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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig24480  (registered. 2003)
Contig Information
Length 1653 bp
Clones 30 Clones [Download: TSV  ,  FASTA ]
Wh_CSEC Callus 4
Wh_DPA20 Seed DPA20 2
Wh_EMC Dormant seed with cold treatment after water absorption 2
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 1
Wh_KMP Shoot grown under continuous light 3
Wh_KMV Shoot grown with continuous light after cold treatment 2
Wh_MS Seed DPA5 of DT3DL CS wheat 1
Wh_OKCS Seed DPA5 1
Wh_SHC Shoot grown with cold treatment 3
Wh_SHDr Shoot grown with dessication 1
Wh_V4816 Shoot grown under cold condition for 16days 4
Wh_V483 Shoot grown under cold condition for 3days 1
Wh_VABA Shoot with ABA treatment 4
Wh_VWD Shoot grown with dessication 1
Homology (BLAST) Top Hit Os11g0163100 [Oryza sativa (japonica cultivar-group)] >gi|34851127|gb|AAO62546.1| actin [Oryza sativa (japonica cultivar-group)] >gi|62732979|gb|AAX95098.1| actin [Oryza sativa (japonica cultivar-group)] >gi|62732980|gb|AAX95099.1| actin [Oryza sativa (japonica cultivar-group)] >gi|62732981|gb|AAX95100.1| actin [Oryza sativa (japonica cultivar-group)] >gi|77548869|gb|ABA91666.1| Actin-7, putative, expressed [Oryza sativa (japonica cultivar-group)] >gi|77548870|gb|ABA91667.1| Actin-7, putative, expressed [Oryza sativa (japonica cultivar-group)] >gi|77548871|gb|ABA91668.1| Actin-7, putative, expressed [Oryza sativa (japonica cultivar-group)] >gi|108864034|gb|ABG22379.1| Actin-7, putative, expressed [Oryza sativa (japonica cultivar-group)] >gi|108864035|gb|ABG22380.1| Actin-7, putative, expressed [Oryza sativa (japonica cultivar-group)] >gi|113644534|dbj|BAF27675.1| Os11g0163100 [Oryza sativa (japonica cultivar-group)] >gi|215686339|dbj|BAG87600.1| unnamed protein product [Oryza sativa Japonica Group] >gi|218185309|gb|EEC67736.1| hypothetical protein OsI_35242 [Oryza sativa Indica Group]
Score 1139
Evalue 0
Total Hit Count 500
Registered year 2003
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig24480 
GGAAATGATTATGGGACTCGCACGGAAAAATCTTACAAAGACTCTGGTAGATAGTTTGACACTCCCCCCACGCTAGCACCAAACTTTTTGGCATGAAAAA
AAAAAACCAGAACATGCGGCATATGATTCAGCACCGGTCAAATATAGCAGCCCACTGAACATATTTTGACCCAACAAATTAATCCGGTAATACAGTCAAC
AGAATCCCAGCAATCTCAAACATAGTAGCTTACATGGCAAGGACTTGAGAAAAGAACAGCCAGAATAGATTCAGAAGACCCAGACAACTCGCAACTTAGA
AGCACTTCCGGTGGACAATCGCTGGACCTGACTCATCATACTCACCCTTCGAGATCCACATCTGTTGGAAGGTACTAAGGGAGGCAAGAATCGACCCTCC
AATCCAGACACTGTACTTCCTCTCAGGCGGTGCCACCACCTTGATCTTCATGCTGCTTGGGGCAAGGGCAGTGATCTCCTTGCTCATACGGTCAGCAATA
CCCGGGAACATAGTTGAGCCACCACTGAGCACAATGTTACCATACAGATCCTTCCTGATATCCACATCACACTTCATGATAGAGTTGTAGGTGGTCTCAT
GGATTCCAGCAGCTTCCATACCAATGAAAGATGGCTGGAAAAGGACCTCAGGGCAACGGAACCTCTCTGCCCCAATGGTGATCACCTGCCCATCAGGCAG
CTCATAGCTCTTCTCAACAGAGGAGCTGCTCTTGGCATTTTCCAGCTCTTGTTCATAGTCAAGAGCCACATATGCGAGCTTCTCCTTGATGTCCCTTACA
ATTTCCCGTTCGGCGGTGGTGGTGAAGGAGTAACCTCTCTCCGTAAGAATCTTCATCAAACAGTCAGTTAGGTCGCGCCCAGCGAGGTCAAGACGAAGGA
TGGCATGTGGAAGGGCATATCCTTCATAGATTGGCACAGTATGGCTGACACCATCACCAGAATCCAACACGATACCTGGAAAAACAACATTTATTTCCCA
GCTCAGATTGAAGATGAAGCTTACATTTTAGAATGTGTGTGCTCGCAACGACAATTACCTGTTGTGCGTCCACTGGCATATAGGGAAAGCACAGCCTGGA
TGGCCACATACATGGCTGGAACATTGAAGGTCTCAAACATGATTTGTGTCATCTTCTCCCTGTTAGCCTTGGGGTTCAGGGGTGCCTCAGTCAGAAGTAC
TGGGTGCTCCTCAGGTGCAACACGGAGCTCGTTGTAGAAAGTGTGATGCCAGATCTTCTCCATGTCGTCCCAGTTGCTGACGATACCATGCTCGATCGGG
TACTTCAAGGTGAGGATACCCCTCTTGGATTGGGCCTCGTCACCAACATATGCATCTTTCTGCCCCATCCCCACCATCACACCAGTGTGGCGGGGGCGCC
CAACGATACTTGGGAAGACGGCCCTGGGTGCATCATCCCCTGCAAAACCAGCCTTGACCATGCCAGTTCCATTGTCGCAGACAAGGGGCTGGATGTCCTC
ACCGTCAGCCATTTGATTGAGTGACTCCGGGGATCTAGGGGAACCTGCCCGCCTGAGGGCCTCCCACCGAGATGAGCGGCAGCTGCCGAGAGCGGAGGAA
GAGGATGAGGGGGTTGGTGGCGGCGGTGGTGGCGAACCAGGCAGAGGCAGGCC
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