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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig15351  (registered. 2007)
Contig Information
Length 855 bp
Clones 20 Clones [Download: TSV  ,  FASTA ]
Wh Spike at meiosis 2
Wh_SL Seed DPA30 1
Wh_dL Crown of seedling 4
Wh_f Spike at flowering date 2
Wh_oh Pistil at heading date 4
Wh_r Root 2
Wh_yd Spikelet at late flowering 5
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os07g0109500 [Oryza sativa (japonica cultivar-group)] >gi|33146452|dbj|BAC79560.1| putative 60S ribosomal protein [Oryza sativa Japonica Group] >gi|50510030|dbj|BAD30642.1| putative 60S ribosomal protein [Oryza sativa Japonica Group] >gi|113610260|dbj|BAF20638.1| Os07g0109500 [Oryza sativa (japonica cultivar-group)] >gi|125556984|gb|EAZ02520.1| hypothetical protein OsI_24624 [Oryza sativa Indica Group] >gi|215686619|dbj|BAG88872.1| unnamed protein product [Oryza sativa Japonica Group] >gi|215736926|dbj|BAG95855.1| unnamed protein product [Oryza sativa Japonica Group]
Score 847
Evalue 6.76965e-89
Total Hit Count 500
Registered year 2007
Contig Sequence     [ Download ]
>Contig15351 
tgagaaaacagcaACATCTTTGAAATCT*ATGGGGCGAAAACAACAATACCAAACAATCCATTTGCTACAAAGATTGGAATAGTATAGATACTCAGAGGT
TTCAAATCTCAACGACACTCTCAGGCTACTAACGTAAACAATAACCACCATTATCCAGCAAAACAGATGATGCATGACTGCGCGGCACACTAGTATTTGA
TTGGTGCCAGGATGTCCAACTGAGAACCCAGCTTCTCCTCGGCAGCATTCTCAGCCTTGATGCGCAGCTTGGCCAGTTGCTTCTTCCTGTCGTACGACA*
GCTTGGCCTTCTCCTTCCTCTTCTCCTCCAGTTCCTTGATAGTTTCATGGTAGTTCCATCCGACCTCCTTGGAAAGCTCGCCGAGCAGACAGAACCTGTG
CCCCGGCTGCAGCCTCAGAACCTTGAGCGCGTCGGGGATGACCATACGCTTGGTGCGATCGTAAGGCGGCGGGACGCCCTCGAAAGCCTTGAGCCTGGCG
AGCGCGGCCTCGCCGCGGGGCGTCTTGTGCGGGATCATGCCGCGCACGGTGCGCCAGAAAATGCGCGAGGGGGCGCGGAAGTGGATGGGGCCGTGCGAGG
GCTTGGTGTTCATCCGCTTGCGGAGGAAGCGGAGGTACTTCATCTTCTGACGGACCAGTCCGCCGGAGATGCACATCTCCTCGCACCGGACAACCACTAC
GCGCTGCCCGTTGAGCAGCTCCTTGGCCACGATCGACGCAAGGCGACCCAGCATGTGGTGGCGCGCATCCACCACCACGCGACGCGCGGACACACCGGAG
CCGGACACCATCGTTACCTGTTGGCTTCTCCCTTCCTCTCTTCCTCCGGCtccgg
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