Japanese | English  
Genome / Development
cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig8854  (registered. 2012)
Contig Information
Length 1741 bp
Clones alternative view 178 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 4
Wh_dL Crown of seedling 5
Wh_e Seed DPA10 4
Wh_f Spike at flowering date 1
Wh_h Spike at heading date 4
Wh_oh Pistil at heading date 4
Wh_r Root 3
Wh_yd Spikelet at late flowering 1
Wh_CSEC Callus 14
Wh_DPA20 Seed DPA20 1
Wh_EM Dormant seed with water absorption 5
Wh_KMP Shoot grown under continuous light 4
Wh_MS Seed DPA5 of DT3DL CS wheat 7
Wh_OKCS Seed DPA5 9
Wh_PCDAM Anther at meiosis 2
Wh_SHC Shoot grown with cold treatment 8
Wh_SHDr Shoot grown with dessication 5
Wh_V483 Shoot grown under cold condition for 3days 2
Wh_VSCB Liquid cultured tissue 4
Wh_VWD Shoot grown with dessication 2
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 1
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 1
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 2
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 6
WH_XN Leaves, plant was grown at constant 23Ž 12
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 4
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 6
WH_XR Roots, 18 day old plants were grown hydroponically 2
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 6
WH_XT Roots, 18 day old plants were grown hydroponically 8
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 6
WH_SP 5
WH_XA Root 11
WH_XB Root 4
WH_XC Root, treated at 50 microM Al for 6h 5
WH_XD Root, treated at 50 microM Al for 6h 4
WH_XF Seedling, infected with leaf rust 2
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 1
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 1
WH_XV Leaves, plant was grown at constant 23Ž 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|1170509|sp|P41378.1|IF4A_WHEAT|IF4A_WHEAT RecName: Full=Eukaryotic initiation factor 4A; Short=eIF-4A;
Score 815
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig8854
TTTTTTTTTTAATAACCATAACATTACTAGTACCGATTGCAGGATTACATGCGGTAGGTAAAGAGTCAAGGATGACACAAACAAATAACATCATTCGGTC
ATTACATAGTCTTAACAAATAAAGTGAGGACTCCAGCAACAGCAACATGAGCAGCAGCGCCTCCCTCCTCAGCACATAGAACCACAGCCTAGCAACTACA
AAAATTCCCAAAACATGGCTTAATAAATCCCAAATTGTCCACGACCACGACTTTAAAGTAGAACCCCAGCAGACCATTTATCACTTGAACCCCCCCACCC
ACAGACAAGAAAGTTGGTGATACTTCAACAAAAACAAAGCCCTGTCAGGACCCCCTTACCATATGTTCTCAACAGCCCGCCCGATCACAGAAGGTCGGCA
ACGTTGGCTGGGAGCTCTTCAATCACCACGTTGTAGAACTTCTGGATGTCAAACAGCATCCTCTCATCTTCACGGGTCACAAAGTTGATGGCCACACCCT
TCCTTCCAAACCGACCACTACGACCGATGCGATGCAGGTAGTTCTCTGGCTGGGTCGGGAGGTCATAGTTGATGACCAGGGACACTTGCTGGACATCAAT
ACCACGAGCAAGCAGGTCAGTGGTGATGAGCACACGTGAAGAACCTGATCTGAACTCTCTCATGATGATGTCCCTAGTGTTCTGGTCCATGTCTCCATGA
GTGGCGGAGACTGTGTGGTCCCTGCCCCTCATCTTGTCGGTGAGCCAGTCCACCTTGCGGCGGGTGTTCACAAAGATGACACTCTGGGTGATGGCAAGAG
TCTCATACAGGTCACACAGTGTGTCGAGCTTCCACTCTTCCTTCTCCACATTGACATAGAACTGCTTGATACCCTCAAGGGTGAGCTCGTCCCTCTTGAC
AAGAATCCTCACTGGCTTATTCATGAACTTGCGGGTAATCTCAAGGGCTTCAGGGGGCATGGTAGCAGAGAAGACACCAACTTGAATCTTCCCTGGGAGC
AGCTGGAAGATGTCATAAATCTGATCCTTGAAACCACGGGAAAGCATCTCATCAGCTTCATCAAGGACAAACATCTTGATGTTGTCAGGGCGCAGAGACT
GCCTGCGGAGCATGTCAAACACACGACCAGGAGTACCAACAACGACATGCACTCCACTTGCAAGAATCCTTTGGTCCTCACGAACTGAGGTTCCTCCAAC
ACATGCATGAACCTTCACACCCAAGTAGTCACCAAGTGCACGCATGACCTTCTCAATCTGCTGTGCAAGCTCACGGGTGGGAGCAAGGACCAAGGCCTGG
CACTCAACCAAACCATAGTCAAGCTGTTGGAGGATTCCAGAACAGAAAGTAGCAGTCTTTCCTGTTCCAGATTGTGCTTGCTGGATAACATCAAGCCCCT
TGCAGAAAGGAACGATTCCCCTTTGCTGGATGGCAGAAGGCTTCTCAAAACCATAAGCATAAATTCCTCTGAGGAGGTTCTCTTGGAGACCCATGTCATC
AAAGCTCTCATGAACTTCATCATAAGAGGTGAAGAACTCCTCAGTCTCACCTTGGTTCAGCAGCTCCTGCATCTTAGAATCATAGTTCTTAGCGTCAAAC
TGGGAACCTTCCGGTGCCATTCCTGCCATGGCTGAAGCGTCGGGGAGGAGGTGCCGGGGATCGCCTGAGGGTTTGGTCGCGCTGCGGTGAATCCGAGATC
AGGTCTCGGATTCGGCGGCGTGGGAGCGGAGGCGGTGAGGG
page-top