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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig9547  (registered. 2012)
Contig Information
Length 1273 bp
Clones alternative view 95 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 5
Wh_e Seed DPA10 1
Wh_r Root 1
Wh_yd Spikelet at late flowering 1
Wh_CSEC Callus 4
Wh_DPA20 Seed DPA20 2
Wh_EM Dormant seed with water absorption 7
Wh_EMI Dormant seed with water absorption after breaking 5
Wh_KMP Shoot grown under continuous light 2
Wh_KMV Shoot grown with continuous light after cold treatment 1
Wh_MS Seed DPA5 of DT3DL CS wheat 1
Wh_OKCS Seed DPA5 1
Wh_PCDAM Anther at meiosis 1
Wh_RDr Root of dessiccated seed 1
Wh_SHC Shoot grown with cold treatment 2
Wh_V4816 Shoot grown under cold condition for 16days 1
Wh_VABA Shoot with ABA treatment 1
Wh_VSCB Liquid cultured tissue 2
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 1
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 2
WH_XN Leaves, plant was grown at constant 23 2
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 2
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 3
WH_XR Roots, 18 day old plants were grown hydroponically 4
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 1
WH_SP 2
WH_XA Root 4
WH_XB Root 18
WH_XC Root, treated at 50 microM Al for 6h 5
WH_XD Root, treated at 50 microM Al for 6h 5
WH_XF Seedling, infected with leaf rust 1
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 3
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 3
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115441607|ref|NP_001045083.1|| Os01g0896800 [Oryza sativa (japonica cultivar-group)]
Score 546
Evalue 2.00E-153
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig9547
ATCTGTCTGCGAAACAAGAAATGACTTCGCAGCAACATTAAAATCATAAACTTAGTATGGTTAGTAATAAACTGAAAAGACCTCAACGAAGGTCATGTCA
ACCTAAGGCCAACCAGCATGGAACAGCCACAAAAAATAAAGAAAGGGTGCCAGACTAAAGGATTAAGATTAAGATCCAAATGCCAGCACGGCACATAATC
CAGATAACACAATCTATAACTCAAGCGACATAACCAAAACTCAAAGGAACAGGCCCGTTGGGCAGGGTGCCAGACTTCAACAAAAACGCACGTTGCAATA
CTACACTGGGGTGGACAAGAACGCTCTTCACTCATCGTCCTCCTCGTCATCATCGGCGGCACCGGCAGAGTTGTTGAGGGCGTTGAGCCTTTCGACGAGG
CTGGCCTTCCTCTGCTCATAGGTCAGCTTCTTGGGGTTGTACCTCTTGTGAGTCTTGGGAGGCGCCTTGGTTGACTTGGCCATGGTGGGATCAGCACGGA
TGGCGGCATGAACCTTCTTGTAAACTGCTTCCATGTCATCAGCGGAGATTCCCCTCTTGATGTACTCACTGAAGTGAGTTTGGAATTTCTCTGGTTCCTC
ATCTGCTAGCGACCTCATGTAGTCAGCAACATGCCCTCCAAAGATGTACTTGCGGTGAATCTCAGCATCCAGAGACTTCTCGTCCTTTTTGAAACCAGCA
AATCTCTTATCACTGTGGGGAATGTCAAGGCCACCATCCAAAGCTCCCTTAAGGGCACCAAACACACGGTTTCCAGTGGTGGTCCTGATAAGACCAACAT
CCAAGAGCGCACGGAAAGGCCTCCTCTCATCAGAAGGCTCAACAGAGAAGTCCTCACCAGTGGCCTCAACATTGCCTTCATACTCCTCATCAAGATCACG
GTTCTTAAGCACACGACGAGCCAAAAGCAGACCAGTGCAGTAAGCTGCAGCATAGTTGGTGAGGCCAACTTCAAGACCATAGCGAGGCAACTCATGGGAG
TAGGCAGCGGCCATCACAATATCACCAGCAATGGTAGCATAAACAATTTGTGCAGTGACATCCTTGTTGGTAAATCGCACAACAAAACGGTACTTAGGAG
TGTTGTACTTGTTCTTGTCCTGGTTTGTGAGCCTCAGCCTGGCCCTGTAGTCAGTCTTGCCCTGGCGCCTTCTCTTGAACTTGACTTGGAAACGCTTGGA
GTACGCCCTTGTCTTCTGGTTCTTGATGTACACCCTCGCCTGCGAGGAGGGAGCTCCTGCGGAAGGAGGCGGC
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