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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig8091  (registered. 2012)
Contig Information
Length 795 bp
Clones alternative view 360 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 18
Wh_dL Crown of seedling 2
Wh_e Seed DPA10 7
Wh_f Spike at flowering date 3
Wh_h Spike at heading date 2
Wh_oh Pistil at heading date 4
Wh_r Root 4
Wh_SH - 1
Wh_CSEC Callus 47
Wh_DPA20 Seed DPA20 8
Wh_EM Dormant seed with water absorption 17
Wh_EMI Dormant seed with water absorption after breaking 3
Wh_KMV Shoot grown with continuous light after cold treatment 1
Wh_MS Seed DPA5 of DT3DL CS wheat 2
Wh_OKCS Seed DPA5 8
Wh_RDr Root of dessiccated seed 15
Wh_SHC Shoot grown with cold treatment 5
Wh_SHDr Shoot grown with dessication 15
Wh_V483 Shoot grown under cold condition for 3days 2
Wh_VABA Shoot with ABA treatment 6
Wh_VHS Shoot with heat shock treatment 1
Wh_VSCB Liquid cultured tissue 30
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 3
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 3
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 11
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 1
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 1
WH_XN Leaves, plant was grown at constant 23Ž 25
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 11
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 4
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 6
WH_XR Roots, 18 day old plants were grown hydroponically 8
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 16
WH_XT Roots, 18 day old plants were grown hydroponically 5
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 3
WH_SP 2
WH_XA Root 2
WH_XB Root 4
WH_XD Root, treated at 50 microM Al for 6h 8
WH_XE Seedling, infected with leaf rust 9
WH_XF Seedling, infected with leaf rust 8
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 7
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 20
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|218199747|gb|EEC82174.1|| hypothetical protein OsI_26284 [Oryza sativa Indica Group]
Score 234
Evalue 1.00E-59
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig8091
TTTTTTTTTTAAGAAAGCATATATTATTATTCAACCTTGATGGGAGAGGGTAACAAGCCATCTAACGATGGTGCTCCTTACAAAGTTTCAACACAAGGGT
AACAAGCATACACGCAGAGAGGTGGGCTATGCTAGATTTTCCGTATACTCAGAGCGCGCAAGCTGGTAACGCCTGCTTGCGCTAGCACACAACTAAATAT
ACTGCACCACCAATATATAGCTGCTTTGCATGTAGACTCTGATATGGAGCTGGCAGTTGTTCAGAAACCATGAATCTTGATGTGTTCCTTCTTCACAATG
CCGGCCTGGACAAGGAAGTTTGAGACGTTCTTCCTCTGATCACCCTGGAGTTGAATGACCTGTCCAAGTTCTGTGTCCTGGACAACTGTACCATTGCAGC
AAAACTCTTTCTTGAGGTCTTTGAGGATCTTGCTGTAGCTGAACTCCTTCTTCAGGCCCTGGACAGTGGTCAGGCTCTTGCGACCATTACGCTGCTGGAT
GCGTACATGAACGTAGTCTTTTGATCCGGCAGCTGCACCAGCGTCCCCAGCATTCGCCTCGGCAAAGGGGTCAAAGGCAGTTGGGATCTGAACGTCAAGA
TCAGACATGAAATCTCCTGGTGAGAGTGGCAAAAGCTACACCAAGAACCTGGGAGGCGGTCGAGGAGGAAGAGATCAACCAAGAACTTTCCCGGGAGGAT
TTGGATCGCGGAGAGGCGCTGGCAGTCAGTCCTTGGTGTTCTTCCTCCTCTTTGGGTTGGATGCCTCCTATATAAAGACGAGGGAAGGAGGGGAA
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