCATGACATGCGGGGCGATCCTGACACAAT
ATACAGGGAAGCCGGAGTAGAACTTAAATGGGCCACCGGTCTTCAAGGTTTGCATGGCGCAGTCCAAAGACCCAGTGTATGGGTACTTGCCAGTGGCATC
AGGTTGCATCTTCTGAATTTGTGTTTTCACGTAATCAAAGGGCAGACTGCAAGCAGCCGCACAGAATCCAGAAATGGCACTGGCTCCAATAACAGTCTGA
TATTCCCCAGCACCCAATTTGTCTCTGAACAGCTCAACACTTTGATCATAGGACGCAAGCATACCCATATTCAGTGACATGGCTCTCACCACAGTTGGGC
CTGCACCCTTCCAAAGCGCAAGGACGCCTTCATCAGCGGTGATACGGTAGAGTGCATGGAATGCATTCTTGTAGTGACGCCGCTGTGCTGCTGGTAGGGT
CGAGTCAGCTTGCATCCTAATGAGTGCCAAATCAGCAGGACTGCCCACACATGCGCCAATCGCTCCAGCAGTCAGACCAATAAAAGCTTTCTGAACAAGT
GGCAATGGCTTCCCATCATTTGCCTCAATTGCTTTGTTTGTCAAAACCCTGAAGGATCCAAGACGAGCTGTCGTATAGGTCGCTTGCCTTAGTAAACCAG
CTGACAAACCCTTGTAAAAGGAACCAAGGCCCTCATTAGCATACATGGTCTTTGCGACCTGAGCTGCAGATCCCTCGCCCAACTGGATCTTCACCTTGAT
CATGTCGATGGGCTGGATGACGCAGGTGGCGAGCATCCCGGAGGCGCCGCCATTGACGAATGGCTTGATCGTCTTCCAGACGCCAGTGGGCGCCGCGGCC
TGCTGCTGCTTCGCGTCCGCCATCTCCTGCCGGCGAGATCTAGCCGGGCCGGGAGAGGAAGTGTAGCAGACGCGAGCGGAGGGAAGGCGATGCGAGCCTC
GTGCCGAA
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