Japanese | English  
Genome / Development
cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig7773  (registered. 2012)
Contig Information
Length 1958 bp
Clones alternative view 104 Clones [Download: TSV  ,  FASTA ]
Wh_f Spike at flowering date 2
Wh_h Spike at heading date 2
Wh_r Root 1
Wh_CSEC Callus 1
Wh_EM Dormant seed with water absorption 2
Wh_EMI Dormant seed with water absorption after breaking 1
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 4
Wh_KMP Shoot grown under continuous light 2
Wh_MS Seed DPA5 of DT3DL CS wheat 2
Wh_OKCS Seed DPA5 2
Wh_PCDAM Anther at meiosis 2
Wh_RDr Root of dessiccated seed 1
Wh_V4816 Shoot grown under cold condition for 16days 2
Wh_V483 Shoot grown under cold condition for 3days 2
Wh_VABA Shoot with ABA treatment 1
Wh_VHS Shoot with heat shock treatment 6
Wh_VSCB Liquid cultured tissue 2
Wh_VWD Shoot grown with dessication 8
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 2
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 1
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 3
WH_XN Leaves, plant was grown at constant 23 2
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 5
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 4
WH_XT Roots, 18 day old plants were grown hydroponically 2
WH_SP 2
WH_XA Root 5
WH_XB Root 7
WH_XC Root, treated at 50 microM Al for 6h 2
WH_XD Root, treated at 50 microM Al for 6h 12
WH_XE Seedling, infected with leaf rust 7
WH_XF Seedling, infected with leaf rust 3
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 3
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|242036895|ref|XP_002465842.1|| hypothetical protein SORBIDRAFT_01g046840 [Sorghum bicolor]
Score 1129
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig7773
TTTTTTTTTTGAAAAGATACAGATGAAAATAACTGGCAGGTAACGAATATCAGTGCATCCCAATAATAATTTTTTAAGTACATAGTTTGACCGTGTCTTG
CATACCAGAGCAAAACATAACAGTATACGAAGGAAATCACGGGTAAGTCGATGGCACAACAACGAGAATTTAGCTATATAAGTCGTCATCTTCAGCTGCT
GCGGCAGCGGATGCAAAAGGGTCCGCGGCAGCAGCAGAGGCGGCGCCCGCGGCCGGCTGATCAGGGAACCGGAACTCGCTGCCGAATCCACGGGACTGTT
GCAGAGTCTGGGCAAAGGCCTGGTACTTGCGGATGTCTGCATCGCTCACACTCCTGCGTGCATACTTCATCGACTCCTCAAAGTGAGCAGCCCTGATCTC
AGCGACCTCATCCACCTCATCCTCCTCCATAGCTTCAGGGTTGTCCTTCCTCCGCCTCTCCCTCTCGATGTCCTTCTCGATGTTCTCCCTGATGGCGTAT
TTGCAAGCACGCTGGCAAATTTCTGTGATATCAGCACCGCTGAACCCTTGGGTGTACTTGGCCAGAGCACTCAGATCAATATCCTTGGCCAAAGGAGACT
TCCTGAGGCAAGCCTTGAAGATCTGGTGCCTCGACTCGACATCAGGAAGAGGGATGTAGATAAGCTGATCAAGACGCCCTGGCCTCAGCAAGGCAGGGTC
TATGATGTCTGGCCTGTTGGTAGCACCAATGATGAAGACAGTTTTCTTGGCGTTCATGCCATCCATCTCAGTCAATAGCTGGTTTAGCACTCTATCAGCT
GCACCTCCAGCATCCCCAACACTGCTTCCTCTCTGGGTGGCAATAGAGTCAAGCTCATCAAAGAAGAGGACACATGGTGCTGACCCTCTAGCCTTGTCAA
AGATCTCACGCACATTAGCCTCGCTCTCACCAAACCACATGGTAAGCAGCTCAGGTCCCTTGATACTGATGAAGTTAGCCTGGCACTCATTTGCAATTGC
CTTGGCCAACAAGGTTTTACCACAGCCAGGAGGGCCATAGAACAGAACACCTTTGGATGGAGACATGCCAAACTTCTCGAATTTCTCTGGATGCTCCACA
GGGTATTGGACAGTCTCCTGCAACTCCCGCTTGACATTCTCCAGACCACCAATATCTTCCCAAGAGACATTGGGAACTTCAACAACAGTTTCACGGAGAG
CAGATGGGTTGCTTGTCGTTAGTGCAGTCTTGAAATGGTCGTTTGTCACAGCCATAGAATTCAGTATCTCAGCATCTATGGTCTCATCCTCAAGATCTAT
AATATCCATCTTCTCACGAATGCACTGAAGAGCAGCCTCAGTACAAAGAGCAGCAAGATCAGCACCAACATACCCATGGGTGTCTCGAGAAATGTGTTCC
AGTTCAACATCTTCAGCTAACTTCATGTTTTTGGTGTGAATCCTGAGAACTTCAAGGCGGCCAACTTCATCAGGGACTCCAATGTCAATCTCACGATCAA
ACCTACCAAATCTTCTGAGAGCGGGATCAATACTGTTTGGGCGGTTTGTAGCACCCATAACAATAACATGCGCACGGGACTTAAGCCCATCCATAAGGGT
CAACAGCTGAGACACAATACGCCTTTCAACTTCTCCATTGGTCTTCTCTCTCTTTGGGGCTATTGAATCAATCTCATCAATGAAGATGATTGATGGTGCA
TTCTTCTCTGCTTCTTCAAATGCCTTCCTGAGATTGCTCTCACTTTCTCCTGCTAACTTGGACATAATTTCTGGGCCATTGATCAGGAAGAAGAATGCGC
CCGTCTCATTGGCAACAGCCCTCGCAATAAGGGTCTTGCCAGAGCCAGGTGGTCCAAACAGCAATATGCCCTTTGGAGGCTTCACACCAATAGACTTGAA
AAGTTGAGGGTGACGCAGTGGGAGTTCAACCAGTTCTCTGATCTGGGCCATTTGCTTC
page-top