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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig9094  (registered. 2012)
Contig Information
Length 832 bp
Clones alternative view 45 Clones [Download: TSV  ,  FASTA ]
Wh_dL Crown of seedling 1
Wh_e Seed DPA10 1
Wh_f Spike at flowering date 2
Wh_h Spike at heading date 2
Wh_yd Spikelet at late flowering 1
Wh_KMV Shoot grown with continuous light after cold treatment 2
Wh_OKCS Seed DPA5 4
Wh_SHC Shoot grown with cold treatment 3
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 2
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 2
WH_XR Roots, 18 day old plants were grown hydroponically 1
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 3
WH_XT Roots, 18 day old plants were grown hydroponically 2
WH_CA 2
WH_XA Root 2
WH_XB Root 7
WH_XC Root, treated at 50 microM Al for 6h 1
WH_XD Root, treated at 50 microM Al for 6h 3
WH_XE Seedling, infected with leaf rust 4
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115450741|ref|NP_001048971.1|| Os03g0149200 [Oryza sativa (japonica cultivar-group)]
Score 287
Evalue 9.00E-76
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig9094
TTTTTTTTTTGGTAATATCTTTTCCATCAGTATCAATATTGGTTGCAAAATAAATAAATGGGATAACAATCTTTAACCCTACAACAATCAAATCGGAAGT
AGCACATAATAATGATACACAATCTAGTCGCCTAAACCGCCACCCACACCTTGTAAGGCCTGCGCCCCCTTCAAAAACGGATCCATTACACATATAAGAG
AAGAACAGGTACGGTAGCTTTGTTAAATAAGACCGTCTTTCCCGCAAAGCCCCTACGGACACAACTATCTTGGCAGAGAGAGATGCTCTAGGTTGTCTTG
GACTTGGGGGCCTTCTTCTTGGCCTGCCTCTTGGGGACCGAGTTCTTCATGCCCAGGAAGAAGAGAAGGGCTCCAAACAGCGCCAGGTTCTGTGTGAACT
TCATGAAGATCTGCACAAATTCAGCCTTCTCCATGTCGTAGTTGTAGAAGTCGTAGACAACCGGTGTGATGAAAGCAAGGTAGAGGGCCAGGAGATAAGC
ACCAAATGAACTGCTCAAGATAAACAGCAGACCTCCCAGACCCTTCAGACCAATGGTAGCAGCAATCACATGCTTCAACTCTACATGAGGCACCACAACT
CCGAGGTGTACAGATATATTTTTGGTGAAGCTGTTAAACTTAGGCTCAAGATTCTTTGCAGCTGGCCCGCCATCAGTTCCAAATTCAGTGAATTCCTGGT
AGGCGGAGAGGAGGAAGACGGAGGCGAAGAGGACCCTCCCGGCGAAGGACACGAACCCCATGTCGACCGGCGGCGGCGGTGAGGCGAGGCGAGCGACCGG
CGGGATACGGTGGGGGAGGGGGAGCCGCGGCG
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