Japanese | English  
Genome / Development
cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig9496  (registered. 2012)
Contig Information
Length 984 bp
Clones alternative view 87 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 4
Wh_dL Crown of seedling 2
Wh_e Seed DPA10 1
Wh_f Spike at flowering date 1
Wh_oh Pistil at heading date 2
Wh_r Root 2
Wh_yd Spikelet at late flowering 2
Wh_CSEC Callus 2
Wh_EMI Dormant seed with water absorption after breaking 10
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 2
Wh_KMV Shoot grown with continuous light after cold treatment 1
Wh_MS Seed DPA5 of DT3DL CS wheat 2
Wh_OKCS Seed DPA5 1
Wh_PCDAM Anther at meiosis 4
Wh_RDr Root of dessiccated seed 1
Wh_SHC Shoot grown with cold treatment 4
Wh_V483 Shoot grown under cold condition for 3days 1
Wh_VHS Shoot with heat shock treatment 1
Wh_VSCB Liquid cultured tissue 5
Wh_VWD Shoot grown with dessication 2
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 1
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 2
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 4
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 1
WH_XT Roots, 18 day old plants were grown hydroponically 1
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 6
WH_CA 1
WH_SP 2
WH_XA Root 6
WH_XB Root 2
WH_XC Root, treated at 50 microM Al for 6h 9
WH_XD Root, treated at 50 microM Al for 6h 1
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|125535694|gb|EAY82182.1|| hypothetical protein OsI_37384 [Oryza sativa Indica Group]
Score 390
Evalue 2.00E-106
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig9496
TTTTTTTTTTGACTTGAACAGATACCATTACTTTTGCTGGATGAATGAAGCCTGTCTGAACAGAGCAATCGATGAACAAGCCTACTTAAAATCTAACGAA
GTGAATCCCAGCAAACATAAAAGAGAGAAGCACAAAGCAGAGCAATGCATAAGTAACTAAGTGCATAACATAACGTTAACATATTCGAATACACACTAAC
AAACAGCATAATTAATTCTTGTTCAAGGTAATAATAAGACTTGAAAAACTTCAGTGTTCAACACTTAACAAAACTGGCGACTGGACACGGCTTTATGAAG
GAAGGCACACAGCTTAGTCGTCGAACAGGCTGAATCCCATCTCGCCATCTGATTCCTCCTCGGGCTCGTCCTTCTTCTCCTCCTCCTTCGGGGCAGCGGC
GGCAGCACCACCGGAGGCAGCAGCAGCAGGGGCAGCAACGGCAAACTTGCTTGGGTCCTTGAGGTACTCCTTGATCTTATCAGCATGATCATATGAGTAG
TCTGTCTCCAAAGCAACCGCAAGAACATTCTTGTATGCATTGAGGAACATGTGTGGCGCAGCAGCCATGGTGGGGTATGAGATCGCCAGGGACAGTGAGG
CAACCATGGACACACCAGAAGCAAACTTGTCCATCAGGTCTTCCTCGGTGAGGTCAAGAACCTCAGGGCTGAAGACTGACCCGCTGTCATAGACATTGCA
GATGACCAGCCCATAAGAGAAGGGGCGGATACCAAGCTTGGCAAGCAGGGCAGACTCAGAGGAGCCCACCTTGTCACCCTTCTTTATCAGCTCCACAGGG
ATAGTAATTTCCACAGTGCCCTTGTTAATCTTGGTGGGAATGTTGAGCACCTGGAAGAAGGACGTCTGGGAGGGATCCAGACCAGTGTTGCCAGGGGGAA
CCACCACATCAACAGGTGCAACTAGCCCAACACGAGCANNAGCACCAACCTTGTACTTGGCGACCTCCTCGCGAACCTCCTTGA
page-top