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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig8229  (registered. 2012)
Contig Information
Length 775 bp
Clones alternative view 129 Clones [Download: TSV  ,  FASTA ]
Wh_dL Crown of seedling 4
Wh_e Seed DPA10 7
Wh_oh Pistil at heading date 2
Wh_r Root 3
Wh_yd Spikelet at late flowering 5
Wh_DPA20 Seed DPA20 1
Wh_MS Seed DPA5 of DT3DL CS wheat 1
Wh_OKCS Seed DPA5 2
Wh_SHC Shoot grown with cold treatment 3
Wh_SHDr Shoot grown with dessication 3
Wh_VHS Shoot with heat shock treatment 4
Wh_VSCB Liquid cultured tissue 5
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 2
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 6
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 6
WH_XN Leaves, plant was grown at constant 23Ž 2
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 1
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 4
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 8
WH_XR Roots, 18 day old plants were grown hydroponically 7
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 7
WH_XT Roots, 18 day old plants were grown hydroponically 6
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 7
WH_SP 2
WH_XA Root 4
WH_XC Root, treated at 50 microM Al for 6h 4
WH_XD Root, treated at 50 microM Al for 6h 2
WH_XE Seedling, infected with leaf rust 19
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 1
WH_XV Leaves, plant was grown at constant 23Ž 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|471319|emb|CAA54065.1|| HvB12D [Hordeum vulgare subsp. vulgare]
Score 179
Evalue 4.00E-43
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig8229
AGATCTGGGCTGTTAGATAAAATGTGGTAGTACCAGGATTGACTTATAGGAGTCATTTTCCATACCCACAAATACCACAGCACATACATGCCAAAATTCA
CAAATTCCAAATGAGTTGTGTCCAAGCTACTGTTAAGACAGGAACACACTTCAAAATACCAGCAGTAGCAATATCCAAATGTCTGCAGTAATCGCAACAC
ATCAACTAAATGGAAGCATGGAATATCCACAATTTCAATGAAACAGATATTTAGAAGCCATCAACCATCACATATATAGCAAGCCATCAAACATCACATG
GTTCTTTCAATAAGAGGCACTTGATGATATCCTCTGAATTATGGACGCGACAACATTACTGAATGCTTGAAATAGGTTTGCACTTGACCACAACAGTTAC
TAATAGCGAGCCACTGACAGGCTAAAGTGCTTCATTTCGGGCTGGTGAAGAACTTGTTGATTCCTGGCATGATCTCGGGGGTCTTGTCCTGCACATAGGC
TCTGAGGCCATGCTCGGCGTAGCGCCTGCCCTCCTCATGGTTCTCAAGCACTCCCGCTGCCCTCCCCATCTTGTTGACCCTGACTTCTGGGTTGCCGGTG
ATGTTGCGGAGGAGGCTGAAGGCGCAGATGCCGATGGCGACGCCCGTCGCCGCGAACAGCGGGTACACCTCGGGCCTGACCCACTTGCTGGCCATCGGAG
TCGCGGGGAGGACGCTGCGCCGGCGGCGGAGGGGGAGAGTGAGTGAGAGAGACGAAAGTGGAGAGGCGACGGCGG
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