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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig86  (registered. 2012)
Contig Information
Length 1471 bp
Clones alternative view 81 Clones [Download: TSV  ,  FASTA ]
Wh_dL Crown of seedling 3
Wh_e Seed DPA10 2
Wh_oh Pistil at heading date 2
Wh_r Root 2
Wh_CSEC Callus 1
Wh_DPA20 Seed DPA20 9
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 1
Wh_MS Seed DPA5 of DT3DL CS wheat 1
Wh_OKCS Seed DPA5 3
Wh_RDr Root of dessiccated seed 3
Wh_SHC Shoot grown with cold treatment 2
Wh_SHDr Shoot grown with dessication 3
Wh_V483 Shoot grown under cold condition for 3days 2
Wh_VABA Shoot with ABA treatment 2
Wh_VSCB Liquid cultured tissue 1
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 1
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 2
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 2
WH_XN Leaves, plant was grown at constant 23 2
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 2
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 6
WH_SP 1
WH_XA Root 7
WH_XB Root 3
WH_XC Root, treated at 50 microM Al for 6h 3
WH_XD Root, treated at 50 microM Al for 6h 7
WH_XE Seedling, infected with leaf rust 2
WH_XF Seedling, infected with leaf rust 2
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 3
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23 ) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|219362481|ref|NP_001136523.1|| hypothetical protein LOC100216638 [Zea mays]
Score 263
Evalue 5.00E-68
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig86
GTTTGTCGCGTCACCAAAGTTGGGCATTACAAGTTCTGTCTGTCCAAGCTTTGTTCGCTGGACCAAGAGCTGATGGTACCAAAATGCTAGCATCCTAACG
CACCCACGAATCCCACATCAGGGCTTGAGTGACAGGGCCAGCCCGAACTTGGGGCTCTTCTCAATGGCCTTGGTGTCAACCTCGGTGGAGAAGGTGATGA
GAGACTTGGGCCTCCACGCGTGCTGGATGAGCGCACTTGCGATGCCGAAGTTGTTGTAGCGCCCCTTCACGGTCGTCAGGGGGTCCAGCTCGTGCTGCGT
CCCGACGGTGATGGTGTTCTCGTTGCTCGAGAAGCTGTCTTAATCGACCAACACCCTTTGTGGGTTCTAGGTTAGCGCGCAGTTGGGCACCGTAACCCGG
CTTCCGGTTCATCCCGCATCGCCAGTTCTGCTTACCAAAAATGGCCCACTTGGAGCACCCGATTCCATGGCACGGCTCACCGAAGCAGCCGCGCCATCCT
ACCTATTTAAAGTTTGAGAATAGGTCGAGGACGTTGCGTCCCCAATGCCTCTAATCATTGGCTTTACCTGATAGAACTCGTAATGGGCTCCAGCTATCCT
GAGGGAAACTTCGGAGGGAACCAGATACTAGATGGTTCGATTAGTCTTTCGCCCCTATACCCAAGTCAGACGAACGATTTGCACGTCAGTATCGCTTCGA
GAAAAAAAATCTCTCCTCGCTCTCGTCCGAGTCGCGTGAGGAGAAAGGAGGGAAGCCGGAAAGGGGTTCTCGCCGAGGCGGAAGGAGGAGATGGCCGGGA
AGGGAGGCAAGGGCCTGCTCGCGGCCAAGACGACGGCCGCCAAGACCGCCGAGAAGGACAAGGGGAAGAAGGCCCCCATCTCCCGCTCGTCCCGCGCGGG
ACTTCAGTTCCCTGTGGGCCGTATCCATCGTCAGCTGAAGCAAAGGACTCAGGCCAATGGCCGTGTTGGTGCTACTGCGGCGGTCTACTCTGCTGCCATC
CTGGAGTACCTGACGGCTGAGGTCCTGGAGCTGGCTGGCAACGCCAGCAAGGATCTCAAGGTGAAGCGTATCACCCCTCGTCACCTCCAGCTGGCCATCC
GTGGAGACGAGGAGCTCGACACCCTCATCAAGGGCACCATTGCTGGTGGAGGTGTGATCCCGCACATCCACAAGTCCCTGATCAACAAGTCTTCCAAAGA
GTGAGAAAATATATAGCAAAGGAGCATCTCTAGCTTAAACTGGACATTTTCTCAGTCGTCTGTGAGATAAGTTTATCGTCGCGTCGTTTAGCGTTTAGCT
GTGCTCCTTCCAGATCCAAGTCGTTGTCTGTCTGTGTAATGTTTACCTGGTACTGATTCAGTCATTTGGACATGGTGTTTATGTTGGTTCGTTGACTCTG
TGATTGGACTCTGAATGCAAAAACCTTTTAAACAAAAAAAAAATAATTGTTGGCCGTCTCCAAAAAAAAAA
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