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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig8349  (registered. 2012)
Contig Information
Length 1803 bp
Clones alternative view 300 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 15
Wh_dL Crown of seedling 6
Wh_e Seed DPA10 2
Wh_f Spike at flowering date 2
Wh_h Spike at heading date 5
Wh_oh Pistil at heading date 3
Wh_r Root 2
Wh_yd Spikelet at late flowering 8
Wh_CSEC Callus 25
Wh_DPA20 Seed DPA20 4
Wh_EM Dormant seed with water absorption 22
Wh_EMI Dormant seed with water absorption after breaking 19
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 2
Wh_KMP Shoot grown under continuous light 3
Wh_KMV Shoot grown with continuous light after cold treatment 2
Wh_MS Seed DPA5 of DT3DL CS wheat 7
Wh_OKCS Seed DPA5 6
Wh_PCDAM Anther at meiosis 4
Wh_RDr Root of dessiccated seed 7
Wh_SHC Shoot grown with cold treatment 6
Wh_SHDr Shoot grown with dessication 5
Wh_V4816 Shoot grown under cold condition for 16days 2
Wh_VABA Shoot with ABA treatment 2
Wh_VHS Shoot with heat shock treatment 5
Wh_VSCB Liquid cultured tissue 10
Wh_VWD Shoot grown with dessication 1
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 1
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 3
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 8
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 2
WH_XN Leaves, plant was grown at constant 23Ž 7
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 4
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 14
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 1
WH_XR Roots, 18 day old plants were grown hydroponically 7
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 3
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_SP 1
WH_XA Root 18
WH_XB Root 11
WH_XC Root, treated at 50 microM Al for 6h 10
WH_XD Root, treated at 50 microM Al for 6h 11
WH_XE Seedling, infected with leaf rust 1
WH_XF Seedling, infected with leaf rust 1
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 7
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 9
WH_XV Leaves, plant was grown at constant 23Ž 1
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 2
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|110270498|gb|ABG57075.1|| heat shock protein 90 [Triticum aestivum]
Score 1020
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig8349
GAGCAAAAGCAAGGGAAAACATAAGTAAAGCAGATTTTTTTTTTAGCAGGGAATATAAAAATATAGCTAACACATATTGTAGAACCAACAATAACGAACT
GTTCCACGAGTACCACAAACAGCTAACCGCGCTTAATGTTTGGCCAGCCAAAAGACAAAACCGATACAGCTAAACGTGCCAAAACCATCGAACTTCGACA
CTAAAGATAAAAACAACGCAGGGCATGGACATCCAACGACGACAGCCGACGGCCTTGCGCTTAGTCGACCTCCTCCATCTTGCTCTCACCAGCGTCATCC
TCCAGGGGTGGCATGTCGGTGTCGTTCTCAGGCGCCTCGTCGTCCTCGTCAATGCTCAGGCCAAGCTTGAGCATGCGGTGGATCCTGGTGCCGAAGGTGT
TGGGGTCCTCCAGGCTGAAGCCGGAGGTGAGCAGGGAGGTCTCGAAGAGCAGCATCACAAGGTCCTTGACAGACTTGTCGTTCTTGTCGGCGTCGGCGCG
CTTGCGAAGCTCGTCCATGATGGCGTTCTCAGGGTTGATCTCCATGGTCTTCTTGCTCGACATGTAGCCAGCCATGCTCGAGTCCCTCAAGGCCTGGGCC
TTCATGATCCTCTCCATGTTGGCAGTCCACCCATACTCACCAGTCACCAGACAGCAAGGAGAGTCCACAACACGGTCAGAGACGATGACCTTCTCCACCT
TGTCACCCAGCACCTCCTTGATGACCTTGCACAGACCCTCGAACTTCTCCTTGAGCTCCTCCTGCTTCTTCTTCTCGTCCTCGCTCTCATCAAGCTTCAG
ACCCTCCTTGGTGGCAGAGACAAGCTTCTTCCCCTCAAACTCCTTGAGCTGACCAATGGCATACTCATCAATGGCGTCAACCATGTAGATGACCTCATAG
CCCTTCTTCTTCAGCTTCTCAAGGAAGGGAGAGTTCTCCACAGCCTTCTTGCTCTCACCAGTGATGTAGTAGATCTCGTTCTGTCCCTCCTTCATCCTGG
TCACATAGTCCTTCAGGCTTGTCAGCTCATCGCCACTCTTGGTGGAGTGGTACCTCAGAAGCTCGGCAATCTTGGTCCTGTTCTGGGAGTCCTCGTGGAT
GCCAAGCTTGAGGTTCTTGGAGAAGGCCTCGTAGAACTTGTTGTAGTCCTCCTTGTTCTCAGCAATCTCAAAGAAGAGCTCAATGCACTTCTTGACAAGG
TTCTTCCTGATGACCTTGAGGATCTTGTTCTGCTGGAGAGTCTCACGGGAGATGTTCAGGGGAAGGTCCTCTGAATCAACAATACCCTTGACAAAGCTCA
GGTACTCAGGGATCAACTCCTCACAGTTGTCCATGATGAAGACACGGCGCACGTACAGCTTGATGTTGTTGGCCTTCTTCTTGTTGTCGAAGAGGTCGAA
GGGGGCCCTCTTGGGCACAAACAGGACAGCCTTGAACTCAAGCTGACCCTCAACAGAGAAGTGCTTGACAGCCAAATGCTCCTCCCAGTCATTGGTCAAG
CTCTTGTAAAAAGCTGCGTACTCTTCCTTGTTGATCTCCTCTGGTTTCCTCATCCAGATAGGCTTCTGCTTGTTGACCAAGTTCCACTCATGAGAGACTT
CCTTGATCTTCTTTTTCTTCTTTTCCTTCTCTTCCTTCTCCTCATCAACATCCTCAACCTTGCCCTCCTCAGTATCCTTCTTCTCCTCCTCATCTTCATC
ATCAGAAATTTCCTTCTCAGTGGTCTTCTCAGTCCACAGGGAGATGGGGTAGCTGATAAACTCAGAGTGCTTCTTAACTAGATCCTTGATGCGGCGCTCC
TCA
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