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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig9657  (registered. 2012)
Contig Information
Length 1593 bp
Clones alternative view 401 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 14
Wh_dL Crown of seedling 15
Wh_e Seed DPA10 8
Wh_f Spike at flowering date 4
Wh_h Spike at heading date 6
Wh_oh Pistil at heading date 12
Wh_r Root 13
Wh_yd Spikelet at late flowering 10
Wh_CSEC Callus 22
Wh_DPA20 Seed DPA20 3
Wh_EM Dormant seed with water absorption 20
Wh_EMI Dormant seed with water absorption after breaking 19
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 4
Wh_KMP Shoot grown under continuous light 4
Wh_KMV Shoot grown with continuous light after cold treatment 4
Wh_MS Seed DPA5 of DT3DL CS wheat 11
Wh_OKCS Seed DPA5 10
Wh_PCDAM Anther at meiosis 4
Wh_RDr Root of dessiccated seed 18
Wh_SHC Shoot grown with cold treatment 9
Wh_SHDr Shoot grown with dessication 2
Wh_V4816 Shoot grown under cold condition for 16days 2
Wh_V483 Shoot grown under cold condition for 3days 3
Wh_VHS Shoot with heat shock treatment 2
Wh_VSCB Liquid cultured tissue 21
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 3
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 3
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 2
WH_XN Leaves, plant was grown at constant 23 7
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 3
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 10
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 7
WH_XR Roots, 18 day old plants were grown hydroponically 5
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 7
WH_XT Roots, 18 day old plants were grown hydroponically 8
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 3
WH_CA 1
WH_SP 20
WH_XA Root 16
WH_XB Root 15
WH_XC Root, treated at 50 microM Al for 6h 25
WH_XD Root, treated at 50 microM Al for 6h 14
WH_XF Seedling, infected with leaf rust 2
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 4
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 3
WH_XV Leaves, plant was grown at constant 23 2
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|48596901|dbj|BAD22763.1|| ribosomal protein [Bromus inermis]
Score 531
Evalue 9.00E-149
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig9657
TTTTTTTTTTAAGAGGTTGCAAACTTTCCATCTTCAAACTTTGAAGATAAAGCAATTTTTCAGATAATGCCTAACCTTTATCTGAAACATATTAGATAAC
CAGATGAGGTCTCGAAATAGCACTTAATAAGGTAAACATCCACATTACATCTAGCAGCAACCACGAGTTCGCAAATCAACAAACATCAGGCAAAACTTAA
AAACGACGGTTCCAGGAACATAGGTCTATATCCTTGAAGATAACTGGCTATAGCAAAACGACTCAACGCCTCAGAATCAGGCCTTGGCAGCAGCCTGGGC
AGCGGCATCCCGCTTCCTCTGCTCCTCAATGATGGTGAGCTTGATACCCTTGCCCTTGGGGAGGCTCACCCACGGCTTGGTGCCCTTGCCGATGGTGAAC
ACGTTGCCCAGACGGGTGGCAAACTGGTGGCCCTGCGCATCCTCAACGTGGATGGTCTCGAAGGTTCCCTTATGCTTCTCCCTGTTCTTGATCACACCAA
CACGCCCAGTGTTGCGCCCACCAGTAACCATGACCACATTGCCGACGTCAAACTTGATGAAGTCAACAATCTTGTTGGTCTCCAGGTCGAGCTTGATGGT
GTCATTGGCCTTGATGAGTGGGTCTGGGTAGCGGATGGTGCGGCCATCATAGGTGTTCAGGTAGGGGATGCCCTTCTGGCCGAACTGGACAGACCTGACC
TTGCAGAGCTTGAACTTAGCATCCTCATCCCTGACAGAGTGAAGGCGGAAGCGACCCTTGGTGTCATAAAGAAGCCTGTAGTTCTCACCAGTCTTGGGAA
TGGAAATGATGTCCATGAACCCAGCAGGGTAGGTCTTGTCAGTGCGGACCTTTCCATCAACCATGATATGACGCTGCATAAGGATAGATTGCACTTCACG
GTAGGTGAGAGCATATTTCAGTCTGTTCCTCAGGATGAGGATCAGAGGCAGGCACTCCCTGGCCTTGTGAGGACCAGATGATGGCTTGGGGGCAAAAGCT
CCACCAAGCTTGTCAAGCATCCAGTGAGACGGGGCATTGAGCCTCTTCAGATGCTTCTTCAAACCCCTAGCCATGGTTGCGAGCTCGGGCTAGGTCGCCG
TGCTTCTCCTCTTCGGGCACCGCCGCCGCCTGCTCCTTCTCCTGTGCAACGCGCCGCCGCCGGGACCGACATTTTCTCGCAGCCCGAACCAAGGCGAGTT
CGTCGGCGACCATGTCTGGGCGCGGCAAGGGAGGCAAGGGGCTCGGGAAGGGCGGCGCCAAGCGCCACAGGAAGGTGCTGCGCGACAACATCCAGGGCAT
CACGAAGCCGGCGATCCGGCGCCTCGCTCGGAGGGGCGGCGTGAAGCGCATCTCCGGCCTCATCTACGAGGAGACCCGCGGCGTGCTCAAGATCTTCCTC
GAGAACGTCATCCGCGACGCCGTCACCTACACCGAGCACGCCCGCCGCAAGACCGTCACCGCCATGGACGTCGTCTACGCGCTCAAGCGCCAGGGCCGCA
CCCTCTACGGCTTCGGCGGCTAGGCCCTTCGTGGTCGTCAATCTTCGTCTCCCCCCTGCAGATTTCTAAAGCTCGATGAGAACCTGACTTGTC
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